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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0008300 |
| Transcript ID | LotjaGi4g1v0008300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Tonoplast dicarboxylate transporter-like protein; TAIR: AT5G47560.1 tonoplast dicarboxylate transporter; Swiss-Prot: sp|Q8LG88|TDT_ARATH Tonoplast dicarboxylate transporter; TrEMBL-Plants: tr|G7JLM6|G7JLM6_MEDTR Tonoplast dicarboxylate transporter-like protein; Found in the gene: LotjaGi4g1v0008300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:1134165..1139459) extracted from Lotus japonicus Gifu genome v1.2.
ATGACAGGAGAACACAGTGCCACATCTTCCCCCGATGAGCTCAACCTCAAAGCCCCACTCCTCCCACTCCATCAAACACC GAGCAGCATATACAACAACCCCTTCTCCCTCAAATCCATCTTCACCCTCAAGAACCTTTACATCATCTTGGGTCCTTTGC TTTCCATCATCATCTGCCTCTTCGTTAAGCTTGATGGTGCTCCCAAAACTTCCCAGAATATGCTCGCCGTCATCGCCTGG GTTTTCACCTGGTGGGTAACTTCCGCCGTGCCGCTTCCGGTGACCTCCATGTGTCCCCTGTTTCTGTTCCCTCTGTTTGG GATTTCCTCTGCTGATACCGTCGCTCACTCTTACATGGACGATGTCATTACTCTTGTCTTGGGAAGTTTCATCCTCGCTC TCGCCGTTGAACGCTACAACGTTCATCGAAGATTGGCCTTGACCGTGAGTTGCTCTATGCTCTGCTCTTCTCTCCCCTGT TCTGTTCCTCTTTAATTTTTTATTTTTTATTTTTGAAATTCTCTTTAATTAATTAATTAATTAATCTCCAAGTTAATTGG TATTAGCTGGTCAGATTAGATTTAATTTGTGGTCTTAATTCCAAGTTCTGATCAAATGTCTTCCATTTATTGATTGATTT GATTTGTGAAGATTAAAGATTTAGTTGGTAACCACTAATTCTCCATTATTGTCCTGAGGAAATAATTGATGCTAGGACAG GGCAATGGCAGTTATCCAATGTTGACGTGGAAATTTTTCTATCTTCTCATGTGTGCTTTGTTTTTTTTTTTTAATTATTT TCATTAACCATTCAAAGGATATAGCATTTATTTCAAATTGTTTTTTTGTTCAAAAGATACATGTATTATCTCATCTTTAT CATTTTTTTTAGGAAAGGGCTGGCAACAATCTCTATGACAACCTCTTTTAGCAGTTTATATGTAATTGATTAAAATTCAT GCATGACCTACCAAATTGTGCGTGAAGCTAATTCAGTAGAAAAGAAATGTTAAAAATGATGTTGCTAGCATTTATCTATG ACTTTATGAGGAATCCAATTAAATGTATGTGTGTCATTTCTCTTGTGGGTTGGTGAAAGTGATAGTATAGTATCTTATAA GAATCAAAGTAATAGTACAAATAAATGATTATAATAAATAAATCTAGTCTTGAATAATTAAAATTAAAATATTAAGTTAT TGATATTTTTAAGTGATTGTAACCATTAAGTAACTTAACCGTTCATCATTAGATTTAACAATCAAAATTTCTTGATATTA TTTTTCAAATAAGAAAACTATTCTTATAAGATACATCACACGTGATACATGTAGTAAAAAGGAAAAAAAAAATGCTGCAA