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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0019100 |
| Transcript ID | LotjaGi4g1v0019100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT2G31210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q8GX46|BH091_ARATH Transcription factor bHLH91; TrEMBL-Plants: tr|C0JP25|C0JP25_LOTJA Putative basic helix-loop-helix protein BHLH14; Found in the gene: LotjaGi4g1v0019100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:2399767..2406691) extracted from Lotus japonicus Gifu genome v1.2.
TATTAAAATGCATTTCTCATTATTTAATCTGATTCATTTGCATGCATTGTCAAACAATGAGAATTTTTCATAATGTTGAA AAATATTGTTAAGAAAGTTCAGTAAACAAAAGTGTGATATAAGCAATTAATTAAGCATGGTTGAAAATTGTACACAGTCC GGATTTTTAACTCATATTGTCACTATTGATGTGGACATCTGTTGTAAATTTGTATTCAATCAATACATATCCATGAATTC TTGTAATATAGTCCTTGGCTTATAAACCATTTCATTGCAAGCCAAGTTGAGCAACATATATAAAATGTCATGGCACAAAA TATTGGGTCACATGCATGAGAAAACAAGAGCTTTCTATATTGGTACAGTAGCTTTCTTGCTGGTGTGGAGGATCACAACA AGTGCCGTTAATGGTAGATTTTAGAATCCAAACTAATGCGTTTTCTTCTGCAATCACGTTTTGTGTGAACCATACATAAT ATTGTTTTCTTTTATTTTTTTAACACTTTCTTGCACCTCGTCCTATGTCTTAAATTAGTCTCAATTTCCCTTTTTAAGAT ATGATATCAAGGAAATTATTAAAAAAAACTCATCATCAAAATTGTTACTATTTTCTTATACTTTACTTGTTTGAAAAAAA AAAATAGGTAGAGTATTTTTTATCATCTAAAAACAATGCAAAAACTATATTGATTATTTGTGCAAATATAGTCACTAGAT TGTATTGTATAATGAGTTTTATAAAGTATTATTTTTTAAGCTATAAGTATAATAAATATAAAAGTTATTCATATTGATAA CCTTGATAAAAATATTTTAAAAAATCAATATCAACAAGGATTATGGTTACATCACCCACGAAACTACACAATTGTTCACC ATAAACTGTTTCACTTTTTCTTTACATAAATCTTCGACAATCACATAATTCGTGCTTCAAAAACTACATTTCGAACATCT AGATTAATTTTGGAAGATGTTGTTATAGTTAACCAACAACTAGTAAATCAAGGCTTTGGATTTCAAGCTATATAGTCGAA TGCTGAGGAACCTAGGGGGCCTCATAGATCCACCAAATATGAATTTTGATGCTTTCAGAAAACACTTTGGAGTTCAGCTC CGACCAATAGAAAGACCTATCTACCAGAAGCTATATCATGAATGGATGAGAAAGAATGAGATCAAACACGAAGCAATAGG TGAGAAAGGATGAGATAAAAAATGGAGCTAGTTCCCAACGTATGCTATCAACATGGTTTTTTATAGGATAACCATCACCT GCAAAGCAATGGGTGAGAAAGGATGAGATCAAACATGAAGTAAATGAGTACTTCAAAGAAAGGAATAAAAGAACTAAAAC AATGTTATAGTAACAGATCAACTCAGAAGCAGAGTTTGCAATTGCCAATCAACTCTTTCTAAAACACTTCCAATCTATTA