Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0551800 |
| Transcript ID | LotjaGi3g1v0551800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2-phosphoglycerate kinase; TAIR: AT5G61450.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q8TGY9|PGK2_METKA 2-phosphoglycerate kinase; TrEMBL-Plants: tr|I1LNU8|I1LNU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0551800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:96884424..96890781) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTATGCACCGACGGTGTAAATAAGTTTTACACCATCATTCAATCATATCCCTCCTTTACCTAAAAAAAATATATGAG TATCTACTATCTAGTGAGTGTTAAAACACTTCCCATTCTCAATATGAGTTGATGGTACAGAGAAAAACCTCTTATGCACA CGTGGTTTTACTTACAAAAACATCTTAAGTGATTTGTGAAGCAGGATTTGAAACACAAACATGAACATGAGATCGATGAA GAAGGGGAAGGGGAAGGAGAAGGAGAAGGAGAATGTAATCTTTGCGACAAGCCCTGTCAGTGGCGAAGACAGCGACGAGA AGCAGCAGCAACACGCTTCCTTTCCCTCTGTCAATACTCGCAACGCTTCCTCCAAATATGATTTCGTCAAGGTAGTTATT TCATACCTAGTTTTTATTTATTTACACAAAAATTGAAACTTTTCTTCATTCCAAATCTGGGTTTGCTTCCTTTTATCTCT TCTTCATCACCCAATTAACTATTTGCCATTTCAAAATGCCTTCTGGGTTTTGTGCTTGTAGGTAAAGGTGTGGTTGGGTG ATAATGCTGATCACTACTATGTTCTGTCCAGATTTTTGCTCAGTAGAATGCTAACAGTAACCAAGGTATACTACTCTTCA TTTTAATAATTTGATTGAAGTTATTTTAATCATTTCATTTAGATTATACTTTGATTTTTCATGCAACCTTGAATTGAATT GGTGAAAGCTAGTAAGGATGTTTGTATCATTTATCATTAGCTTGTTGATTTCAGATTCCAAACCATGAAGCTATTAAAAT TGCTCTTGAACTCAAGAAGCTGCTCGTAGACAACAGCCTTCTAGATGTGTATGCTATTTCTCATCTATTCATTTTATATT CTTTTGTTCATGTTTTCCCCACTTTTTCTTTCTCCATCTGGGTTATGGTAGAATTTTATAATAAGGTTCTTTCATCTGAT CCTATTCTGCAGCTCTCAGTCCGATTTGGAAGTCAACCTATTTAAGGTATGCCGAGTTTTTGGTTTGATATGTCCAACAC TCAAACCCTCCCATATTTCTTGGCTTTTGGTGCTGCTCTTTTTCTATCTATCTATCCTGTTTCTGTTTGACAACTTGAAG ATCTTTTAAACGAACTTTCATCATTGGCTTTTTGTTAATTGATTTGTTCGACAGGTCTTTCTAGATAAAGATATATCATT GAAATGTCAATATAATTATTATAGATGGTTTTAAAATCTGTAACCAATTAGGGCTTAAACTTTCTGTACCTCTCTTAAGA GTGGGAAATTGGATTCCATTAATTTGTCAGGATGAAATAACCATGGCTGGAATTCCTCACTTTTCAAAATGCTTATAGTT ATAGTCACTTAATCTATGAAACATCCTAATAGGGCACTATGTGTGCAGCTTATGGAGCGGAGGGGATATGGAGAAGAGTA CATAAATCGTTATAAGATGATGACAAGGTTAGTATCTGTTTATGTTAATTCCATGTATATGTTGTATATATGTATGCAAA CACATTTTATCTTTATATATGTAGTGGGTTAAATTTTTGTCTATTTTTACTTAAATATATGTATTTAACTTTTAAGCGAT ATGTAAACTTTTCCTTTATGTGTATACTTATTTTTCCTGTCTTTCTAACAGTTCTAATATGATGTTCAAAATTATTTCAT ATTGATGTGGGAAAAGTAAAAACAGAAAAGAAAAATAAATTACTCTAGGGTGATACATTTTATGGTAGTAATGAGGCTTC TTTTCCATTTTCTTGCTTTCACCTTTTGTCCAGCTTTCACCATCAAAGAGTTCCATTGGTAATCCTTGTCTGTGGAACTG