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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0554100 |
| Transcript ID | LotjaGi3g1v0554100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily protein, putative; TAIR: AT4G25260.1 Plant invertase/pectin methylesterase inhibitor superfamily protein; Swiss-Prot: sp|P17407|21KD_DAUCA 21 kDa protein; TrEMBL-Plants: tr|A0A072UU39|A0A072UU39_MEDTR Plant invertase/pectin methylesterase inhibitor; Found in the gene: LotjaGi3g1v0554100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:97173022..97176871) extracted from Lotus japonicus Gifu genome v1.2.
AATAAAATAAAAGCAAATCATATAATAGTTAAATATAAGAGTCGCTCTTTATAATATTGTAATTGTTTTTTGTATTAATT TATTTCAAACTTAATTAAATAAAACTTAATTAAATATAAATACTAACAATTAATTTTCGTAACAATCATGAAATATGTTC ACACATGACTTTAAGAGTGCATAGAGAAAGTCTATTTTTGAGATGATGCATGTGCAAGCCCGTTGATGTTACAGCAGATT CAACGCGATCTTAATTTAATTTATGACCTGTATTAAGAGAGTACCACGGAATCAGAACGTGGCACGACGTGCATTCCCAT CTTGCACGGTTCTTATGCAGACAGTTGCTGATGGACATAATGAATTTGATAGCGTATCAACAAAGTGAGAGCCATTTGAC ACAGATTCTTCTAGAGTTATAAAAGCCCCGTTATGCATGCATTTTTCTACGGAAGCAATAAACCAATGGCTTTGCACTTG CACATTAGTGATCTTGTTTCAATGCCCCGTTGCTTCAGATTACTTGTGTGTGCATTCCTTCTATTCATCTCAACCACCCT TGTTGTTCAAGCAGCATCTGATTCTGTAGCAAGAAACTCCACCACCAATACTACCCTGCTCAATGCCTCCAAAAAGTTCA TACGAAACCAGTGCAATTCAACTGCCACTTACCCAAATGTTTGTTACAACTCTCTCTCCCCGTACGCATCAAAAATCAAA TCCAACCGTTTGATACTCACCAGAGTCTCTGTTCTTCTGGCTCTGAAAGCAGCAAGAGCTTCATCTAGGGTAATGACAAG GCTATCCAAGTTGAACACCCTGACACATGATGAGACCTTGGTCGTTGCTGATTGCGGAGAGAACATTGATGACACAGTGG ATCTGCTTGAGCAATCTGCTGATGGCATTTTGCATTTGAATGGCACGAGAACTAATGAGGATAGATTTCAATGGGATGAC ATAAAGACATGGATGAGTGCGGCCATAACTGATGACTATACATGCACGGATGAGTTTCATGAAATGGAAGTGCGGCCTTC AGTGCAGAAGATGATCAAAACCAGTGTTGATTATGCGGAATGGATGACTAGCAATGCCTTGGCTTTCGTAAACAGGCTTG CCTACTAAACATGTTTGGTTCTGTGGTGGAATGTCCTATAACCACTAGGAAGAAGCTACTAAGTGTAACTTCTGGAGTTA CCGTGGTTTGAATTGCGTGTTGCCACCATTCCAAACATACTGAGAAACAAACACTACTGTTTCTAGCTATATGTCAACTG TATACATATATAGGCCCTTGCTATCTAGGGATCATTAGTTGTGTTGTGCTGGTTAGCTTTTCCATAGGCTACCAAGGTTA AGGTAAATTTCTTGCTGTTAGCCTGTTTGTTACTGCATGATTCATAAGTTAATCGAATACCGAATATTTCAATTTTGTGC AAGAAAAAAGAAGAGTAACTAACATGCTGTTTTCCAGGGACTTTTTGGGTACAGGAATACTAGATGAGTCTGAGGTTTAA