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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0541200 |
| Transcript ID | LotjaGi3g1v0541200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Impaired sucrose induction protein, putative; TAIR: AT4G27750.1 binding protein; Swiss-Prot: sp|P36589|CDC14_SCHPO Cell division control protein 14; TrEMBL-Plants: tr|I3SWM9|I3SWM9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0541200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:95822456..95825430) extracted from Lotus japonicus Gifu genome v1.2.
CACCCTCCATCCACTGTTTGACCATCGCCGACCACCTGCCTTTTCCCTCACCACCAGATCTACGACAACCAAACCCGCAT TGGCAACCAATCCATCAAGAGCTCACCTCTTTTTGCCCTATCACCAGATCTGCGTGTGACCTTCAGCCTCCTCAGATCTG CGACCATCGATCTTCGATCCAAGGCCCTTGACCTCAGATCTGCGTCCCTTGACTTCATATTTGCGACCCTTGGCCTCTTC ACCATCACCCGGAATCACCCCGCGCCCGCGGTCGTGGGTCACCGCCTCCCCCCCGAGACTGTGTTGTTGTGCTCTCCATC TCGTTCCAAGGGCTTGCCTCTACTATTCTCGGTTCTTGGTTTGGTGGCTCTTTAAGAGTACCACTTGTTAATGACAACCT TGATGTAGGTGAATTTTTGCTGTTCCGTCAAAGTCGGCTTGAGTATTAAAAAAGCGACACAAAATTATAAAAGATCAAGA CTTGGATAGTGTTTTAGAGTTTGCTTTTTTTTTTGTTCTTGTTTGACTTGGATTACACTATATCAGAGCATTCTAGCTTG TTATGTATTTTGTAATTGCGGTGCTATGTTGCATGTGCTCTCTTTAAGGGTTGATTTCCTTGACTTGTAAATGCCGTGTG ACATGACTTAGGCCTTAATCTTACGAACCGTTGATAAAAATATATGAAAAATAAAAAAATGTAAAAATTTGGTATATAAA ATTAATTTTAGTAAATAGTAATCCTCGTAAAGCACTAGGTTGTTTATTGAACCAAACAAAACATAGCGTTACTACGTTAG GGTTCTTGACAAACTCAATTCTTGTTCAATTTACCACCACAACTCAATTTGGCAGACACAACGTGCTTCGTATCTGATCG ATTACCCTGGTGAATTCAATTGTGCGAAAGAGATGTACTTGAAGAAGCCACTATGGAGTGAAGGGATTGAATCGGATTCA GATGGTGCGGTGGTTGAGGTTGTGAAGTCGCTGCAGCAGCAGAGGGTGTACAGAGAAGTGACTCTCGCTCTCAGGACTGG CCTCAGAGACGCGCGTGCTGAATTCTCCTTCCTCCGTGTTCGCGCTCTCCGTTCCATTCTCAATTTCCTCCGTTCCGTTG CTGACTCTGACTCCACCATCGACCTCTTCAACCAAACCCAATCAATTCCCGAACTGCAAGGTGAAGTGTGTGTGTATCCT TCTTTTGAATTGTGAATTGTGAATTGTGAATTGTGATTGATTGCTATTTTGCTGTTTACAGTGGTTCCGGTTCTCTTTCA GCACTCACTAAAAGAGACAGGGGAAGATTACACTGAAAATAGGCTAGGAGATTTGACTCATATACTTGGTGTGGAAGTGG AACCCATCAAGTTAACAAGTCCATCTACAGATCATGAAGTTGCACTCGCGCTTAGAGTCTTGGAGGGTTGTTGTTTGCTT CACCCGCAGAGTACTGCTCTTGCCCATCAACACAACGCTATTCAGGTTGTAAAGGCTCAACTCTTGAGCTAGCTTTTGGG TTGAGTTAGGCCTTCCAAATTCTAATAATAATAAAGAAGCTGCTAGATACTGACTTATCTTGCTTCTACCTCTGCAGGTT TTAATGAATATATTATCTAATCGTGGAGTACTTGAGCAAGGTGCATGCTTAGATGCGCTAATCTCATTGATGGTGGATTC CTCGCCCAATCAAATGGTACCTCATCTTGTCTTTACATAACATAACTTGCCAATAATTTTACATCTCGTCTCTCATCTTC GATTTATGCTTCAAGAACTGAGGTTAATGTTTCTTCAATATTTGTGTTTTGGTAAGGAAAAGTGGGAAATTAGTTTGCCA CTACCATTATTACCAGTAAAAGAAGGATTATTACTGCCAAGAGTTTGCTCCTTCTTTGTGTGTTTTGTACTTTTTGTTCT AAGAAGCTGTAGATATCTGAGTGTCTAGGCCTAACTGTACAATTTACCAGCTGGTGTTCCTCTTGATGCTTAGCCGAGAG TTTGTCTAAGTTTTGCTGCTTTTGAATAATTTCTTTCCCATTTAATTTTTTTCAAAATTTTCTGTGTTGATTAATATCTA