ACACACCACGTTCCATCCTTTCATAGTGTCCCACCCCCTGTGATCCCAAACCCGCATCTATGCAGATAAGCCCCTCTAGT CTACAACCCTCTTACTGCCACCAAATTCTAAGTCACTAATTCAGCTGGTTTTGAGGCATACCACCGGGTTGCTGCACCAT TCATAAACTGAGTAATGAAAACCCTGCGATTTTGCGGACAACCAGCACCACGATCTGACCTGAATTAGCTCGAAGGTCCT GAAAATTTCAGCTGGCTCACCCCTGAAAATCAAATTATTCCTCGCATTCCAATTGGCCACACAACAGCAAGGCACACCGC CCTCCAACTGATGGAGTGTATTGCTCATATTATTGTGATTATTTCGGAAAAATTCCCATGAGCTTGAGCATGTGGGCCAC TGGAAGAGGAAATATGGCTGAATTGCTTGTAACTGAACGACCCCATTTTCTTCCAATTCCTATGCCTAAAAGATTAAGCT ATGCTTTCTGAGATATTTGCCTTTTTTAGTACCCAACGTTCGTAACTCCCTCCACGGCTCTACCTTTTCTTTCTTTCTTT CTCACCACAAACTGTCTCTTAGAGTTTGTTGGACTCACACACCAAGAAGAGGGAATTCCAAATCCCTCTGTCTCAAAATT TCCATCATAAACTGTTGGAGTTTCTTTTCCTTATAGTATAGGTAATTCACAACTACAATGACAATTACTTTCTTCCTTAT TTAAGGTCCTCAAATTTCTAACTGTGTGCTAGAACCACCTTCAACAAACAAGATTCAAATGATCAAACCTCAAATATTAT TCTGAATGTTCAAAAAGCATGCCTGCTTCTCCTGGTTGATTTGTGGTGTTTAACTAATTATTCTGTCTTTTCTTGATTTC TATTTTTTCTGGTGGGTATTTTCTGTTGTGATATTTTTCTATGCACACATATAGTGTGTCAGTTTCTTTAATTTTGAATT CCTGATTCTGTTATTTTGTGCCAACTATTGCAGGTAAAGAATAACGAGTGCAGGAGACAAGCAAAAAATGCATGAGCAAA CTGGTTGCTTTGATCCCAACACAATGGCAGAAGGTGTAAGCTCTCAAAAAGATAGCTTTCCTCAAACTCTTCTTGACCCA CAACCACAATCACTTATGGTTACAGAGAACACCACAAACAGCAACAACATCATGGATAACCATTTGGTGCAAGAGGTCAT TGATGCCCCTCTCTATCAGCAATCCACTTGGGACCCTAATGTTCAAGAAGTACAAGATATGAGCTATGCTAACCATCCAG AACAACAATTTCAGCATATTGATGCACAAAACTACTGCCAAAGCTACACTCCTTCCATACTAGACCCTTCTTACCCTTCA CCAGATCTCCTAAACTTTCTCCACTTGCCCACATGCTCAGCTTCATCTTTACTCACCAATCCACCCAACATTTGCATCTC AAACCCAACTCAGAGGACACCCAATTTCCAGAACTCAATGACCTTTCTAGGAGACCTTCCAATGGGACCAGACAACACAA GTGCATCCTCAGTTCTGTATGATCCTCTATTTCATTTGAACCTGCCTCCACAGCCTCCAGCCCTCAGAGAGCTGTTCCAA TCTCTCCCCCGTGGCTACAGGTTGCCAACCAGCTCCAGGGACGATTCGCTTTTCGGTGGAGGGGATGAGATGGAGGGAGA TGGGAGCCAGCTTGACATGGGAGTGCTGGATTTCAATAGGGGCACAGCTTCTGTTGGCAAAGGAAGGGAAGGAAAAGGTG CCAAACCTTTTGCAACTGAGAAAGACAGAAGAGAGCAATTGAATGGAAAATACAAAATCTTGAGGAGTCTTATCCCTAAC CCCACCAAGGTACACAGAATCTATGCATTATCTAAATAATCTGTTTCATGTTTTTCTATGAATCAAAGCTAATAGGTTGG GTTCTGTTTAAGCCTGATAGAGCCTCTGTTGTTGGTGATGCCATTGAGTATATAAGAGAGCTGATTAGAACAGTCAATGA