CTTGTGTTGGGAAGTCTACTATTGCCACCCAGCTTGCTCAGAGGCTAAATTTGCCAAATGTATTACAGGTGCGATTTGTG TATCCTTAGTATAACCACATTTTCTATAATATAATTTAAAATAAGGGCTTTTTCTATTAGGTGCAAGTTAGGCAAAGTAT TTCCAATTTGGTGCAACCAAACTGGAATCATATATTCTTGTTTCACTCTGGCATCTAATAGGAATTGTCCCTATATTTTA TTTTGATTGTTTGAAATTATATTCAAATGACCTTGACATTTTTCTGTTGTTGATTATGATAGACAGATATGGTTTATGAA TTGTTGCGCACATCAACAGAGTACGTTCTGAACTTCATTATTTTTGCTTTGATTGAAAGTTCTGGTATTCAAGACAAGTA TTTATTCAAAAAGTGTTATCATTAGCAACCATACCAAGGCTACTTTTTACCTAAACTTAAGTTCTTGTGAAATCATGTTT TCACCAAAAAACCCAAAAACATTAAGTTTACACATATGTGTGCATTGTTACTATTTCATAGAAAAAGGCCATGTCGCTGA TGCAATATTATGCTTGAATTTATACAGTATAGCTGAGTTTGGTTAAGTTCTAACGTTGCTGTATAGCTAGCTCGTTGTAT GTTTTGTACTTGTGTAGTTCTCTTTATATATATTGTTGTTTATGAGTTGATTTTATAAATATAATTGTTCAACACAGTTT ACTTTTCACAAATTTTAGTTTCAATTTATAAATCACAGATGTTAAAAAGTTCCAGTGGAACATACATGAAAGATCTTTGA CAAATCTGAACTTTCTGTTGGCACTTTCATTTTCTTCCCTGACGAATTTCAACTTTTTTATTACAGCAGTGGTTAGTACT TTTATCTTTGTAATAAAATCTGAATGATTATTTTCTTGTATCTTATGTAGTGCACCATTAGCATCGACTCCTGTATGGGC CCGAGATTTCAGTTCGTCAGAGGAGTTAATAACTGAATTTTGCAGAGAATGCAGGGTTGTTCGTAAAGGTTTCTCAGTTA TTTCTATCTTGAGATCTCTATCATTTCATAAGTTTAATTTGGTTATCATCATTCATCACTATAAAATAATTAATTTTCTG ACAATCTGACATAATGCTATGGATATTTTGTTTCCTTTATAATTGATTGTCTTCATCTATTAAATTGGAATTTCGTGTCT AGGTTTGGCTGGTGATTTGAAAAAAGCAATGAAAGATGGAAAGCCAATTATAATTGAGGTATTCATGAACATGTGTTAAG TAGCAGGTTCCCTGTATATCCTGTATAGTATCCCTGCAGTTTTAGCTTGGTCAATCTATATTTGATTAGTTTATTTCTTA AAATTCCAATCATGAGTAGATTAATTTTTCTCTGCTGATGATCCCATCCAGAAAATCTCAGATATAAATATAGATAGAAA TTGGAATATAACTTTCTTGCAAGTTTATAGTGGTCAGTGTTATTTTTGTTTCCTCTTTTCTTCCTATATTTTTTAACCCC ATCCACCATTGTTTTTCATACTGACAGGGAATACATTTGGATCCTAGCATTTATTTAGTGGATGATGAGCAAAAATCACC GGAGGTAGATGCAGAAAATAAAGCGGTAAATCCAACATCAGTGACATCAGATGATAACGCTACTGTACAAATTAATAATA TTCACGTCGGTGGTGGTGATGAGAGGATTTCTAGCTCCAATGAGGGAGTATCTGTTGCCCAGGTGGATGCAGTATCAAAT TCTATGGCATCAATTGGCCTAATTGGAAACATCTCTGGACGCAAAGGTTGGTTCTTTTATTTGTCATATTTGAATGCTGT TTAGTGTTTTTTTTTCTCCCGGTGAATACATGTTGGGGTGGATTCGGTTCCGTTTACCTTCAGGGCCATAGGCTGCTTAC AAAGGTACTTACCGATTGTCCACCATCACAACCCTAACATCGGCTAAGGAATCAAACTCTTTCTGAGGGGAAGTGGTCTG TCCTTACCAACTGAGCCAAATAAGCCATAATGTGCATGGCATAGTTATTATTTCAATTTAAAGTTTTAATGCAAATTAAT TTGTCATGCAGGTGCTTCTCTTAAAGAACTGGAGACAGACAAAACTGCAGTTAATAAGGATAAATCAGGTCCCAAACCAA TAGTTGTGCCTATTGTTTTGAAGATGGCTGAATTTGATCATAAGGTTTTGTCTCACTGTCCATTGATTTTTGGAAGGAAC AATAGTATGCATAAATGGTTCTTGTTTACATTTGTAGCATACTTAAGAAAATTATTTGATTGTCCAAGGGTATAGCCAGG