GCAAACAATTTTTTTCAACATTCTTAAAATGATGAAATTCATGTGAGAATGATTGAAAATGTGAGTCACAATTTCAATTT AGTATGAGCCACATGTATGTATTGGTAGCACTTACAAAAAAACAAACAGACATTTATTTAGTTACAAGTTACATCCATTT TGTAAGGTGGAAAATGAGAGCTATTTATATTTTAAGATGTACAAAAAAGAAACAAAAATAATTTGAGGTGGTCTGATAAT TGGTTTAATTTGGATTGTGTGAAGGTGACATCAGTGTTTTGTGGTGACCCGTTGAATCCTGGCCTTCTCCTATTGGGCCT GTGCGCCACGTCATTCTTCGTGAGCATGTGGATGCACAACGTGGCAGCCGCAGTGATGTTGATGCCGGTGGCGACGGGGA TCTTACAGCGGCTGCCGCCACCGGAGGAGCAGTCGGAGCTGGTGAACAAGTTCAGCAGAGCGGTGGTGCTGACGGTGGTG TACGCGACGCCGATCGGAGGGATAAGCACTTTGACGGGGACAGGTGTGAACCTGATATTGGTGGGAATGTGGAAGAGCCT TTACCCTGGAGGGAAACCAATCAGCTTCAACACGTGGTTCTTCTTCGCTTTCCCTTTTGCTATTCTCTTCTTGTTCTCGT TCTGGTGCATCGTTTGCTTGCTCTATCTCAAAAAGGGTTCGGGTCCTGCTTTGTCTTCTTATCTCAGCAGAGCACACTTG AAGAGGGACCTAGAAGCTCTGGGTAAGTTTCTTAATCTCTTATTGGGTTAATAGTCAAATACTCAAATGTTTATAAACGA GTTTGATTTTAGTTTTTAGGTTGAAAAATAATTATTGTGGCGGTCATTTTTACAACTATGAATTATTTTTTTACCACTAC TAAGTTTCATTTTTCCGTTGAATAAATAAATCAAACTCATTTAATTAGAGACTAATTTAATCATAAACTATTTCTTTTTC ATCATTATTCAGAAAGAGTTCTCTAAATTAACAAATCTTGGTTAAATCACTCTAATAGATAAATCAATGAATGATATATA AGATATGTGACATAAATTTCATATATATTATATCATACTATATGTTAAATATGGTTGGTTCATGAAGGACTAAAGTGATT TAATATAAACTTTACATAGAATTATTTAGATAACTCACATATTGATATATTTTTTTGAAACTCACATATTGTCATATTGA TATTAGTGTTATGTTAATTGTGGGTGAGAAAAATAGTGGAGAAAAAGTCTTGCTTGCATTCTTTCCCTAATTCTTTATGC TTCTTTGTCGTTTTCGTTCTGTTCTCGGAACCCTAATTATTTCTGTTCTCATTGCCCCATGGAACATTTTGGGTCCATTT GCATGTTCAGTGGTGGCACTTGCCAAATTATCCCTGCACTTAATTTTCTTTTCGAGAGGAAACCCTTAATTTACCTTTTT ACTGTTTTCATTTTGAGAAAAATGTGGTTAACAATTTTTTATATATAAATATATGTTGTTTACAACTTGAGATTAGGTAG TGCGGATTGGTTAACGGTAAAAAATTGATCTAGTAGAGTATGATAGAGTCTTATATGTTACAGGATTTGAACCACACTAA TTCTTTTGTGATGAGATAAATGTAAATTTTCTGTAAATATTTTTTGAGCCTGACAACTCTTTCGCAATGGCACCTGAATT TTCTCTACCAAACACCTAGTGGGGGTGGAAATAATTAATCTTATCTAAATTTGAAAAAAGTTAGAATTGTCCACGTAGCC AATCTTACCTGAAGTTGGGAGAGAGTAGAGACCCCCTTCCCAGTCTTTATCCAGTTTACATTGTTTACATTAGACCTGAT CTCATATTAATTATTAGTCTATTTTTCAAATAATTATGTTAAAGTTTTCAAATATGTATTTAATTATAAAGGTCAATTTT AAGGTTGTCAAAAAGCATTTTAAACTTAAGTTGACAGTCTATTTGAATATTTTATATTTGAATGAATATAAATAGTTATA