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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0014000 |
| Transcript ID | LotjaGi4g1v0014000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat family protein; TAIR: AT1G11740.1 ankyrin repeat family protein; Swiss-Prot: sp|Q86YJ7|AN13B_HUMAN Ankyrin repeat domain-containing protein 13B; TrEMBL-Plants: tr|A0A0L9TTD5|A0A0L9TTD5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0014000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:1793625..1796936) extracted from Lotus japonicus Gifu genome v1.2.
AACAATAATTTGATGACCACATTCAAAACGTTTCCTATTCGATTCATCCATATCTATTAACCAATAAATACTTGTCCATA AACATAATGAACAAATTAAGAATGTGAGTTTAATTACAAATCATAGTAATATCAATATGAGATGAAACCCAGAAGACAAG AATGAGCCTGAGAAGTGAACAGCTAACTACAAAATACACTCTCTGTTCTGTGCTTTTTTTCTATCCAATCCCAATGTTTT CATTAGACCAAAATACCCTCCAATACATAAATCTTTCCTCAGGTGGAAGGGAAATGCCGAAAACCACCACCACCACCACC ACTCCTCCGACGATCAAACCGGAAAACTACGCCCACAGCCCCGTCCACTACGCCGTCGTATTGGCTGACCATACCACTCT TTCTACAATCATCTCCACACTCCCCTCCCCACCCGACCCATCTCAAATTCGAACAGACTCAGACTCCCTCACGCAAGAAC GCATCGCCGACTACATCTCCACCGTCCTTGACCGCCGCGACGTCCCTTTCAGAGAAACCCCTCTCCACCTCGCTGTCCGT CTCAACGACATCTTCGCCGTCCGCGCACTCGCCACCGCCGGCGCTGACGCCTCCCTCCAAAACTCCGCTGGATGGAACGC TATCCAGGAAGCACTCTGCCGCCGCACCTCCGACTTCGCCCTTGTCCTCCTCAACCTCCACCACCGCAACGCCTGGTCCA AATGGCGCCGCCGTCTCCCCCGCGTCCTCGCCGCACTTCACCGCATGAGGGACTTCTACATGGAGATGTCGTTCCATTTC GAGAGCTCCGTCATTCCCTTCGTCGGCAAGATCGCGCCCTCCGACACCTACAAAATCTGGAAGCGCGACGGGAACCTCCG CGCTGACACCTCCCTCGCCGGGTTCGATGGCTTGAAGATCCAGCGCGCTGACCAGAGCTTCCTCTTCCTCGGCGACGGAG ACCAGGCGCGTGATATCCCCTCCGGCTCCCTGCTCGTCCTGAACCGCGACGACCGCAGTGTCTTCGACCCCTTCGAGAAC GCCGGAGGGCCGATGAGTGAGGCTGATGTCGCCGCATTCTGCTCCCAGACGAGCGTGTACCGTCCCGGCATGGACGTGAC GAAGGCGGAGCTCGTAGGGAGAACGAATTGGAGGAAGCAGGAGAAGACGGAGAGCGTGGGAGAGTGGAAGGCGAAGGTGT ACGATGTGCAGAACGTGGTTTTCAGCTTCCGGTCACGGAAGATTGCCGGAGCGGCGGGGAGCGAGCAGGTGCTGGATGAA GACGACGAGGGTTTTCTGGCGGCGGAGAAAAAGAAGGAGTGGGTCCCACAACCGCGGACGAAGGAGAAAGAGTACGTTAA AAGCTTACGGCCGTCGATCTGGCTGACGGAGCAGTTTCCGTTGAAGACGGAGGAGCTTCTGCCGTTACTGGACATCCTGG CCAACAAGGTCAAAGCGGTGCGGAGGCTCAGAGAGTTGCTAACTACCAAGTTACCGCCGGGAACTTTTCCAGTTAAGGTA AGGGCATTATGGGAAAATAACATTTTCATTTTCTTCTAGTATCTTTTTAATAATTTAAAAATCAGATTCTGTTTTGGCAT TTTGCTGTCATTATTAATTAGTAGTTAATAATTTTTATTAGGATTTTGACTTTTGACTTGACTTTGATTGAGAAAGAATT TGCTACCTTCAATGTGGATTTAGAACTAAGTGAAGCTTTGGTGGGACCTATGTTTGAGATGAAGAGAGATTGAGAATGGT