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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0545200 |
| Transcript ID | LotjaGi3g1v0545200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (NBS-LRR class) family; TAIR: AT3G14460.1 LRR and NB-ARC domains-containing disease resistance protein; Swiss-Prot: sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460; TrEMBL-Plants: tr|G7JBU2|G7JBU2_MEDTR NB-ARC domain disease resistance protein, putative; Found in the gene: LotjaGi3g1v0545200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:96119526..96125307) extracted from Lotus japonicus Gifu genome v1.2.
GTAATGGATCAAATGTGTGATGAACTATAGAAGCTTGAAGGACAATCTTCAAATTTGAGTGGGAGTAAATCGTCTCTAGT TTCTTTGGTGGAAGATTATAAATTTGAAGCAGTGGAGTCGAAGAATAAATCTACTCTAAACACGACTCAAAGTTTTGTTC CATCAGAATTAATTCGTATAACTTTTGAAGAAGTACATGAAATCACCACAAGATCCTACTCTAGCTTTCCAAGCACAATG CAGAGCATTGACTCTTGTTTAAGTGAGATTTAACAAATTGGTCATGCACCTAAGCCTGCACATGAAGATCCAAAACTACA GGAACTTTCCTCTAGCATGGTTAGTCATCAAGTTGAAGCTCGCATGAAACAGAAAATAGACTCACAAGCTGACATTCCTT TCATCACACAAGGTGTTGGCCATCCACCCAACACAACAACTCATGTCAAGGTAGAAACTTCGTCCTCAAAATTGTTTAAT GATAAAAAATCATCCTTAAAGATTTCAAGTCTATCAGAATTGATGTCACTACCTCCTATGGTAGACAACTTAACACTTGA AGGATGCCAATCATCAAAGGTCCTTCAAGGTGATTGATCGTTTCCCTACCCTGCCTCCGTAAAAAATCTCTACATACAAA AGTGCCAAAGATTGGAGCTTCTCCCATCTTTAGAATCAATACATAAGCTTGCCTTTCTCCACTTTTTGTGTATTGGAAAT AGTTGTGAATCTCTCTCGACATTAACCTTAGATATGTTCCCCCAACTAAAGGTTCTTTGTATATGGGATTGTCCCAATCT TCTGTCATTTAATTTTTCTGAGGGCTTTAGTGGTAACCTTGAGTCACTTGAGTCTTTAGAGATTAAAGACTGTCCAAGAT TGAAGTCCTTCCCAGATGAAGGACTTCCTACACCAAATCTAAGCACCATGTTGGTTTTCAATTGCAAGGACCTTAACAAA TTGCCCACTATGAACTCTCTCACATCCCTTGCAACATTTTTTTTACATGAATGTCCAAAGATTGAATGTCTACCCTATGG GGGTATGCCTTCAAGTTTAATTCAACTTTCCATCTCCGACTGTGACAAACTTACACCACAAAAGGATTGGGGATTGGTTC ATCTTGAGTATCTCTCTCATTTTCAGTTTATAGGTGAACGCATAGGCATGAAGTCATTTCCAGAGGAAAATTTGCTTCCT AGCTGTGTCATCTCTCTGCACATTGGCACAATGCAGAGTCTCAAGAAGCTAGATGATAAGGGTTTTCAACATCTGAATTC TCTTAAAACACTCGCAATTCATTGTTGTGACAAGCTAAAATCTTTTCCTGAACAAGGGCTTCCTGACTCGGTAAGATCTC