GCTCAAACTATTGGTGGAGAAGAAAAGACATGAGAGGGAGAGGTGCAAGAGGCCAAAAAACGAAGAGGATGCTGAGGAAA GCTGTAACATTAAGCCTTTTGGGGATCCAGATGGATACATAAGGACCTCATGGCTCCAGAGGAAATCCAAAGACAGTGAG GTTGATGTCCGAATCATCGATGATGATGTCACAATCAAATTCTTCCAGAGGAAGAAGATTAACTGCCTGCTATTTGTGTC AAAGGTTCTGGATGAACTTCAGTTGGAACTTCACCATCTTGCAGGTGGACATGTTGGTGAATATTGGAGTTTCTTGTTCA ATAGCAAGGTTGGTGTTTTTCTAGACCCAATACCCATAGAGTGATTAAAAGCTTTTTGAATAGAATTATCATATTGTCAT AATTGCATATTCAACAGCGACCTGTTTCACTGACGCAGGTAATTGAAGGTTCATCAGTCTATGCAAGTGCCATAGCCAAC AGGGTGATTGATGTTTTGGACAGTCAATACGCTGCAGCAGTTCCACAGACAAGTAGCTATTAGAGCCGTGGAAGATAGTG TCAATATCAGGAACAAAAGACATGCATGAAACTATAACATATACTGGTAGTAATAATAATAGTAGTAACAAGTTCCTGAG GACACTCAGGTGATAGTGAGATTATAAAGTTTAACAGTTTCTGACTTTCTGGTTCAAAATATAGTTTCTTCAAGTAGTAC CAAGTCCTTTTTGGGATTATGCCATCTACCATTTGTCCTCTTTTCTTTCTTTTTACATACATTTTCCATTGCTATTTTAG TTTGGTTTAGCAGGCATTATGCCAGAACAAGGACATGAAGGCATTATTTTTCTCCTCTAGTTTGGGTCATACTTTGCTGT TTCGATTTCCATGAGCAGTTTGTCATTAATATGAAATCTCAAAGCAGCAAAAATACAACTTATATGGAAATCATTATTAA GAACAAAGTAGTTTTAACTTTTAACTAGTTGTCACTTCTATTCTAATTTCTAATTTGGGCAGGGCAGCAGTTCCAAAAAA CTGCTTCTCTTGGACAACATAGAATTAAATTATTTGAAGCATCATCATCTTAGAATGAAGCTATTATCATAATTTTTGTG TTGTTAACCAAACCAATGCAAAAACATTTCTGATGTAGGCCACTGGCAGCAAAAAAGATACTGGAACAGCTATTATGCTT AAACCAAAAAAGACATACAATATAAATAATTTAAAAAAGAAAACTTGAAGGAACAAATGGGTGGCCTGCTATCTTCTCAT TATTATACCCAGGCATACTTTATCATCCACCAAGTACTGCTAAATTTAACTACAAGATGTATTGGCAAATCAAACACCTT ACCTACACTTGGTGTTGGCAAGTATCTCCTGTCACAAGAGAAGAATGATAAGGTTCCAGCCAATCCAGTTACTAATATCT TGCGGTTTGTTGGTGAGACCTAATCACTTTGACAATGAAAGAAGAGGTTTTAAGGGAGATAGTCTCTTACAAGATAACCA GAAAATGGTTGCAAAATGAGTCTGTAAACTTACCAAGCTGAACATTGAGAAAAAAATATTTAACCCTATGATTGTCAAGA CAGCAAATATCATCTCCACGACTTCCAGGCTTTGCTAACTTTCTTCGCAAGATATCTGGTAGCATTCACCCCACCAGCGG CAAGCAGACCAGATATGGCCTGCCTTGCACTTGAAACCATAACTCTCCGCCTCAGAACTCTCCGCAAGCAATTTGCAGCC TCTTCTCTTGAGCTGATTATAGTATCATGTACGATTCTACCTGAAATCATAACCCTTTTTTCCTCAAAATATGACATGCA TCCCTCGTCAGAGGTGTAATCTCCTGTTATCAAGTACCATCTAAAGATTCAAAAGAGCTAATTAAATTAATCAATTTCAG TTCATTCATAATATGACTCTTTTTATAATTCTCAATCCCCTAGGCTGATTTGACTTCAGGAACATTAACAACCGAAGCAA