TAATATTGTAACCATTATTGTCATTTTTTTTTGAAATTATTGTCATTGTTGTTATTGTTATGTTAAGATTTTATTATATA ATGTTTTGAGAATATATATTTTTATTATTAAATATTTAGGTCCATTGGCGTAGATAAATGCTTATACGTGATAGTGCTAT TTAAATTTTAAAAATAAAACTTCTAGATCTATATTTTGAAAAAGTTACCCTTTAAATAAATTTTATGAAAAAGTGTTTTA AAATAAATAGGTCCAATATTAGCCGTCCAAGAAATAATACATGTTTGTTTAAGGCATATTAACTTACGTGGAATGAAAAG AAACAAGAAGCGGCTGAAAGAGATTGTAATGGACCTACATGGAATATGCCTTCTCCCATTGAATAAGATGAGCACAATGT TATTACTTGGCTTAAAAACATTAAATTATTTTAGACATATATGATTCAATAATATTCAACAAAATTACATAAGCTAATAT CTTTGTAAAAAAATAAATCAGTTTAAAATCAAATAAACATACGCTTTAATCCTGAAAAATTAAGCTGATGCAGTTCTCTA ATTCTGTAATTGGTGTTTGCAGGTCCCATGTCTTTTGCTGAGAAGATGGTGTTGTCTGTCTTTGGGGTGTGTGTTTGTCT AATCACAATTTCAACTTTCATTCTAATCATGTGAAAATTTATTTTATGTTGAAGGCATTAATTAAGTAGCAGTAATTGTG ATTGCAGTTACTGATCGTATTATGGATGACAAGAAGAATCACAGATGACATTCCTGGATGGGGGTCTTTCTTTCATGGCC TTGTTGGTGATGGAAGTGTCAGTGTAAGCACTGCATATTGATCACCTTTGGGCTTTTATAGTTATTAATTACACCAATTA AAATATGACCTTTAATTTGTCTCCAATCATACAGAACAAGAACTAATTATAAGTGCATGTTTGGATGAGTGTTTGGATGA GCATTGTCGAAATTCATTTTGATACAATTGATACAATCGATTATGGTAAAAGTGAGTTGATAGTAAATTTATGTTTGGAT ACGTTTATAGGAAATTTGATTTCTATAGGATAATGTTATGAAATTCAATTATGAAATCCCACAATTGATTATATCCATCG CGGAAGCTACTATCTTTAGCTTTTCCACTAATTTTTGTATTAAAATCAATTCTCTAGCTTGATTGTCAAACATCTATATT CTATATGTACAATCACCTAAAAGTCACAATGATCAATGAGAATCGATTCTAAGGCTCCCAAATGTGGAAGCGAACACACA CTAAAGGTTTTATATAAATGCAGGTTATGGCGGCTGTGCTATTGTTCATAATCCCAAACATGAAAAAGGAAGGGGAGAAG CTAATGGACTGGAATGAATGCAAGAAGTTACCATGGAGCCTCATTTTGCTACTTGGAGCTGGGTTTGCTATAGCTGATGG AGTCCAATCTAGTGGCCTAGCAGATGTGCTTTCCAGAGCCTTAGATTTCTTAGATGATGCTCCATACCTAGCCATTGCCC CTGCAGTTAGTCTCATGAGTAGCATCATAACTGAGTTTATCACCTCCAATGATGCCACTGCCACCCTGATTATCCCACTC TTATATCACATAGCAAGGACCATGCGCGTGCATCCTCTTCTTCTTATGATTCCCGGAGCAATCGCGACCGAATTCGCTTT CTTGCTTCCAACTTCAACTCCTTCCAATGTAGTTGGATTTGCCACTGGCCATATTGAAATCCAGGACACGCTCAAAGTTG GTGTGCCTCTAAAGGTTGCTGGGATAGCTTTGCTCTCATTCTTGATGCCAACTCTAGGTAAATTATCGTTACAGAATCCT CTCATGTTAAAACTATGCTAAAATTTTGTGTATATCTTTATTTTTATATGTGTGTTTGGGTAAACAATTTTATTAAGTAC TTATTCATAAGTTAA