TATTCTTACACAGTTAATATGAGAATTTTTTTTTCGGTAAGCAATTAATATGAGAATGAATTACACAACCTTATATAGAA GATTTCCTCGAAAGATAGCTGCAGTGAAAAGACCCGACCGAGGACATATGGGTTGGGGAGAGAAATGTGCGATGTAAAAA AAAGTTGTAGTAATGATATCAACTTTTTGCTTATATGTAGGACAATAAACTATTTCCTTAGAACTTCAAATCTCTCAATC TCCAATGGTTTAGTGATGATATCAACCTTCTGCTTGCTTATATGTAGGACAATAGACCATTTCCATCTTCCCTTTATTCA CTTGCTTCCCCAAGAAGTGAAATCTCACTTCTATGTGCTTACTTCTGCTGTAAGAAATTGGATTCTTGGCAAGGTTGATT GTTGAAATATTATCAACCATCAGTTTCAAAGGTTTCTTAACCTCAATTTCCATTTCACTCAGCAACTCCTCCAACTAGAG AGTCTGACAAGCAACATATGACCCTGCAATATATTCAGCTTCACACGAGGAGAGTGCAATGACATGCTGTTTCTTGGAAC TCCAGGAGGTTGGAGCTCCATGAATCTGAAACAACCTTAGATAGGAGGTTTACTAATGCTAACAAAACTAAACTCTCTTC AGCTATAGCTTTCATAACTGCCAGAACTAACTATTAAAGCTATTAACAACTTGACATTTGAATTATTACTCACAACGACC TATATGGTCGGTTTATAATTATAGCTTCAACTATGTGTTTTGGTTTTGGGTTGGTTCAGGTGGCTATACCGGTAGTTCCT ACGGTGAGGGTGGTGATTACATTTACAAAATTTGTGGAGCTGCAACCGGTGGAGCAATTCTACACACCGTTCTCAAGTCC AAGGCATTTGAGCAGTGAAACAGGCAGAGTAGATGAGGAACACAAACCAGAAAGGCATCGCTCCTCTTCATCATCATCTT CTGTTGCATACAAATGGCTGAGACGAAATAATAGCATGTCTCGTGCGGGGAATAAGCAGCAGCAACCTCAATGTTCCTCC ATGACATTGGATTGTGACACTTTTGCCATTCCTGCTGGGTATACATGGACGAGTGTGGACAGTAAATCTAGCAAAATGAA GAAATCCAAGTCTGTGAGAAAGTCCAAGTAACCCCTAGAGAGACAGGACATGAATGAACCAATAGGGATCATGTCTAATT TTGTTAATTAGGTAGGTACAGCGTCCAAATATAGAGATATAGAAAGGTTCTTAGAGAGGCACATTAGAGTTAGAGCTACA TTTCTTTGTTCACAGTTTTGTTTCACGTTTCTTAGCTATATAGATAGATTCTTTTCTTTCAATACTGCCCAAAAAGGGGC TAAAGTTAGCATGTAGCTAAGTTAAAATAACGATAATTACCACCCTACTTGTCCTAGAGATTGTCCAAATTTTCAAGACT GGTATGGCATTTGGAAAAGGATTAATTATTGTGGTCACTTTTTCATGAACTCACTACAGCTTTGTTTGGATTGGCTTTTT CATCCCTTAATCTTTGTTTAGTTGCATTGTGC
CDS sequence (LotjaGi4g1v0014000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCCTGAGAAGTGAACAGCTAACTACAAAATACACTCTCTGTTCTGTGCTTTTTTTCTATCCAATCCCAATGTTTTC ATTAGACCAAAATACCCTCCAATACATAAATCTTTCCTCAGGTGGAAGGGAAATGCCGAAAACCACCACCACCACCACCA CTCCTCCGACGATCAAACCGGAAAACTACGCCCACAGCCCCGTCCACTACGCCGTCGTATTGGCTGACCATACCACTCTT TCTACAATCATCTCCACACTCCCCTCCCCACCCGACCCATCTCAAATTCGAACAGACTCAGACTCCCTCACGCAAGAACG CATCGCCGACTACATCTCCACCGTCCTTGACCGCCGCGACGTCCCTTTCAGAGAAACCCCTCTCCACCTCGCTGTCCGTC TCAACGACATCTTCGCCGTCCGCGCACTCGCCACCGCCGGCGCTGACGCCTCCCTCCAAAACTCCGCTGGATGGAACGCT ATCCAGGAAGCACTCTGCCGCCGCACCTCCGACTTCGCCCTTGTCCTCCTCAACCTCCACCACCGCAACGCCTGGTCCAA ATGGCGCCGCCGTCTCCCCCGCGTCCTCGCCGCACTTCACCGCATGAGGGACTTCTACATGGAGATGTCGTTCCATTTCG AGAGCTCCGTCATTCCCTTCGTCGGCAAGATCGCGCCCTCCGACACCTACAAAATCTGGAAGCGCGACGGGAACCTCCGC