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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0534300 |
| Transcript ID | LotjaGi3g1v0534300.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-acyltransferase; TAIR: AT4G15080.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q8L5Y5|ZDH17_ARATH Probable protein S-acyltransferase 19; TrEMBL-Plants: tr|I1LPE3|I1LPE3_SOYBN S-acyltransferase; Found in the gene: LotjaGi3g1v0534300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:95117668..95122220) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCAACTAATTTTTGTTGAAATTGTTGGTTCTTACATGAATAGGTTGTTGCAATTACTGTATTCTGCTTGTTGGTGAT TGCTTTTTATGCTTTCCTTGCTCCCTTCATTGGAGGTCATATATGGGAATACACCTTCATTGGTGTTTACTCTCCTGTGG TATGTAAATGGCCTTTTCAATCCGACTCATTCATTATATAGTATTTACTTACCTACAGGAGGCAGGGCTTATGTTGTTGT CTCATTCCTGTCGCCTTGCAGGCACTCACTGTTTTCATTCTCTACGTTAGATGTACTGCAATTAACCCTGCAGATCCTGG CATTATGTCTAAATTTGACCCTAGAGTGGGAAATAAGTTCAATTCTTCCCATGGTTTATTGGGGAAGCATCAATCTTCTG AACATGATGGGAACACTGCAGGAGAGCATTCTTCTCCATCATCTGCGGCTTCTAAAAGGTCTATGACAAATATGAGCAAG AAAAGCTCAGTGGAAGATCTTGAAAGAATAGATAGTTCAAGAAAACACAATGAGCAAAGCTCATGTGATGTAATTGGAGG AATTTTCTGCATAATGTTTTCACATGAAGATTGCCGGAAACAAGAAGTAACAGCTGATGAGCAAGGTGGTGGAGAAGATG CTCTGTTCTGCACTTTGTGCAATGCTGAGGTATTACAGTGTCATTTGTGGCCTTTTGACACATTGCACACAATATTTGAA TTTCAGTTCCTCCATTCCTAGTCAGCTTAGCTGTAAGTGATATCTATTACATTTTCTTTTACACGTGCATTCCTATGAAT TGTATATACGGATTTGAAGTGTACAATAATAAACCATGGGTTCATTATGAATAATAATAATAATAAACTATGGGTTCATT ATGAATAATCTTTAAAATTAGACTTTTGAACAGGTGGCTTGATTTTTTGAATTTCTTTTTGTGCTTCTTTTGGCTAAGTT TTGGTTTTGATGAATTTTTTTTATTCTTTCAATTTCTTCCTTTTAAGAACATCTAGCTCTTATGTATTTTCTTCTTGTCT TGAATTTCTCTCATCTATAAAATTATCCTGGCCAAAATTTGTTATCTATTTGTAGTCCTAATTCTTGGGGCTTCCAAGAT GCTGCTGAATTATGAACCCTTCTTGGAATTTTTTTACACACGTTCATACAAACTTGGTTCATAGGGATTCTGGTGAATTA TGAGCCCTTTTGCTTTTACTCCTTCATCTATTTCTGGAAATTCCTGCCACTAGAAATTTGGACTGAATTATGGTTGCTCT AATTTTATAAAAACCTGTGGTTGCATGCAGTCAATTTAGGCATTTGAGAAAACCTCAAATTAGATTTCCGCTTCTCGCTC AGTTTGTATATTTCATGCCCTTTGTTTCCCATTTTGCAGGTTCGCAAGTTCAGTAAACATTGTAGAAGTTGTGATAAATG TGTTGATGGGTTTGATCACCATTGTCGGGTATGATTTGTATGCTGAGTGACAGCTTACAACTTGTAGTATTGTTGAATTG TGGTATAAAACTTTCATGATTTCTTTTCAACTTTGAGCTTCACTTGATACATCACATTGCTGCAGTGGCTTAACAATTGT