TTTGTATCCAGAAATGCAGAAAGTTGGCTAAAAAGCTTAAATACACGAGAGGGGTAGAGTGGCATAAGGTGTCTCATATT AAACGTATAGAAATTGATGATAAAGTAATGTATCAAAGATTGCCATCACTAAATTAGGCTTTTGATTATGCATCATTATA TTCTATAATCTCTGTACTTACTTTTTTAATGATTTTCTTTTTTGTCTAAACAATTATGTATATGTGTGGACTAATATTTG CTTAACTTTGACGTACAACTCTAATATTGTTAAGCATTTATATAAGGAAACAGAAGTATGACTATATTGTTGTTTTTTTT TTTTGAAAGAAACATAATCTCATGTAAATCAAGCTTGCCAAAAAGCCAAAATGTCTTCAGCAGAGCAGTCTGATAACAAA AATTCAACAATTTTCTCCTTATCAGAATTCATCCCAAACATTGTTCCTTCATCAACTAATGAAGTTGTGGTTGAAGCTAA AGGCCATGATTTACCAACACCACCTTCCTTAAGAATAAGATCCGTATACCCTAATATAGATTCCAGCCTCTCAATTATCC CCTTAATTTCTTTTTAAACTTCTCCATCCGATTTGAAAACACCAGCAATTAATTTTACACCATCTTTTACGCGGTCCATA ATGTCGGGAGAATTTGTTGAGGCTTCCAAGCCAGCTTTGGTGAAAATATAATCCAATAAATCATCAGCTTCGTAGGCATC ATCTTTAAGCCCATCAACCCATCCTTTCACCAATGGATTAAGAAACTGTTTTTCCTCAACATCACTAAGCACAGTAGAGG CAAATAGAAAAAGCAACTTCAACTTCTGTAGAAGTTCCTCACCACGTTTGTCGCAGAGGAAGAAGCGCACGAGCTATGGA AGCAGTGTTATAATTGGTTGGGCTTCCAAACGGTCCTACTTGTTTCACTTCGAGCTCATTTTTTGCAGTCTAAATTTGGT TGGAATTCAACTCAGAATATGGGTTTTTTTTGTCTATTTGGCTAGCTACTGTTTGGACGATTTGGGGTATCAGAAATGGG ATGGTGTTTAGAGAAGAGACTGTTTGTTGGAATTCTGCGTTGGAATTGGTAAAATGGAGATCCTAGCAATGGAATAGAGT AAATATGAAAGGGTTTGGCTACTCTTTCTTTGAGGGGACAACAAATCCAGTGTTGTGCGTATGTTCTGCATGATTTGTGG GCTATGTTTCTTTTAGTGAGCTTGGTCATATTTAATGGGTGGTAATTGGTGTTGGGGTAGTTGGAAATTTTCTTTGTTGT GTTGGGTTGCAACTTTGTTTGCATGTTTAGCTTTTTAGTTTGTTTGACTTTTGGGTGTAGTTTCTTTTTGATTTCTTTCA ATTCTTTTTGTATTTGAGTTTAGCACCCCTTGTGCTATATTTGAATACAATATTTTGTCTTATCAAAAAAAAAACAAAGA AGAAAAAGAATATTGACCAAAAAAAAAGAAGAAAAAAAATTAAAAACCTCTACTTAGAGGAATGAAGATTGTAATAGCTA GTTTTATTGCTTTATGAGTAGGTTTTTAATTCTTAGGAAGAACGCTCAAGTTCCTTAGTTAATCGGCTCTATAAATCTCT AAAATGTGTTTACTATGAACTTAAATGATTTTCATAATTAAAAGCCTTGGAAATCCTAGCAAAAAGTGATTTTAAAAGTG CTTTAAGTGGTCTGAGATAGTTTTTGGAACCTAATTCACCCCTTCTTCGTTTGTAATCTTTTAGTTTTTAGAACATCAAC TTGAAGATCTTAGTATTCAAGTTCAAGAGCAAGTGCACTCCAATTTACCAAAGGAACGGAGAATCCATAGAAATCATCCC ATTGAAAACATTATTGGTGACATTAAAACGGGAGTTTATACTTAGACTTAATCTTTCTAATGCTACCTTGCATATGAACA GCTCCTTTTATTAATTTTACAATTTAATTTTAGATTAGTATGTCACAACATTTAAAGTATCTTTCACTTCTGTCTTATTA