GCTGACACCTCCCTCGCCGGGTTCGATGGCTTGAAGATCCAGCGCGCTGACCAGAGCTTCCTCTTCCTCGGCGACGGAGA CCAGGCGCGTGATATCCCCTCCGGCTCCCTGCTCGTCCTGAACCGCGACGACCGCAGTGTCTTCGACCCCTTCGAGAACG CCGGAGGGCCGATGAGTGAGGCTGATGTCGCCGCATTCTGCTCCCAGACGAGCGTGTACCGTCCCGGCATGGACGTGACG AAGGCGGAGCTCGTAGGGAGAACGAATTGGAGGAAGCAGGAGAAGACGGAGAGCGTGGGAGAGTGGAAGGCGAAGGTGTA CGATGTGCAGAACGTGGTTTTCAGCTTCCGGTCACGGAAGATTGCCGGAGCGGCGGGGAGCGAGCAGGTGCTGGATGAAG ACGACGAGGGTTTTCTGGCGGCGGAGAAAAAGAAGGAGTGGGTCCCACAACCGCGGACGAAGGAGAAAGAGTACGTTAAA AGCTTACGGCCGTCGATCTGGCTGACGGAGCAGTTTCCGTTGAAGACGGAGGAGCTTCTGCCGTTACTGGACATCCTGGC CAACAAGGTCAAAGCGGTGCGGAGGCTCAGAGAGTTGCTAACTACCAAGTTACCGCCGGGAACTTTTCCAGTTAAGGTGG CTATACCGGTAGTTCCTACGGTGAGGGTGGTGATTACATTTACAAAATTTGTGGAGCTGCAACCGGTGGAGCAATTCTAC ACACCGTTCTCAAGTCCAAGGCATTTGAGCAGTGAAACAGGCAGAGTAGATGAGGAACACAAACCAGAAAGGCATCGCTC CTCTTCATCATCATCTTCTGTTGCATACAAATGGCTGAGACGAAATAATAGCATGTCTCGTGCGGGGAATAAGCAGCAGC AACCTCAATGTTCCTCCATGACATTGGATTGTGACACTTTTGCCATTCCTGCTGGGTATACATGGACGAGTGTGGACAGT AAATCTAGCAAAATGAAGAAATCCAAGTCTGTGAGAAAGTCCAAGTAA
Protein sequence (LotjaGi4g1v0014000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLRSEQLTTKYTLCSVLFFYPIPMFSLDQNTLQYINLSSGGREMPKTTTTTTTPPTIKPENYAHSPVHYAVVLADHTTL STIISTLPSPPDPSQIRTDSDSLTQERIADYISTVLDRRDVPFRETPLHLAVRLNDIFAVRALATAGADASLQNSAGWNA IQEALCRRTSDFALVLLNLHHRNAWSKWRRRLPRVLAALHRMRDFYMEMSFHFESSVIPFVGKIAPSDTYKIWKRDGNLR ADTSLAGFDGLKIQRADQSFLFLGDGDQARDIPSGSLLVLNRDDRSVFDPFENAGGPMSEADVAAFCSQTSVYRPGMDVT KAELVGRTNWRKQEKTESVGEWKAKVYDVQNVVFSFRSRKIAGAAGSEQVLDEDDEGFLAAEKKKEWVPQPRTKEKEYVK SLRPSIWLTEQFPLKTEELLPLLDILANKVKAVRRLRELLTTKLPPGTFPVKVAIPVVPTVRVVITFTKFVELQPVEQFY TPFSSPRHLSSETGRVDEEHKPERHRSSSSSSSVAYKWLRRNNSMSRAGNKQQQPQCSSMTLDCDTFAIPAGYTWTSVDS KSSKMKKSKSVRKSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 51 | 203 | 153 | 1.6E-9 | ||
| PANTHER | 52 | 384 | 333 | 1.0E-264 | – | |
| PANTHER | 52 | 384 | 333 | 1.0E-264 | ||
| SUPERFAMILY | 116 | 202 | 87 | 1.24E-8 | ||
| ProSiteProfiles | 123 | 155 | 33 | 10.606 | ||
| ProSiteProfiles | 123 | 178 | 56 | 11.957 | ||
| Pfam | 240 | 382 | 143 | 4.1E-41 | ||
| PANTHER | 389 | 575 | 187 | 1.0E-264 | – | |
| PANTHER | 389 | 575 | 187 | 1.0E-264 | ||
| Pfam | 391 | 554 | 164 | 2.1E-48 | ||
| MobiDBLite | 484 | 513 | 30 | - | – | |
| MobiDBLite | 491 | 507 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0014000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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