GTGGGTCAAAAAAATTACAGCTCTTTTATTGCTCTCATGGCATTTAGTCTTACATGGGTACGTATATAGGTCCACAGAAA TTATTTATTACTTAAAAGCAATGGTTTGCTTCATTTACTAATAATACCTTTGGTCATTGTTCTTCTATGTTTCAGCTTGT TATCGAAGCTGGAGTGGGTATCGCTGTTTTGGTGCGTTTCTTTGTTAACAAGAGAGGAATGGAATCTGAAATTATTGATA GACTTGGAAACGGATTTTCTCGCCCCCCATTTGCAGTTATTGTGGTATCACTTTTATTTATGTTTTATAGTAAAATCTGG CATATGGCAAATGGTGATATTATTAACTATATTTGAGATTTTGTTATGTTACTTGGTTCAATGTGTGTAGGTTTTAAGTA CTGCAGTTTCTGTCTTGGCTTGTGTGCCTTTGGGTGAGCTTTTCTTTTTCCACATGATACTGATCAGGAAGGTCAGTAAT TCAGTAGCTGAAAATCTGTGGGTTTTCTGTTGTTCTTTTTTCTTCCCCACCCTAGACTGCTTGGCACATATCATTTGATT GAGGGGTCTCTATGCATTGGATCTTAAGGTGCATATGGTGGAGTTTTAGCAAATTTATTTAGAAACAAAATATCATTTTT CGACGGAGTTTGTATTCAATTTTTTTTCTATTTTAATTGAAATCCATTTACTGGGAAAAGAAAATAATAGTTTAGCACTA CGTAAAACTGTTATGGGAGAAGCTTCAAAAAAGTGATTTTGGCTGTCTTAATTTAATTGTCTCCTTATAGGAACAAAAAA TAGATGAGGGTAAAACATCCTCCTAAATAAAACAGAAGTATACATGATGCAAAGAATGAAATAAGATGCGGCGATGTCTG TCCTAGAAAATAATTTTTCATGCTTAGTTACAGAAGCATTTTGGTGATGTTTGCCTGGATGTTTTGCGTCCACTCTGAGA TCTGTAGATCACTATAATAACTAGCTTTTAGTTTCTGGCCATAATTTTAGTCATTTCACACACAGTGTTATTCTCATTTG CTCTTCTTTCTTCCTGTTGGATCAGGGCATCACGACCTATGAATATGTTGTAGCAATGAGAGCCATGAGTGAAGCACCTG CAGGGGCATCAGTGGATGAGGATTTGCCAAATGTACTTTACTCTCCAACCGGATCAGCCACAACTGGACTGAGTGGAGGA AGTTCTCTTGGTTTGCAGTATAAAGGGGCATGGTGTACACCTCCTAGGGTATTTGTGGATTATCAGGTACTGTTCTGTTT TTCTTTAGGAAAGGTACTATTCTGTTATTGATTGAACTAAAAATGAATGTCTTAAGAGGAGTGCTAGCAACACACCCTCT CCCACACTTCTTATGATTGGTCTGTTTTCAAAATAGTCAATATATTTCTCACATTAAAAAATGTTGACTTCTTAAAAAAT TAACCAATCACATGAAATGTGTTGAAGAGTGTGTTGCTAAATTTTTCATGTCTTAATTAGGTTATGTAAGAGAAACGGAT GATAGAGTGAATAGGAAGAACAAAATGAATGGTGGGACAGATGAACTGTATATTCAATGATGTTTGCTGCAGCGACTAAA TAATAAAGGGGTTGCTACGTGCAATCCCCGTAGAAAACCAAATCATGATGGGACAAGTAATTTTACGAATTTAAAAAATG AAATTCTCATTGATTTGCCTTATTTGCTAATTTTCACGCCTTAATCTATTGAATTTAATTTTAAACATTATGACATGCTG CTAACCCTTTTTTGAGTGTCTTTCTTGACAAGGAAAGAGACTGTTTTTGTTCTTAAAAATATTTTTATGGATTGATTTAT GGGGCTTGCCTTAAACATGGGTTTTAGGAGGAAGTCGTGCCTCATTTGGAGCCAGGAATGCTACCGTCAACTGTTGATCC AGATGCAGCTGGAATTGCAGAAAGAGGTGAAAAGATGCCAAAAAGGCCTGTTCGTATTAGTGCCTGGAAGCTTGCTAAGT TGAATTCACAAGAGGCGATGAGAGCAGCTGCCAAAGCCAGGGCATCTTCTTCAGTTTTGCGACCTGTAGATAATCTCCAT CACCCTGATGCAGAATTAAGCTCTAGTGGGAGCATGAGAAGTAGTTTGAGCGCAGACACCGGAACTAATAAGGAAATAAA