TAATTCAGAAACAATTCCTTGACATACTATAAATATAAGCATACCAGTTTCACTTAATTTCATCTTCTGTTCTTGCTTCA TGCTCATCTGGCTTCTGACTGATGGAGGAAGGGAAGAAACTAGAGAGCAAGCAACTGACAAGTCACAATCCTGTTTTAAA ACGTAAAAGAAGTTTCTTTACTTGGTATATCAACTCTGAAGATGCAACATTGCATCATATACAACTAGATTCAAAGGAAA CTTTTCTGTTGAGCAGTACAAATACATGACGCAGAGTACCAGAAATTATCCATAAAATGAGCTGGACGGATATTTAGAAG TAATCATTTTCAAGACCAGCAAAAAAGATATAATGTATTCATAATATATAAAACCTTAAAAATGCCACCCACAATTAAAT AGAAACCAAAGGTGGAAACTAGAAAATCCAGAAGGAGATTCAAAGCACAAAATAGCAGGAAAACATTGCTTATATTTTTT ACTTCTTAACAGACACAAAGGATAGGAAAAAATATTGCAAATATTGCATTCTCATTACAACATTAAGGGCTCTAATTCCT CTAAATTACATGTTGGACCAAGATAGAAGGAAGGAATCACAAGTTGATGCATCACACCTCACAGGTTAATCTTCATAGTG CTCATTCAGTTATATAGTAAGATAAAAAGCATATATTTATTAATACTGAAAAATAAACAAACATTAATCTCTCTTCATAA TACAAAACTTTATTTCTGATATCTAAAGACCTGAACGACCCATTTGGTGATTGGCATTTGATGAAAGTATTAAAAAATTA TTATCATTTAGCTTTTGATGTTATAACTTTGAAAGACATAGTTGCAATAACAATTATTGTATTTGAGCCACTAAGAATGC TCAAACCAGTGAAATGTTTAAGGTCTAATAAATAAAGAAATTACAAGTTTGTCTGCAATAGTTCATTGGTTAATACTTCA CTAAAGAGTCTAAAGAGCAACAAAGCTAAATTCCTTGAAATGCGTGATAAGAAATGGGATAATTGGTATTCAGGGCTCAG TTAACATATCTCTAATTTAGGATGAATTAACCAAAAGAATGGCTAATCAGTCGACATTTACTATATATGGGGAAGTTGTT CACCACTTTTGTGATTAATCAGTGTCCAGAAATTATGTTGATAAAATATCCTAAATTCTGATTCTCCTAAAGAAATTAGT AGGAAAAAAAAAACCTGAGAGACTTGTATTGGGCGATTGGCAGTTGATGAAAGTCTCAATAACTTCTTAGCCTCATATTC TTCAAGAAATGGCTTATAGATTGAGTGGAATAGATCAAACTGCCCACTTACAATATTCTTCACCTGGACAGATTGTGGAC AAAGGAAACTCGGTCAAAAACCAAGGCAAATAGGATCCATATATGATTAATATGTCTTCCTTCGCAAAGAACCACAAAAT CAAACAGTTTTCCAACAGAGAAACACCAGTCAGTTAATAATTGGA
CDS sequence (LotjaGi4g1v0019100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATGAGCAAACTGGTTGCTTTGATCCCAACACAATGGCAGAAGGTGTAAGCTCTCAAAAAGATAGCTTTCCTCAAAC TCTTCTTGACCCACAACCACAATCACTTATGGTTACAGAGAACACCACAAACAGCAACAACATCATGGATAACCATTTGG TGCAAGAGGTCATTGATGCCCCTCTCTATCAGCAATCCACTTGGGACCCTAATGTTCAAGAAGTACAAGATATGAGCTAT GCTAACCATCCAGAACAACAATTTCAGCATATTGATGCACAAAACTACTGCCAAAGCTACACTCCTTCCATACTAGACCC TTCTTACCCTTCACCAGATCTCCTAAACTTTCTCCACTTGCCCACATGCTCAGCTTCATCTTTACTCACCAATCCACCCA ACATTTGCATCTCAAACCCAACTCAGAGGACACCCAATTTCCAGAACTCAATGACCTTTCTAGGAGACCTTCCAATGGGA