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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0539900 |
| Transcript ID | LotjaGi3g1v0539900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT5G16650.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|A7IC67|DNAJ_XANP2 Chaperone protein DnaJ; TrEMBL-Plants: tr|I3SGT5|I3SGT5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0539900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:95716994..95722205) extracted from Lotus japonicus Gifu genome v1.2.
ATTACAATTTGAAGCTATCGGATATTACACGGTGGTACGGTGAACATGCCGACGCGTAACATTACAGACAACCTGAGAAA ATCCGAAAACGCAATCCGAATTTCCCAAAGAGTGGTATAGGATTTATGCTCCCTTGTCCGCACAAATTCCCGAATTCCGA TTTTGTTTTCATTTGAATCTCCGAATTTTTCTAAGATTTGAAGCATTTTGCTCTTCATCGTACCGTTTCCTTCATCCGAG GTTTGTGTCGGATCCCCATGAATTATGTAAAAGAAGCTGCGCATGTGGACCCCATTTTTGTTGCGCATGGCTGCTGCTGA ACAAACCAACCCCAACAAGGTATTGGAACCTATCCTAGGTTTTCTATCTTCTTCTCATGTGATTTTGTTTCTGCTCTTTT GGTTTCTGGGAAATGTTATTATACTGAAATTGAATTTGACCCATTTGCATAACCGACTTGTTGTATATGAAAGTTTAATT TTTTATTTGAGTTCATCTAGGAAGCTTAATGGTGAGGCTCTTTTGTTGAAGAAGTGGACTAGGTACTAGTGAAGTCATGT GTTTGAGTAGAATGTAATTTTGAGTTAGGGGTCAGAGGAAGAAACAGTTTTGTGCTAACCTGCACTGATTTCAGCTGTTT ATAGGATGGAAAGGCAAACTGCTGAAATGAGTAATTCAAGTCTCCGCCCTTGGTCAATAGGGTAGCTAGGTTTCTTACAG ATTGTTGTCATGTGTTAAGTGTGTGTTTAGATACCAATTGAGCATAGCATCTAAGAATTCAGGTTAGACTTAGGCCTCCT AAATTTTAATATGGTATTAGAGCCTATCATAGTTCCATTTATTGGAGAGTTCACTCGCAGATGTTCATTTTTGCATATCA CACGCTCCAAATGTCCAGCCCTGGGTGTGGGGATGTGTCGAGAAGTCCCATTGACTAGAGATATGGCCAAAATAGTCCTT ATATCTAAAGACAATGTTAGGCCTTTTATAAGCTAGCTTTTGGGATAGCATGATGCCTCCCAAATTGTAATACAACGTGA ACGAACTTTTATCCCAAATTCTCTGTGTGTTTGGATACCAGAGGTTTTATCTAAATCCATAAAAATAATTCTCTTCACTT TTTGTCTTGGAAGTGTCTATAAGAAGAGTTTTTTTTTCACTTTTTGCTTTGATAGGTGTGCTAACATTAAATTGTACCGG AAACAGGGGATATACAAACATAATCTAAGTAGGTGTTTTGATTGGCGGTAGGTAGGTTTTCACTAAAAAACTCAAAATCA TGTTGGGGTAGAAGCTACTGTAACTTCTAGAGGGAGAAAGTTGATTCAAAATCTCCAAAAGCTAATCCTAACCTATGTTG TCAACCCTGGCAAGATCTCTCGGGATCCCGCTGCGGCAGAAAGGGTCTGGCATTGTTGAAAACATCCTCTAATTTTAAAT GTTGGGGCTGTTTTTAGGGGCATTTCAGGGTTTTTGCAATGAAATAAAACCTAGATGGGAGGAAGAGTTCGACCTCTCCT CACTTCACCATTGCTCTCTCAGACTTTTAATGCTAGTTTGCTACTATGAGAGTATGAATATGTTATGAATTTTAATGCTC TCTCAGACTTTTAATGCTAGTTTGCTACTATGAGAGTATGAATATGTTATGAATTTCAAGTAATATTTATCATTGATTTA GTATTTATATATATATAGGTATAAATCATACAAAATATAGACAAAAAAAACTTTTTCTCAGCAATCCCACTCTCTGCTGT CTAATTTTTGGGGTCGGCTGCTACTCGCTGAGATCTGGGATTGACAACATAGATCCCAACACACTGTGAGTTGGTCCAAA