ACATGATTTGAGATTGTCTCCAGTGAGGAATTCTATTGCTCCTAGTCAAGGAAGCCGTGATGAGTATGAAACTGGAACCC AAAGTATGAGTAGTTTCAGCAGTCCAACCCATGTTCAAGAGGCAGTTACACTCAGCCCTCTTCCACAGGGTCACAGTTTG GGTGGCTTCAGGGCAGTTACATCAATTCCTAGTGTGGTGCCTGAGCGTCCTCTACCTTCGAAAGCAACATTATCAAACTT CAGGAACCCAATATCTAATCCTTCTCTTGGATTTGATGGAAGAGTGATGCCAAAGGTAATCAGTAACGATCCGTTATTGC TTTCATCTTCTGGGACATCTATTCTAAGAGACATGAAACGGACATCAGTTGTTTGGGATCAAGAAGCTGGCAGATATGTG TCGGTTCCTTTATTGCCCTCAGAAGCTCGAAACAGGTCATCCGTGCGAATAGAATTGCCAATTTCAAATGCTGAAACAAG CAGTATTGGAAGAAAACCAGTGATTCCACCGCAGGACTTGTCATCGTCTGCACACAAAACACCAGGGCAGCATGCCCAAA ATCTGACGTATACAGGAGATTCTATCTTTTTTGGTGGTCCGTTTTTGAGTGTGCCTGCTAAGGATGGTTTGAAAAATGAA AGACATCAAATGTCCGCAGAGGCCCAAGATAGCAGAACAGTAAACTTGCCCCAAGAGTCAAGATCTAAAAGGGATGCGGT TTCGAATCAACTTCCCGTGTTTGTTCCTGGCAGTTTTGACAATATGCTTCAACCTCGGTCTAGCAAAGATTAG
CDS sequence (LotjaGi3g1v0534300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTAAATTTGACCCTAGAGTGGGAAATAAGTTCAATTCTTCCCATGGTTTATTGGGGAAGCATCAATCTTCTGAACA TGATGGGAACACTGCAGGAGAGCATTCTTCTCCATCATCTGCGGCTTCTAAAAGGTCTATGACAAATATGAGCAAGAAAA GCTCAGTGGAAGATCTTGAAAGAATAGATAGTTCAAGAAAACACAATGAGCAAAGCTCATGTGATGTAATTGGAGGAATT TTCTGCATAATGTTTTCACATGAAGATTGCCGGAAACAAGAAGTAACAGCTGATGAGCAAGGTGGTGGAGAAGATGCTCT GTTCTGCACTTTGTGCAATGCTGAGCTTGTTATCGAAGCTGGAGTGGGTATCGCTGTTTTGGTGCGTTTCTTTGTTAACA AGAGAGGAATGGAATCTGAAATTATTGATAGACTTGGAAACGGATTTTCTCGCCCCCCATTTGCAGTTATTGTGGTTTTA AGTACTGCAGTTTCTGTCTTGGCTTGTGTGCCTTTGGGTGAGCTTTTCTTTTTCCACATGATACTGATCAGGAAGGGCAT CACGACCTATGAATATGTTGTAGCAATGAGAGCCATGAGTGAAGCACCTGCAGGGGCATCAGTGGATGAGGATTTGCCAA ATGTACTTTACTCTCCAACCGGATCAGCCACAACTGGACTGAGTGGAGGAAGTTCTCTTGGTTTGCAGTATAAAGGGGCA TGGTGTACACCTCCTAGGGTATTTGTGGATTATCAGGAGGAAGTCGTGCCTCATTTGGAGCCAGGAATGCTACCGTCAAC TGTTGATCCAGATGCAGCTGGAATTGCAGAAAGAGGTGAAAAGATGCCAAAAAGGCCTGTTCGTATTAGTGCCTGGAAGC TTGCTAAGTTGAATTCACAAGAGGCGATGAGAGCAGCTGCCAAAGCCAGGGCATCTTCTTCAGTTTTGCGACCTGTAGAT AATCTCCATCACCCTGATGCAGAATTAAGCTCTAGTGGGAGCATGAGAAGTAGTTTGAGCGCAGACACCGGAACTAATAA GGAAATAAAACATGATTTGAGATTGTCTCCAGTGAGGAATTCTATTGCTCCTAGTCAAGGAAGCCGTGATGAGTATGAAA CTGGAACCCAAAGTATGAGTAGTTTCAGCAGTCCAACCCATGTTCAAGAGGCAGTTACACTCAGCCCTCTTCCACAGGGT CACAGTTTGGGTGGCTTCAGGGCAGTTACATCAATTCCTAGTGTGGTGCCTGAGCGTCCTCTACCTTCGAAAGCAACATT ATCAAACTTCAGGAACCCAATATCTAATCCTTCTCTTGGATTTGATGGAAGAGTGATGCCAAAGGTAATCAGTAACGATC