CDS sequence (LotjaGi4g1v0008300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGGAGAACACAGTGCCACATCTTCCCCCGATGAGCTCAACCTCAAAGCCCCACTCCTCCCACTCCATCAAACACC GAGCAGCATATACAACAACCCCTTCTCCCTCAAATCCATCTTCACCCTCAAGAACCTTTACATCATCTTGGGTCCTTTGC TTTCCATCATCATCTGCCTCTTCGTTAAGCTTGATGGTGCTCCCAAAACTTCCCAGAATATGCTCGCCGTCATCGCCTGG GTTTTCACCTGGTGGGTAACTTCCGCCGTGCCGCTTCCGGTGACCTCCATGTGTCCCCTGTTTCTGTTCCCTCTGTTTGG GATTTCCTCTGCTGATACCGTCGCTCACTCTTACATGGACGATGTCATTACTCTTGTCTTGGGAAGTTTCATCCTCGCTC TCGCCGTTGAACGCTACAACGTTCATCGAAGATTGGCCTTGACCGTGACATCAGTGTTTTGTGGTGACCCGTTGAATCCT GGCCTTCTCCTATTGGGCCTGTGCGCCACGTCATTCTTCGTGAGCATGTGGATGCACAACGTGGCAGCCGCAGTGATGTT GATGCCGGTGGCGACGGGGATCTTACAGCGGCTGCCGCCACCGGAGGAGCAGTCGGAGCTGGTGAACAAGTTCAGCAGAG CGGTGGTGCTGACGGTGGTGTACGCGACGCCGATCGGAGGGATAAGCACTTTGACGGGGACAGGTGTGAACCTGATATTG GTGGGAATGTGGAAGAGCCTTTACCCTGGAGGGAAACCAATCAGCTTCAACACGTGGTTCTTCTTCGCTTTCCCTTTTGC TATTCTCTTCTTGTTCTCGTTCTGGTGCATCGTTTGCTTGCTCTATCTCAAAAAGGGTTCGGGTCCTGCTTTGTCTTCTT ATCTCAGCAGAGCACACTTGAAGAGGGACCTAGAAGCTCTGGGTCCCATGTCTTTTGCTGAGAAGATGGTGTTGTCTGTC TTTGGGTTACTGATCGTATTATGGATGACAAGAAGAATCACAGATGACATTCCTGGATGGGGGTCTTTCTTTCATGGCCT TGTTGGTGATGGAAGTGTCAGTGTTATGGCGGCTGTGCTATTGTTCATAATCCCAAACATGAAAAAGGAAGGGGAGAAGC TAATGGACTGGAATGAATGCAAGAAGTTACCATGGAGCCTCATTTTGCTACTTGGAGCTGGGTTTGCTATAGCTGATGGA GTCCAATCTAGTGGCCTAGCAGATGTGCTTTCCAGAGCCTTAGATTTCTTAGATGATGCTCCATACCTAGCCATTGCCCC TGCAGTTAGTCTCATGAGTAGCATCATAACTGAGTTTATCACCTCCAATGATGCCACTGCCACCCTGATTATCCCACTCT TATATCACATAGCAAGGACCATGCGCGTGCATCCTCTTCTTCTTATGATTCCCGGAGCAATCGCGACCGAATTCGCTTTC TTGCTTCCAACTTCAACTCCTTCCAATGTAGTTGGATTTGCCACTGGCCATATTGAAATCCAGGACACGCTCAAAGTTGG TGTGCCTCTAAAGGTTGCTGGGATAGCTTTGCTCTCATTCTTGATGCCAACTCTAGGTGTATATCTTTATTTTTATATGT GTGTTTGGGTAAACAATTTTATTAAGTACTTATTCATAAGTTAA
Protein sequence (LotjaGi4g1v0008300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTGEHSATSSPDELNLKAPLLPLHQTPSSIYNNPFSLKSIFTLKNLYIILGPLLSIIICLFVKLDGAPKTSQNMLAVIAW VFTWWVTSAVPLPVTSMCPLFLFPLFGISSADTVAHSYMDDVITLVLGSFILALAVERYNVHRRLALTVTSVFCGDPLNP GLLLLGLCATSFFVSMWMHNVAAAVMLMPVATGILQRLPPPEEQSELVNKFSRAVVLTVVYATPIGGISTLTGTGVNLIL VGMWKSLYPGGKPISFNTWFFFAFPFAILFLFSFWCIVCLLYLKKGSGPALSSYLSRAHLKRDLEALGPMSFAEKMVLSV