CAAGTGTAGCAGAAGCTGGTTTATATATTAATTGAATCATATTGTTAGTTGATGCTGTGGTTCATAATTCTTTGGAGCAT TTTCTGAAACTTGTCTCTGGGTGCAACACAATCTTTCTGGTGATATTTATATATGATTTGGTTTTCTTTGCTTTCTTAAA ACTGAAAATCTATGTGTAACTTTCCTTTTGGCGATCATGACTGACAATGTAATCATTGATGCTCCAAAAGTAAATGTTAC TTGATGAGGAGAAAATGTCTGTGACTCTTTTTATCTTTTATGTGTTCTTGATGGGTCGCTTTTACTTATTTCAAGGATTA TTACAAAGTGCTGGAGGTTGATTATGATGCAACTGATGAAATTATCAAATTAAGTTACCGAAGACTCGCAATGGTGTGTA ATTGCCTTTGTATTTGCTCCTGCTAGGGCTCTTGTCATATTTTTTCAAAATGAAAAAAAATTAACGTTTTACTACTTATA TACATATGACTCTACTCCATTTGATAGAAGTGGCATCCTGACAAGCACAAAGGTGACGGTGACGGTGATGTTACTGCAAA ATTTCAAGAGATAAATGAAGCTTACAATGGTAATTCTTTCATGGATTTGTAAAAATATGTCATACTTCTTTTTCCATGTT AGCACATCATATAACAAGCTTCATTCTTCTAGCTTTGGTGATCACCTGTATCAATGCAGTTCCTGACAATGGAAAATTTC TTATTCTATCTTTAACACAATCATAATATATAAATAATGAGAGTAAAAGTACAAGTAATTGTAAGCACAAAGGTTGTGAT CACTCATTAATTTGGAAATTGGTCGTGTAAAAGAAATTGCTTCAAACTTAATAAGTAGGTCTGCAATTGATACTTAATGG ATTAGAGTTACTCTTTAGCCCCACATAGTTTGACGGACCTAGATGTGTGTTTCTGCTGCATATGGCCATGGTTTAGAATA CAGGAAGCTACTGCATGTATTTGATAATCTTGAATTTTTGTTTATTATATTTATAATCTTTCTTTGTTATTTATTAGTTT TGAGTGATCCTGCCAAGCGTTTGGACTACGATTTGACTGGGACGTGTGAGGTTGAAAAGTATAGTTTGCAGGTATGCAAC TCAGATCTCATTAAATGTTTAAGAATTATTTACATGGATCTGTTTATGATTGTTTCATTATATCCTCCTAATGATAATTG CTGCTGTGGACTTATTTGGTCGGCATTTCTCATTTTTATACAGGAATATCTTGCTAGATTTAAAGGAATGATTCTTACCT GCAATGGACTTGGTATCAATCATGCTGACAGATGGTATTTGCTTTTAATCTTTTTCCTCTGTCTTTCTATTTGTCTCTCT GTACTGGATAGAGAGTTATATAGTTGGTTCTTTCCACACAACCAGATGAACTTTATTATTATTTTAAACCCATCATTTGC TTCAGACATTCTTTTGTATGTCCGTGGTAAGTTTTAGCCATTATGTGGGAAGGTGTCGAGTTATTTTTGAATTTTAAGTG AACCAACAGAATTTTCGATAAAATGAGGTAGGATGTAATTTAACAAAGCTGTGCTTAAGAAGTTTGATAATTTTTTATGC CTTGCCTTTACATGATACTTTCGGATCCAGCTTGATCTCAAACTACCATGTTCTTAAGAGCTACTCAAGTCTAGGTTATG TGATACTAATTTCTTGTTTTAGATTTTTGCCCATATGCAAATTCATGTATGAGGAAAAGCTAGTGTTAGAGTTGACATTT GTTGAGTCTGATTGCGTTCAAAGAATTTCCTGCTTGTAGGTCTGATAAGAACCTTGGGAACCATACCACAATAGCTAGCT GTTGTAGTTGGTGAGCCCAAGACTTTAACCCCCCCCCCCCCCCCAACTAGAATCTCATACTTCCGATGTGGGACCCAAGT CCCTTGCAAGTGGATCCTAACACGGCCACTGGACATTTTATGATTTCTAATTATATGCACATTTTAATGGTGTCTCTGTC ATGTTTAACGCCAGTCAATTCAACAAGGGAACTTCATTTGGAGAACTTAGGAGACATGTATCTCTTTTGTTGGATTATGT CTTAGGTTGGACACTTTGGAACCAAATTGCTACTTGAGATCTTTCCTTAATCCATTTTAACTCCATAGCTCCTTCACTTC CTAACCGACTAAACCAAAAATCACTTTGTGATTCGTTACTTTTGCATATGCTGTTCACAGCCTTGAAATGGCCTAAATTC AGCCCTTGATTGCTTTCTCTAGGCCTACTTACTGAACATCTATTATTGTAAATGGACCTGCTATATATCTGGTGTGAGGT GTCAGTTTCTTCTATATTTTATTTAACTCTTATCCTACTAACCTGAACTTTGATCTTGTGGAATAATCCAGGTCTCAACA