CGTTATTGCTTTCATCTTCTGGGACATCTATTCTAAGAGACATGAAACGGACATCAGTTGTTTGGGATCAAGAAGCTGGC AGATATGTGTCGGTTCCTTTATTGCCCTCAGAAGCTCGAAACAGGTCATCCGTGCGAATAGAATTGCCAATTTCAAATGC TGAAACAAGCAGTATTGGAAGAAAACCAGTGATTCCACCGCAGGACTTGTCATCGTCTGCACACAAAACACCAGGGCAGC ATGCCCAAAATCTGACGTATACAGGAGATTCTATCTTTTTTGGTGGTCCGTTTTTGAGTGTGCCTGCTAAGGATGGTTTG AAAAATGAAAGACATCAAATGTCCGCAGAGGCCCAAGATAGCAGAACAGTAAACTTGCCCCAAGAGTCAAGATCTAAAAG GGATGCGGTTTCGAATCAACTTCCCGTGTTTGTTCCTGGCAGTTTTGACAATATGCTTCAACCTCGGTCTAGCAAAGATT AG
Protein sequence (LotjaGi3g1v0534300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKFDPRVGNKFNSSHGLLGKHQSSEHDGNTAGEHSSPSSAASKRSMTNMSKKSSVEDLERIDSSRKHNEQSSCDVIGGI FCIMFSHEDCRKQEVTADEQGGGEDALFCTLCNAELVIEAGVGIAVLVRFFVNKRGMESEIIDRLGNGFSRPPFAVIVVL STAVSVLACVPLGELFFFHMILIRKGITTYEYVVAMRAMSEAPAGASVDEDLPNVLYSPTGSATTGLSGGSSLGLQYKGA WCTPPRVFVDYQEEVVPHLEPGMLPSTVDPDAAGIAERGEKMPKRPVRISAWKLAKLNSQEAMRAAAKARASSSVLRPVD NLHHPDAELSSSGSMRSSLSADTGTNKEIKHDLRLSPVRNSIAPSQGSRDEYETGTQSMSSFSSPTHVQEAVTLSPLPQG HSLGGFRAVTSIPSVVPERPLPSKATLSNFRNPISNPSLGFDGRVMPKVISNDPLLLSSSGTSILRDMKRTSVVWDQEAG RYVSVPLLPSEARNRSSVRIELPISNAETSSIGRKPVIPPQDLSSSAHKTPGQHAQNLTYTGDSIFFGGPFLSVPAKDGL KNERHQMSAEAQDSRTVNLPQESRSKRDAVSNQLPVFVPGSFDNMLQPRSSKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 65 | 65 | - | – | |
| Phobius | 1 | 115 | 115 | - | – | |
| MobiDBLite | 30 | 53 | 24 | - | – | |
| PANTHER | 64 | 115 | 52 | 3.4E-92 | – | |
| PANTHER | 64 | 115 | 52 | 3.4E-92 | – | |
| PANTHER | 116 | 374 | 259 | 3.4E-92 | – | |
| PANTHER | 116 | 374 | 259 | 3.4E-92 | – | |
| Phobius | 116 | 132 | 17 | - | – | |
| TMHMM | 116 | 133 | 18 | - | – | |
| Phobius | 133 | 152 | 20 | - | – | |
| Phobius | 153 | 178 | 26 | - | – | |
| TMHMM | 154 | 176 | 23 | - | – | |
| Phobius | 179 | 613 | 435 | - | – | |
| MobiDBLite | 312 | 387 | 76 | - | – | |
| MobiDBLite | 327 | 344 | 18 | - | – | |
| MobiDBLite | 359 | 387 | 29 | - | – | |
| MobiDBLite | 511 | 536 | 26 | - | – | |
| MobiDBLite | 562 | 613 | 52 | - | – | |
| MobiDBLite | 571 | 590 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0534300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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