FGLLIVLWMTRRITDDIPGWGSFFHGLVGDGSVSVMAAVLLFIIPNMKKEGEKLMDWNECKKLPWSLILLLGAGFAIADG VQSSGLADVLSRALDFLDDAPYLAIAPAVSLMSSIITEFITSNDATATLIIPLLYHIARTMRVHPLLLMIPGAIATEFAF LLPTSTPSNVVGFATGHIEIQDTLKVGVPLKVAGIALLSFLMPTLGVYLYFYMCVWVNNFIKYLFIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 45 | 45 | - | – | |
| PANTHER | 15 | 529 | 515 | 1.0E-207 | – | |
| PANTHER | 15 | 529 | 515 | 1.0E-207 | – | |
| TMHMM | 40 | 62 | 23 | - | – | |
| Phobius | 46 | 64 | 19 | - | – | |
| Pfam | 54 | 525 | 472 | 2.0E-64 | ||
| TIGRFAM | 65 | 519 | 455 | 1.4E-60 | ||
| Phobius | 65 | 83 | 19 | - | – | |
| CDD | 75 | 530 | 456 | 2.15365E-52 | – | |
| TMHMM | 75 | 97 | 23 | - | – | |
| Phobius | 84 | 106 | 23 | - | – | |
| Phobius | 107 | 117 | 11 | - | – | |
| TMHMM | 117 | 136 | 20 | - | – | |
| Phobius | 118 | 136 | 19 | - | – | |
| Phobius | 137 | 161 | 25 | - | – | |
| Phobius | 162 | 195 | 34 | - | – | |
| Phobius | 196 | 214 | 19 | - | – | |
| Phobius | 215 | 239 | 25 | - | – | |
| TMHMM | 219 | 241 | 23 | - | – | |
| Phobius | 240 | 258 | 19 | - | – | |
| Phobius | 259 | 283 | 25 | - | – | |
| TMHMM | 261 | 283 | 23 | - | – | |
| Phobius | 284 | 303 | 20 | - | – | |
| TMHMM | 304 | 326 | 23 | - | – | |
| Phobius | 304 | 330 | 27 | - | – | |
| Phobius | 331 | 341 | 11 | - | – | |
| TMHMM | 341 | 363 | 23 | - | – | |
| Phobius | 342 | 364 | 23 | - | – | |
| Phobius | 365 | 384 | 20 | - | – | |
| TMHMM | 383 | 405 | 23 | - | – | |
| Phobius | 385 | 402 | 18 | - | – | |
| Phobius | 403 | 421 | 19 | - | – | |
| TMHMM | 420 | 442 | 23 | - | – | |
| Phobius | 422 | 442 | 21 | - | – | |
| Phobius | 443 | 462 | 20 | - | – | |
| Phobius | 463 | 482 | 20 | - | – | |
| TMHMM | 463 | 485 | 23 | - | – | |
| Phobius | 483 | 511 | 29 | - | – | |
| TMHMM | 512 | 534 | 23 | - | – | |
| Phobius | 512 | 537 | 26 | - | – | |
| Phobius | 538 | 547 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0008300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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