TTTGTTGCAGTCAGCTCTTAAGTCATACGATCTGACATCGTTGTGAACTTGTGATTGACCCACAAGGATTTGGTCTTAAG TAGACGTCATGAGGGTCGCTCGTGCAACCTGATTTAGGAACATCCCACCCCGGCCTGACTGACAAAGTATTCGAGCAGCT TTACAAAGACAGAGATATACTATTTAAGCACGACAGCTCCAAATCAACCGTGCATCAGTAAGCTCAACTTAAAGACTTTC TCACATTTAATAGACTCCGAACATGGATATCAAAACCTATAAATATAGGTTCATCCGTTCAATATTTATGTAACATGTGT ACTAACTCTTCGCTCGAGGACAACACCGCCGCGTACACAAGCCAACCACTTTTCACTGTTGAGCATTGCAAGAGAAGCAA TCCAGAACATGAGAAGAACATTTAACGCTATTTATGGGAAAGATTAGTTTTAAGTTCACTATTCCTCAACGTTCAATCAA ACTCTCTTTGAGCAATGTCATCAAAATACACTTCGAAGTAACAATGGTTCAAGAATACTGGAGTTCCCGTAAAAAAAAAA CGAATATTGGAGTTCAAGAAGCAATTTCTCATAGCATTGTCTTCGTGTGAGGCAATAATATGTTGTTCCTTCATATGAAA CTTGCCAAGCTAGCACGGTTCAAGAATTAAAGCTAAGATCATAGAAGCCAATGACTTTGAAGGTAGACAACCAGTCAAAA ATTGATCAAGCTAAACATTCCTCAGTTCGTGGGAAAAGCAAAAACACGCAGAGACCATGTTTCATTTCCTATGAAATCAA GTTGATAAAGGAAGTTTGACACTTAAAACAGAGGATCAAGTTGCTAACATACTAACAAATCCTATGAAGGCAATCAAATC CTATGCTAACTATTTATTTGTTGCTAAATAATGAATAAATTACCATTATTTTACACCTGTCTGGCAGGCAGTCACCATCC GTCGTCTTTTGACAAATCAACAGACTGACCTTATCTCACAACACTGAATATTTCCAATGTGTGTAAGTGCCAATCATTTA TGGACCATCAAAATAGTACTAACACAAATCATTTATTCCTTTTCAAATAGATAAATTACATTAACAAAAAAAAAAGATAG ATTATGCTAAGTTGCTAACCATATATTAATGCGAAGGACAGTGGGTGATTCTCACCCACAACCACAAATCCACAATAATA AAATTAAATATTGTTATCGTTGTTTGGAGATGGTCGAGGTCAGCATGAAGGAAAATAAAGACAGAGGTAGCAAGAAACAC AGTGATTGTAATTTGTAAATGTGTATTTTAAGAATTAAATTAAAGACAAATTGCACTTAAGTCCTGAAAGTGTACCATTT TTGCACTCACATCCCCCGAATTATTTAAAGGACATTGTTTTATAGAAAGCATTATGGTGAGATTATTATTATTGAGCCAC CCTTTCCCCTAAAATTGATAAATATGAATGATGAGAGAGGTCAATGCATTGGTGGTAGCCCAATTTTCCCTAAATTAATA TTCAACAGATTAATTAGACTAATATCGAGCATAATTAAGTAATTTGATAAATAATATATATTTATATATCACGAATTATT CACTTAGCTAATACTCCTATGAAAATTGTACAGTTTTAGAAATAATTAATTGAATATTCACTGAAGATGTCCTTTTTAAC TCCCTTGGTCTTTCTCCTCTCCTCCTCACCACTGTTTAAGACACAACAGACCCAACAAGAACATCACTATGATCATGAAA GTTGATTAATTGATCTAGGACCAGAAACACTATGTGCAATAAACGTGGAACAAATTAAACATAATTGTGATTGAAAAATA AAAAATCAATTTACAGTATTAATTTATTAATCTAGATTGCAAATCCCTTATGAAATTCACAAAAAACAAAGACACTAGAA TTAAGAAGATGAGTTACTTGGTACCGCAACCTAGAAGAAGCTTCAAAAACCGAAAGCATGGGAAGAAGCTCCAGCAGTAG