TCATGTGTCTCTGTATATCACTGATGTGTTCCAATAGTGCATGGGGGACTAATGATGGTCAATTAAAATGATAATGATGT TTAATGGTTGATGCATAGATTAACTGCAACCGTAATATGATATGTAAAAGACAACAATATCTAGTCCCCAGTGTTGTCCT GATTGCAGCCTTCTGTTGTCTTAAGTTAGTAGGAGTAGGATACATTGAACTCTTGAAGACCTAAGTGTCTGATTGGTTTA GCGTTGAACTCAACACCGATCCATGCTTGATTTAACGTGACAAAATCTTGTTTCTCCTTTGATGCGTTGGGTTTTGTGTT TTTCCATTTGCGTTGATGCAAACGCCAAACCAAACGGGCACTTAGGTCAAGTGTGCAGATGTAGTTATCAGATTCGATCA TTTACTCGTAATCATTTACTTGTAACCTATACAAATCAAATAACCTAGTGAGACATCTCGTATCTTATTTGCAGGCATTA CTTGAGGAGTGGATCTACACTTGGACAGTCAATGATAAATGCCCGGACCTGGTACGAACTCTAAAATTAAAGATCCTACC TGAAGGCCTTGGCTTTTTGCTACTTTGTGGTTACTTCATTTTAGTTTCCTTGGTAATATCATTTTATTATAGTGAGAGGC ATGGAAGGGAACTCATTTAGTGAGTTATACTTACAAAATACTCCAAAAGGACCAAAACTCTAGAAAGCATAATGAAGCCC AAGAAATTATCTTGTAGAGCAAGTCAATAAGGACTTCATAGTGATAGTGGACAAACCATTTTTAATAACAATATAAAAGT ATTTACTATTTAATGACCTGCTTCGATTTCCTACACAACTATGAAATGCAAAAGCAAACAGGCCAAGGCTTCATATTTAG TCAAGAATTTTTTTAAGTAAATCTGAATAAGGTATCCTCTATAAGAAGGCTTCGTGAACTAGTATAAAATTGGGATTTAA TCTCTCTCAGCTGTTTTCTGATATTTTTCTGTTCTATTTACAGGATGATGATAAGCTTATAGCTAACTTAAAAACCATAC AGGATTATCTGTGCTCGTTCACATCACAGGTATGTCAGTAAAAATATACTTTACACTGATTAGTTTTTATGATAACCAAC ACAAATGCTGAATAATTACAATGTTTCCACAATGAATTGCTTCCATGTATTAATTAATGAATGTGAAGCAGATAATTACA ATGTGACTTATACCTAAACATTTAAAATTTTGATAGTATCTTTTATCATCTGCACTTGTTGATCATAAATTTTCATCACT TGATGTTACAGGGGTTAACTGTGGTCAATGTATCAGCGACAACATTTCCTCAAGCACTGGATTGGCTCCATGGTTACCTT CTTCAGGTAATTATTTTTAAGTTTTCTCATATTTGACATTTTTGGATTTTAGTCCACTATTTTTACTCAGAACTGACTTT AATTTAATTATTTTTTCAGTGCATCGAGCAAGGTACTTCATTAGGGTCACATGAAAATGTTACACCAACACAAGTAGCTG GAGCATAGGCAATGTAATGAATGATTCCAAATTTGACAGGTATGAAATTCTAGTTCCATCCTAGAATGCTATGCTACATA CACCGAATTGGAGAGTTATTTTCCATTTATTATTATTATTATCCTTGCCAATAATGTAGACATGTTTTTCTAGATTGAAC TTCACATTGTAAGTGGATGATGGTGGAGAATAAATTATCAAGTCAAAAGGGAAATTAGTCTGTTCAAGTATGATGCTCAC TCTGCCAGCCCACTGTTAAAAGCTACCCTAATCTTGTGAGGAGATCATGGCTTGGGAAAAGAAAGCCCCGTGAAAGTTGT AATTATTGCATTATCAACATTTGCTATTCAATTAATTGTATGATTATGTTCTTTGACATTGAATCCCATGCTTCCATATC CATTGCATTATGAGTACCCTGAAACAGGGAAATTTCTAGGATTCTCAGGAGTATATATTCATTCTGTTAAATAATGACAT CCATACCAGTACGATTAGTTATCATCCTTTTTTTTTTAAAGTTAAAAAACTGTCACTTAAAAAGTGCTTTTATTAATGAC TTAATGTATTGAATATTCAGTTCTCATTATATCCAGTACTCTTGCGGGATTGAAAAATTGTTCTGGAAACATAATAGCAT AACAAGTTTACCATCAAGCGTGTAAATCAACTCTGATG