TTCCAACATCTTATGTAAATTAACTAAGTCTCTAATCACTATAGTAATTCCTTCAACGGATAATTCCTCTGTTCAAGAGT AAGAGAACATGTCAAAAAGAATTATCTATTTCTGAGGGGTAAGAAATCATTTATTCCACACCATACAATTCAGAAAGGGG TATAAAACTCAACAGCTACGAATGGACAGACTTAAAAATAATCTTTTGGTGTAGCTGGCAAAGCACTCAACCTAGTAATT ACATGTGATGTGAAGATAGTATGTGAAAAAATAATATATTTTCCTGTATTTGATGCTAAAGAACGGAGATGAAGGAAGAC AATACTAACTTGGAATTGAATCCAGCAAGTTACGTGTCACTGCTGTACATCAGTATACCCTTAATGTAATCAGATTTTGT GGGAGAAAGAAGAAGCAGAATGGACCTTGCATCATCAAGCATATGTAGAGACACAAGAAACATACACATGGGCTGTCTTG TGGTGTTAATTAAGTCTTTGGACGCATAGCTGTCTAATAATCCAATCCTCTGTCAACCAGCATCATTCTAACTCTCTCCA TGTCTTCTAATCTGCCTGCATTTTCATAGATCTTCATAAGAAGTGCAAAATTATGTTCATTGTCTGGCTCTAAATCAAAA AGCTTGTTTGCAGCAATCTCCCCTATAGCTACACTTCCATGCAAATAGCAGGAATACAATAAAGCTCCCCACTGGGTTGG ACCTGCAGCCTCAGAGCCGATTCCATCGGTTATGATGCTATAAGCCTTTTCAACCATTCCTGCTCTTCCATAAAGGTTAA CCATGCAACCATGATGTTCCATAATGGGTTTTATTTTATACTTTTCAGTCATTAAAGCATACAACCTCACTCCATCATTC ACCAAACCCAAATAGGCACAAGCTGATAGTAGTGAAACAAATGTTATTTTATCAGGCTTTACACCAGCTTCCTCCATTTG CTCAAAAAGAGCAAGGGCTTCTCGGTGTTTGCAATGAGCAGATATTATAGAATTCCAGGAAACAACATCCCTTTCTGGCA TTAAATTGAATAACCAACGCGCTGTATCCAACCTTCCATGTTTGGAGTAAGCTATGATCAAGGAATTAGCAATGGACAAG TTCCATTCAACTCCTCGCCTGATCACCCACCCATGAATTTGGACCCCGAGATCCATTGATGAGACACCTGTGAGAATCGT GGATATGGAAACAAAATCAGGTTTACACCCTTCCAAAACCATTTGGCAGAAAGTGTCCATTGCCTCAACCTCAAGGCCAT GATGAACATAAGCTGTGAGCATTGAATTCCATGAAACGGAGTCTCTACGATGCATCCTGTTAAAGATCTTTCGAGCCTTT ACAATGTGACCGCACTTAGCATACATGTCAACCAGTGCATTGAGGACAAACCCATCATTGCCAAAACCAGAACGAACCGC ATGGCGATGCACCTCCTCCCCAACTTCAAGTAACCCTAGTCCTGCACAAACTTTCAGAACTCGAGGAAACGTGAACAAGT CAGGCTCCACACCCTCTTCCACCATTTGGAAGTAGAGCGCAATGGCATCATCATAGAGACCCAGTTGAGCATACCCTGAG ATAAGAGAATTCCAGGGAAATGCAGATGCATCCCTCTGAGACATTTGATCAAACAGGTCGTGGGCATCTTCCATGTACCC AAAAGAAGCGTACAACCTCACAAGCTTGGAGGTGACGCCAACATTCTTACGCAAAAGGACTGTAGGTATGAGGCGGTGAA CTTGGATACCATGACGAATGGCTTGGGAACGGTAGCAGGTTTCTAGCAAAGAAGCATAGATTTCTGGGTCAATTCTGATG CCTTTCTCTATAGAAGCTTCAATGTCTTTGAGTACTTGTTCAATTGCTTGGTGTTTAGTTTGGGGATAAGGTTGTTGATG GATGAGGAGTGGGGTTGATTTTGGTTTTGGGAAAGAAAGAGTGTTGCTTCTATCTTCACTTTGCCACTTTCTGTATTTCT TGCTTTTATCTTTGTTGGTGTTCTTCTTAGCAGAGCACAAGGTAGTGGGATTTGGAGGGAAGCTTAGAGTGCCTATCATT CTAAAGTTCTAACTTCTTTGACACTAATTGATGCCTTTGTCTAGTATGATACTATATCTCATCAACACTCTCCTTTCTTT CACAGTTCTAAGAGGATTACAGGATGGATGGATGGATGGCAACACATCTCACCACACTTTCTATAGCTAAAATTTATGCA AGGCTTTACTGAAGAGGGAATGGAATTCAATAAATTAGGTGCGAGGCTTGTATGATTTAAAGATCTTACATAAATCTTAT CTAATAAACA