TCAGGATTTCGAGAAATGTAATGGTATTATGGAAGTAGCTGACCTTATAAGAGACAAGCAAGTTGATGAAAATCTCAGGT ACCGCTCTCGTTAGTTGTTAAAGCCAGTCTCACACATACTTTCCTGATACATACTTTTAGTCCAGTATTATGTTGAAACT TGTTCTATGATACTGGAAGAGAGCATTCGAATTTCTAATTTAGGCACCTTTGGTCATTGTGCAGTCATTTCCCCCCCTGA AATATTAAATAAATGTCATTTCTCAGGTTAAAATGTGGAGAGTTTTTATTGCTGCTCATTGGACATGTTAATGGAAGGGA TTCGCTTCCTTTGGCAACCATACACGAAGATACAAGGCGTCTTCTGGGGGAGAAATCAGCTTCATTGATATGGGCAGCCA GTCAGTTTGGCTCAACACTGGATCCCGAACAGAGACTAACAGCTCTCCAAATCCAGGCTCGGAGGGTCCTTGAATCATTG GACTTATACTGAGTGTTGAGGATAATGCCTGTGCCTGTGGTTTTAGGAAATTCTTAGTTGAAAATGTTGGCAGAGAATGT AGTTCTTTTTGTTTTGCACTTTTGTACTTGTGCTCTCATTTCTTACCTACAATTCTAGTTGTTTTTGCAATCTGGTTACT ATTTTTGTTTGTAAGTTGTATGATGTTCTTCTACAGCAAGTGTTGATGAAGGAAAAAAGTATCAGAATTCTCCTGTATTT ATGTATTATATACTTCCAAATCAGAATTCTACTGTGTTATTATCATCTGCCGATTTCACTTAATAGGAAAAATAAGTGAA AAGCTGTTGATGTTCTTGCTGGTTATTATCTACCTCACTTTGAGTGCAAGCTTTTAGACTATCGAGTCAAATGAGCATAC CCTTCAGTTCTCCAA
CDS sequence (LotjaGi3g1v0541200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACTTGAAGAAGCCACTATGGAGTGAAGGGATTGAATCGGATTCAGATGGTGCGGTGGTTGAGGTTGTGAAGTCGCT GCAGCAGCAGAGGGTGTACAGAGAAGTGACTCTCGCTCTCAGGACTGGCCTCAGAGACGCGCGTGCTGAATTCTCCTTCC TCCGTGTTCGCGCTCTCCGTTCCATTCTCAATTTCCTCCGTTCCGTTGCTGACTCTGACTCCACCATCGACCTCTTCAAC CAAACCCAATCAATTCCCGAACTGCAAGTGGTTCCGGTTCTCTTTCAGCACTCACTAAAAGAGACAGGGGAAGATTACAC TGAAAATAGGCTAGGAGATTTGACTCATATACTTGGTGTGGAAGTGGAACCCATCAAGTTAACAAGTCCATCTACAGATC ATGAAGTTGCACTCGCGCTTAGAGTCTTGGAGGGTTGTTGTTTGCTTCACCCGCAGAGTACTGCTCTTGCCCATCAACAC AACGCTATTCAGGTTTTAATGAATATATTATCTAATCGTGGAGTACTTGAGCAAGGTGCATGCTTAGATGCGCTAATCTC ATTGATGGTGGATTCCTCGCCCAATCAAATGGATTTCGAGAAATGTAATGGTATTATGGAAGTAGCTGACCTTATAAGAG ACAAGCAAGTTGATGAAAATCTCAGGTTAAAATGTGGAGAGTTTTTATTGCTGCTCATTGGACATGTTAATGGAAGGGAT TCGCTTCCTTTGGCAACCATACACGAAGATACAAGGCGTCTTCTGGGGGAGAAATCAGCTTCATTGATATGGGCAGCCAG TCAGTTTGGCTCAACACTGGATCCCGAACAGAGACTAACAGCTCTCCAAATCCAGGCTCGGAGGGTCCTTGAATCATTGG ACTTATACTGA
Protein sequence (LotjaGi3g1v0541200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYLKKPLWSEGIESDSDGAVVEVVKSLQQQRVYREVTLALRTGLRDARAEFSFLRVRALRSILNFLRSVADSDSTIDLFN QTQSIPELQVVPVLFQHSLKETGEDYTENRLGDLTHILGVEVEPIKLTSPSTDHEVALALRVLEGCCLLHPQSTALAHQH NAIQVLMNILSNRGVLEQGACLDALISLMVDSSPNQMDFEKCNGIMEVADLIRDKQVDENLRLKCGEFLLLLIGHVNGRD SLPLATIHEDTRRLLGEKSASLIWAASQFGSTLDPEQRLTALQIQARRVLESLDLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 20 | 294 | 275 | 9.8E-110 | ||
| SUPERFAMILY | 37 | 266 | 230 | 5.76E-10 | ||
| Gene3D | 123 | 260 | 138 | 7.8E-6 | ||
| Pfam | 132 | 230 | 99 | 2.3E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0541200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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