TTTGATTGAAAATTTTGAATCCGCGGATGAATAAGGTTTATCGTTTGCACTGTTTCAATTTAAGGTCCCTTGATTTTGTC CACTGCACCAGTAGATGTCTTTCTAAATTGATGGAAAAACATTCTTATCAGGAATCCTAATCTCAGTTTTGGCCAGCAGA GTTTTGGATAAAGATACCTGAAAATGGATTTTTTGTGACAACTAGAGGGTGTGCTATGTGGGTAGCCTAACCCTGCCTTT AAATTACACTCCACCAAGTTTCAGAGATTTGAACCCTCCATTATTCAGTACCCTATGATCAATTGGCGATACCTGAACAA ACTGGGGTGATTGTAATATATTGTGATATATGTAGCATACATCAACATTGCCTTTCTATCATTTAATAATTAAAATGCTA GATTAGAAATTTAGAATGATCTATTATTATACCATAGATCAACTGACATGGGGTTGTTTTACTTTTATCATTAGTCTCGA GTTTGAGTTCCTCTTAATACAGCTAAATACTTCGTAGAGAGAATTTTATCGCTCATAGCGATCCTACCCGACTCGAAAGG ATTGTATCATTACATGTGGTTTAAACTAAAAAAAAATGATCTATTATGAATTTACAAGTCCTAGTATTAGTTTGTTGACC TGATAGTTGTTTCAATGCCTACCAAAGCAAGGAGAAATGGTTGAATTGAATGTTTTTTGTCTGGGCTGAATGCGGGTAAA CAAAAGCAAGTGAAACTTTTGATAAATGAAGATCAACAACACTAAACATTTAAAAGTGCAACTAATAATTAATTACAAAC TGTATAGTTTCTGTCAGATTGAAAGTTTGTCACGTATAATATTTCATCACGTTATCACCGTTTTCTGCCAAAAGTGGATC TCTAATGAGTTTCAACAACCTAGAGATTTCCGTCAAAAACAACCTAGAGAGATTCAAGCAATCCAACACTGTATTTTTTT TTTTTTATCAAC
CDS sequence (LotjaGi3g1v0539900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGACCCCATTTTTGTTGCGCATGGCTGCTGCTGAACAAACCAACCCCAACAAGGATTATTACAAAGTGCTGGAGGT TGATTATGATGCAACTGATGAAATTATCAAATTAAGTTACCGAAGACTCGCAATGAAGTGGCATCCTGACAAGCACAAAG GTGACGGTGACGGTGATGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTTTTGAGTGATCCTGCCAAGCGT TTGGACTACGATTTGACTGGGACGTGTGAGGTTGAAAAGTATAGTTTGCAGGAATATCTTGCTAGATTTAAAGGAATGAT TCTTACCTGCAATGGACTTGGTATCAATCATGCTGACAGATGGTCTCAACATTTGATTGAAAATTTTGAATCCGCGGATG AATAA
Protein sequence (LotjaGi3g1v0539900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWTPFLLRMAAAEQTNPNKDYYKVLEVDYDATDEIIKLSYRRLAMKWHPDKHKGDGDGDVTAKFQEINEAYNVLSDPAKR LDYDLTGTCEVEKYSLQEYLARFKGMILTCNGLGINHADRWSQHLIENFESADE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 8 | 104 | 97 | 1.2E-27 | ||
| PANTHER | 10 | 126 | 117 | 4.9E-64 | – | |
| PANTHER | 10 | 126 | 117 | 4.9E-64 | – | |
| SUPERFAMILY | 17 | 108 | 92 | 1.7E-27 | ||
| SMART | 19 | 79 | 61 | 1.9E-25 | ||
| Pfam | 20 | 84 | 65 | 1.6E-24 | ||
| CDD | 20 | 76 | 57 | 5.01026E-22 | ||
| ProSiteProfiles | 20 | 87 | 68 | 20.236 | ||
| PRINTS | 22 | 40 | 19 | 7.4E-19 | ||
| PRINTS | 40 | 55 | 16 | 7.4E-19 | ||
| PRINTS | 59 | 79 | 21 | 7.4E-19 | ||
| ProSitePatterns | 64 | 83 | 20 | - | ||
| PRINTS | 79 | 98 | 20 | 7.4E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0539900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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