TCGTTATTCCTCTGTTTCTTCTTCTTGTTAATTGCTTTGATTTGTGATGCCTTTCTCATGCTTTCCATCACATGATCCTC CTTATAATACATCTTCTCATGTTCATGAATCTCTTCATAGTCATCGTCCCCATAAAATACATCTCCAATTGCTTTCCGCT GAGACTCCTTTCTGTGAAAATAAGAAGGAGAAGGAGAAGAAGGAGGAAATTTGGATGTGCATATCTCTGAGTCTGTCATG CACCCACCACCACAGCCACTATGGTCCCTGTTGGCACTGTCAACGCCTTCACAATTTATTCCTTTAGCCATCCAAATATC CAATTAAGCCAAAGAAAAACAATATTAATATATGATTTTGGTGATGGAGGTTAGGTATCCGCCGCCAACAGTCGTGACTA ACCCTCTCGCCGCAGGTGCTCG
CDS sequence (LotjaGi3g1v0545200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCCCCCAACTAAAGGTTCTTTGTATATGGGATTGTCCCAATCTTCTGTCATTTAATTTTTCTGAGGGCTTTAGTGG TAACCTTGAGTCACTTGAGTCTTTAGAGATTAAAGACTGTCCAAGATTGAAGTCCTTCCCAGATGAAGGACTTCCTACAC CAAATCTAAGCACCATGTTGGTTTTCAATTGCAAGGACCTTAACAAATTGCCCACTATGAACTCTCTCACATCCCTTGCA ACATTTTTTTTACATGAATGTCCAAAGATTGAATGTCTACCCTATGGGGGTATGCCTTCAAGTTTAATTCAACTTTCCAT CTCCGACTGTGACAAACTTACACCACAAAAGGATTGGGGATTGGTTCATCTTGAGTATCTCTCTCATTTTCAGTTTATAG GTGAACGCATAGGCATGAAGTCATTTCCAGAGGAAAATTTGCTTCCTAGCTGTGTCATCTCTCTGCACATTGGCACAATG CAGAGTCTCAAGAAGCTAGATGATAAGGGTTTTCAACATCTGAATTCTCTTAAAACACTCGCAATTCATTGTTGTGACAA GCTAAAATCTTTTCCTGAACAAGGGCTTCCTGACTCGGTAAGATCTCTTTGTATCCAGAAATGCAGAAAGTTGGCTAAAA AGCTTAAATACACGAGAGGGGTAGAGTGGCATAAGGTGTCTCATATTAAACGTATAGAAATTGATGATAAAGTAATGTAT CAAAGATTGCCATCACTAAATTAG
Protein sequence (LotjaGi3g1v0545200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFPQLKVLCIWDCPNLLSFNFSEGFSGNLESLESLEIKDCPRLKSFPDEGLPTPNLSTMLVFNCKDLNKLPTMNSLTSLA TFFLHECPKIECLPYGGMPSSLIQLSISDCDKLTPQKDWGLVHLEYLSHFQFIGERIGMKSFPEENLLPSCVISLHIGTM QSLKKLDDKGFQHLNSLKTLAIHCCDKLKSFPEQGLPDSVRSLCIQKCRKLAKKLKYTRGVEWHKVSHIKRIEIDDKVMY QRLPSLN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 247 | 247 | 4.7E-17 | ||
| SUPERFAMILY | 3 | 217 | 215 | 4.19E-20 | – | |
| PANTHER | 12 | 159 | 148 | 9.5E-51 | – | |
| PANTHER | 12 | 159 | 148 | 9.5E-51 | – | |
| PANTHER | 139 | 215 | 77 | 9.5E-51 | – | |
| PANTHER | 139 | 215 | 77 | 9.5E-51 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0545200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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