CDS sequence (LotjaGi3g1v0554100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATGCATTTTTCTACGGAAGCAATAAACCAATGGCTTTGCACTTGCACATTAGTGATCTTGTTTCAATGCCCCGTTG CTTCAGATTACTTGTGTGTGCATTCCTTCTATTCATCTCAACCACCCTTGTTGTTCAAGCAGCATCTGATTCTGTAGCAA GAAACTCCACCACCAATACTACCCTGCTCAATGCCTCCAAAAAGTTCATACGAAACCAGTGCAATTCAACTGCCACTTAC CCAAATGTTTGTTACAACTCTCTCTCCCCGTACGCATCAAAAATCAAATCCAACCGTTTGATACTCACCAGAGTCTCTGT TCTTCTGGCTCTGAAAGCAGCAAGAGCTTCATCTAGGGTAATGACAAGGCTATCCAAGTTGAACACCCTGACACATGATG AGACCTTGGTCGTTGCTGATTGCGGAGAGAACATTGATGACACAGTGGATCTGCTTGAGCAATCTGCTGATGGCATTTTG CATTTGAATGGCACGAGAACTAATGAGGATAGATTTCAATGGGATGACATAAAGACATGGATGAGTGCGGCCATAACTGA TGACTATACATGCACGGATGAGTTTCATGAAATGGAAGTGCGGCCTTCAGTGCAGAAGATGATCAAAACCAGTGTTGATT ATGCGGAATGGATGACTAGCAATGCCTTGGCTTTCGTAAACAGGCTTGCCTACTAA
Protein sequence (LotjaGi3g1v0554100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHAFFYGSNKPMALHLHISDLVSMPRCFRLLVCAFLLFISTTLVVQAASDSVARNSTTNTTLLNASKKFIRNQCNSTATY PNVCYNSLSPYASKIKSNRLILTRVSVLLALKAARASSRVMTRLSKLNTLTHDETLVVADCGENIDDTVDLLEQSADGIL HLNGTRTNEDRFQWDDIKTWMSAAITDDYTCTDEFHEMEVRPSVQKMIKTSVDYAEWMTSNALAFVNRLAY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 47 | 47 | - | – | |
| Phobius | 1 | 47 | 47 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| PANTHER | 26 | 229 | 204 | 4.5E-79 | – | |
| PANTHER | 26 | 229 | 204 | 4.5E-79 | – | |
| Phobius | 30 | 43 | 14 | - | – | |
| TIGRFAM | 37 | 229 | 193 | 2.3E-25 | ||
| Phobius | 44 | 47 | 4 | - | – | |
| Phobius | 48 | 231 | 184 | - | – | |
| SMART | 65 | 225 | 161 | 3.7E-32 | ||
| Gene3D | 65 | 230 | 166 | 8.1E-18 | ||
| SUPERFAMILY | 67 | 229 | 163 | 2.09E-28 | ||
| Pfam | 68 | 224 | 157 | 2.3E-29 | ||
| CDD | 74 | 230 | 157 | 1.75318E-34 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. |
Expression pattern of LotjaGi3g1v0554100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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