CCAGACAACACAAGTGCATCCTCAGTTCTGTATGATCCTCTATTTCATTTGAACCTGCCTCCACAGCCTCCAGCCCTCAG AGAGCTGTTCCAATCTCTCCCCCGTGGCTACAGGTTGCCAACCAGCTCCAGGGACGATTCGCTTTTCGGTGGAGGGGATG AGATGGAGGGAGATGGGAGCCAGCTTGACATGGGAGTGCTGGATTTCAATAGGGGCACAGCTTCTGTTGGCAAAGGAAGG GAAGGAAAAGGTGCCAAACCTTTTGCAACTGAGAAAGACAGAAGAGAGCAATTGAATGGAAAATACAAAATCTTGAGGAG TCTTATCCCTAACCCCACCAAGCCTGATAGAGCCTCTGTTGTTGGTGATGCCATTGAGTATATAAGAGAGCTGATTAGAA CAGTCAATGAGCTCAAACTATTGGTGGAGAAGAAAAGACATGAGAGGGAGAGGTGCAAGAGGCCAAAAAACGAAGAGGAT GCTGAGGAAAGCTGTAACATTAAGCCTTTTGGGGATCCAGATGGATACATAAGGACCTCATGGCTCCAGAGGAAATCCAA AGACAGTGAGGTTGATGTCCGAATCATCGATGATGATGTCACAATCAAATTCTTCCAGAGGAAGAAGATTAACTGCCTGC TATTTGTGTCAAAGGTTCTGGATGAACTTCAGTTGGAACTTCACCATCTTGCAGGTGGACATGTTGGTGAATATTGGAGT TTCTTGTTCAATAGCAAGGTAATTGAAGGTTCATCAGTCTATGCAAGTGCCATAGCCAACAGGGTGATTGATGTTTTGGA CAGTCAATACGCTGCAGCAGTTCCACAGACAAGTAGCTATTAG
Protein sequence (LotjaGi4g1v0019100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHEQTGCFDPNTMAEGVSSQKDSFPQTLLDPQPQSLMVTENTTNSNNIMDNHLVQEVIDAPLYQQSTWDPNVQEVQDMSY ANHPEQQFQHIDAQNYCQSYTPSILDPSYPSPDLLNFLHLPTCSASSLLTNPPNICISNPTQRTPNFQNSMTFLGDLPMG PDNTSASSVLYDPLFHLNLPPQPPALRELFQSLPRGYRLPTSSRDDSLFGGGDEMEGDGSQLDMGVLDFNRGTASVGKGR EGKGAKPFATEKDRREQLNGKYKILRSLIPNPTKPDRASVVGDAIEYIRELIRTVNELKLLVEKKRHERERCKRPKNEED AEESCNIKPFGDPDGYIRTSWLQRKSKDSEVDVRIIDDDVTIKFFQRKKINCLLFVSKVLDELQLELHHLAGGHVGEYWS FLFNSKVIEGSSVYASAIANRVIDVLDSQYAAAVPQTSSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 437 | 437 | 2.2E-155 | – | |
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 437 | 437 | 2.2E-155 | – | |
| ProSiteProfiles | 242 | 291 | 50 | 14.087 | ||
| Gene3D | 245 | 301 | 57 | 8.8E-11 | ||
| SUPERFAMILY | 247 | 310 | 64 | 1.51E-13 | ||
| SMART | 248 | 297 | 50 | 3.6E-10 | ||
| Pfam | 248 | 291 | 44 | 2.1E-9 | ||
| CDD | 251 | 291 | 41 | 5.14731E-10 | ||
| Coils | 288 | 308 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi4g1v0019100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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