CDS sequence (LotjaGi3g1v0551800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACATGAGATCGATGAAGAAGGGGAAGGGGAAGGAGAAGGAGAAGGAGAATGTAATCTTTGCGACAAGCCCTGTCAG TGGCGAAGACAGCGACGAGAAGCAGCAGCAACACGCTTCCTTTCCCTCTGTCAATACTCGCAACGCTTCCTCCAAATATG ATTTCGTCAAGGTAAAGGTGTGGTTGGGTGATAATGCTGATCACTACTATGTTCTGTCCAGATTTTTGCTCAGTAGAATG CTAACAGTAACCAAGATTCCAAACCATGAAGCTATTAAAATTGCTCTTGAACTCAAGAAGCTGCTCGTAGACAACAGCCT TCTAGATGTCTCTCAGTCCGATTTGGAAGTCAACCTATTTAAGCTTATGGAGCGGAGGGGATATGGAGAAGAGTACATAA ATCGTTATAAGATGATGACAAGCTTTCACCATCAAAGAGTTCCATTGGTAATCCTTGTCTGTGGAACTGCTTGTGTTGGG AAGTCTACTATTGCCACCCAGCTTGCTCAGAGGCTAAATTTGCCAAATGTATTACAGACAGATATGGTTTATGAATTGTT GCGCACATCAACAGATGCACCATTAGCATCGACTCCTGTATGGGCCCGAGATTTCAGTTCGTCAGAGGAGTTAATAACTG AATTTTGCAGAGAATGCAGGGTTGTTCGTAAAGGTTTGGCTGGTGATTTGAAAAAAGCAATGAAAGATGGAAAGCCAATT ATAATTGAGGGAATACATTTGGATCCTAGCATTTATTTAGTGGATGATGAGCAAAAATCACCGGAGGTAGATGCAGAAAA TAAAGCGGTAAATCCAACATCAGTGACATCAGATGATAACGCTACTGTACAAATTAATAATATTCACGTCGGTGGTGGTG ATGAGAGGATTTCTAGCTCCAATGAGGGAGTATCTGTTGCCCAGGTGGATGCAGTATCAAATTCTATGGCATCAATTGGC CTAATTGGAAACATCTCTGGACGCAAAGGTGCTTCTCTTAAAGAACTGGAGACAGACAAAACTGCAGTTAATAAGGATAA ATCAGGTCCCAAACCAATAGTTGTGCCTATTGTTTTGAAGATGGCTGAATTTGATCATAAGGCATTACTTGAGGAGTGGA TCTACACTTGGACAGTCAATGATAAATGCCCGGACCTGGATGATGATAAGCTTATAGCTAACTTAAAAACCATACAGGAT TATCTGTGCTCGTTCACATCACAGGGGTTAACTGTGGTCAATGTATCAGCGACAACATTTCCTCAAGCACTGGATTGGCT CCATGGTTACCTTCTTCAGTGCATCGAGCAAGGTACTTCATTAGGGTCACATGAAAATGTTACACCAACACAAGTAGCTG GAGCATAG
Protein sequence (LotjaGi3g1v0551800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNMRSMKKGKGKEKEKENVIFATSPVSGEDSDEKQQQHASFPSVNTRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRM LTVTKIPNHEAIKIALELKKLLVDNSLLDVSQSDLEVNLFKLMERRGYGEEYINRYKMMTSFHHQRVPLVILVCGTACVG KSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLASTPVWARDFSSSEELITEFCRECRVVRKGLAGDLKKAMKDGKPI IIEGIHLDPSIYLVDDEQKSPEVDAENKAVNPTSVTSDDNATVQINNIHVGGGDERISSSNEGVSVAQVDAVSNSMASIG LIGNISGRKGASLKELETDKTAVNKDKSGPKPIVVPIVLKMAEFDHKALLEEWIYTWTVNDKCPDLDDDKLIANLKTIQD YLCSFTSQGLTVVNVSATTFPQALDWLHGYLLQCIEQGTSLGSHENVTPTQVAGA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 19 | 19 | - | – | |
| MobiDBLite | 1 | 46 | 46 | - | – | |
| PANTHER | 29 | 446 | 418 | 1.9E-198 | – | |
| PANTHER | 29 | 446 | 418 | 1.9E-198 | – | |
| Gene3D | 138 | 274 | 137 | 5.0E-14 | – | |
| SUPERFAMILY | 148 | 253 | 106 | 3.88E-9 | ||
| Pfam | 151 | 256 | 106 | 3.6E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0551800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…