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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0551300 |
Transcript ID | LotjaGi3g1v0551300.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Purple acid phosphatase; TAIR: AT2G16430.2 purple acid phosphatase 10; Swiss-Prot: sp|Q09131|PPAF_SOYBN Purple acid phosphatase; TrEMBL-Plants: tr|A0A151TLN0|A0A151TLN0_CAJCA Purple acid phosphatase; Found in the gene: LotjaGi3g1v0551300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:96814903..96817047) extracted from Lotus japonicus Gifu genome v1.2.
AATATGTACTTCTTTTTGGGCAGCATAACACCAAATATCACTATGAGATTGGAATCGGGAACACAACGCGGCAGTTTTGG TTTATAACTCCTCCTGAAGTTGGTCCTGATGTGCCATACACATTTGGTCTTATAGGTATGTTTACTCCTTTAACTCAGTA TAGTCTTCCAAGCTGGTTGTTTAGTACAAGGATGTATACATTTATCAGCTGCCTTAAAAGTTGGTAGTTTCTTTGTGTCT GTTTGGATACCAATGGATTGAGATGCTCTCATGTCACAAGACAATGTCAAGTGAAACATTGTGTCCATCTCTCCCTTCAT AAACATTGTGTCCCCATAAGCCAGTATGTTTGTCATTAACTGTTTTTACATTGTTTGCAGGGGATCTTGGTCAGAGTTAT GATTCAAATAAGACCCTTACTCACTATGAAACGAACCCAAAAAACGGACAAACTGTGCTGTTTGTAGGAGACCTCTCTTA CGCGGATAACTACCCAAATCATGATAATAATAGGTGGGATTCTTGGGGAAGGTTTGTAGAAAGGAGCGTTGCTTATCAAC CATGGATATGGACTGCAGGGAACCATGAACTTGATTTTGCTCCAGAAATTGTAAGTTTCTCATAAGAATTGATTAAATCT GGTTTTTAACTACTTGATGAACTTATCATGCTTTTGTTTTTCAACAACAATTTTCAACATTGCATGTAATGCATTTTCCA GGCCCAAATTTTAGTAAGTTTTTAACATAGATTGGTGATTTCCCACAGGGTGAAACCAAACCTTTCAAGCCTTATACCCG CCGTTACCCTGTTCCTTATAAAGCATCAGGGAGTACTCAACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCATACATCA TTGTCTTGTCTTCATATTCAGCATATGGTAATATGATAGATACAAAGTGTTAATAACATGTTTGGTTCTGCGCCGGTTGG TTTTATAATCACTTATGGGGAGAAGCTACAAAGCGTTAGCTTCTCGGGTTACCGTAGTTTGGATTGTGTGTCACCACCAC TAATCCAAACACCCTAAATTGCTTTCTTCTGCCAGATTATTACTATTAAGATTTAACTGGCGCTTGTAAACTGTGATTTC ACTGCTTTACATTGGTATGTCTGTTGGTATAATATAGTCTTCATTTGTTCTCAGGAAAATACACACCCCAATACAAATGG CTTGAACAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCGTGCATTCACCTTGGTATAACAG CTACAATTATCATTTTCTGGAAGGGGAAACAATGAGGGTAATGTTTGAGCCCTGGTTTGTGAAGTACAAGGTTGATGTTG TGTTTGCTGGTCATGTTCATGCCTATGAACGTTCTGTAAGTGCTAACACTTGGCTTGTTAAGTTACTTGACACTTCAATT CCTCATTTGAAATTTCTACATCATATGAAAACCACCATTCCGAATCATGTATCATTAGGCTTGTATTCAAACTTTGAAAG ATAACCATGCAAGCAAATTTCTATTGCTATCCACTGCTAGAAGTATAATATAAGACTATTCATATTTATTGGAGATTATT TAGTGCATTTTCTAGTAGATGAGCTCCTAAAAGCTTGTACCCAAATGGACTCTTGGTTCATGACATCCATAAACATCATT ATTTTTGTGTTTGCTTCCAATGACAATTGATTTGTTCGTGTCTCAGGAGCGTGTCTCGAATATTGCATATAATGTTGTAA ATGGTATTTGCACTCCTGTGAAAGATCAATCGGCTCCTGTATATATAACCATTGGGGATGGAGGAAACCTTGAAGGCTTA GCAACCAAGTAAGCTTTATACATGAAATGTGTCAAGTCTTATTGCTTTTCTACCTTTTCTTTTTATGCAACTAAGTCTGA TAAAAACTTCATCTGAGATACAGCATGACATATCCCCAGCCAGAGTACTCTGCATTCCGAGAAGCCAGCTTTGGACATGC CACTTTCGACATAAAGAACCGAACTCATGCTCACTATGGCTGGCATAGGAATCAAGATGGAGATGCTGTACAGGCTGATT CCCTTTGGTTTTTCAACAGATTCTGGCACCCAGTTGATGATTCCACAACTCCCGTTTCCCATTAA
CDS sequence (LotjaGi3g1v0551300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGGTAATGTTTGAGCCCTGGTTTGTGAAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTATGAACG TTCTGAGCGTGTCTCGAATATTGCATATAATGTTGTAAATGGTATTTGCACTCCTGTGAAAGATCAATCGGCTCCTGTAT ATATAACCATTGGGGATGGAGGAAACCTTGAAGGCTTAGCAACCAACATGACATATCCCCAGCCAGAGTACTCTGCATTC CGAGAAGCCAGCTTTGGACATGCCACTTTCGACATAAAGAACCGAACTCATGCTCACTATGGCTGGCATAGGAATCAAGA TGGAGATGCTGTACAGGCTGATTCCCTTTGGTTTTTCAACAGATTCTGGCACCCAGTTGATGATTCCACAACTCCCGTTT CCCATTAA
Protein sequence (LotjaGi3g1v0551300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRVMFEPWFVKYKVDVVFAGHVHAYERSERVSNIAYNVVNGICTPVKDQSAPVYITIGDGGNLEGLATNMTYPQPEYSAF REASFGHATFDIKNRTHAHYGWHRNQDGDAVQADSLWFFNRFWHPVDDSTTPVSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 130 | 130 | 1.7E-81 | – | |
Gene3D | 1 | 130 | 130 | 6.7E-50 | ||
PANTHER | 1 | 130 | 130 | 1.7E-81 | ||
SUPERFAMILY | 3 | 129 | 127 | 7.6E-28 | – | |
Pfam | 51 | 110 | 60 | 4.3E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Acid phosphatase activity | Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum. |
Expression pattern of LotjaGi3g1v0551300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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