Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0019100 |
| Transcript ID | LotjaGi4g1v0019100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT2G31210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q8GX46|BH091_ARATH Transcription factor bHLH91; TrEMBL-Plants: tr|C0JP25|C0JP25_LOTJA Putative basic helix-loop-helix protein BHLH14; Found in the gene: LotjaGi4g1v0019100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:2400574..2404149) extracted from Lotus japonicus Gifu genome v1.2.
AAAAATATTTTAAAAAATCAATATCAACAAGGATTATGGTTACATCACCCACGAAACTACACAATTGTTCACCATAAACT GTTTCACTTTTTCTTTACATAAATCTTCGACAATCACATAATTCGTGCTTCAAAAACTACATTTCGAACATCTAGATTAA TTTTGGAAGATGTTGTTATAGTTAACCAACAACTAGTAAATCAAGGCTTTGGATTTCAAGCTATATAGTCGAATGCTGAG GAACCTAGGGGGCCTCATAGATCCACCAAATATGAATTTTGATGCTTTCAGAAAACACTTTGGAGTTCAGCTCCGACCAA TAGAAAGACCTATCTACCAGAAGCTATATCATGAATGGATGAGAAAGAATGAGATCAAACACGAAGCAATAGGTGAGAAA GGATGAGATAAAAAATGGAGCTAGTTCCCAACGTATGCTATCAACATGGTTTTTTATAGGATAACCATCACCTGCAAAGC AATGGGTGAGAAAGGATGAGATCAAACATGAAGTAAATGAGTACTTCAAAGAAAGGAATAAAAGAACTAAAACAATGTTA TAGTAACAGATCAACTCAGAAGCAGAGTTTGCAATTGCCAATCAACTCTTTCTAAAACACTTCCAATCTATTAACACACC ACGTTCCATCCTTTCATAGTGTCCCACCCCCTGTGATCCCAAACCCGCATCTATGCAGATAAGCCCCTCTAGTCTACAAC CCTCTTACTGCCACCAAATTCTAAGTCACTAATTCAGCTGGTTTTGAGGCATACCACCGGGTTGCTGCACCATTCATAAA CTGAGTAATGAAAACCCTGCGATTTTGCGGACAACCAGCACCACGATCTGACCTGAATTAGCTCGAAGGTCCTGAAAATT TCAGCTGGCTCACCCCTGAAAATCAAATTATTCCTCGCATTCCAATTGGCCACACAACAGCAAGGCACACCGCCCTCCAA CTGATGGAGTGTATTGCTCATATTATTGTGATTATTTCGGAAAAATTCCCATGAGCTTGAGCATGTGGGCCACTGGAAGA GGAAATATGGCTGAATTGCTTGTAACTGAACGACCCCATTTTCTTCCAATTCCTATGCCTAAAAGATTAAGCTATGCTTT CTGAGATATTTGCCTTTTTTAGTACCCAACGTTCGTAACTCCCTCCACGGCTCTACCTTTTCTTTCTTTCTTTCTCACCA CAAACTGTCTCTTAGAGTTTGTTGGACTCACACACCAAGAAGAGGGAATTCCAAATCCCTCTGTCTCAAAATTTCCATCA TAAACTGTTGGAGTTTCTTTTCCTTATAGTATAGGTAATTCACAACTACAATGACAATTACTTTCTTCCTTATTTAAGGT CCTCAAATTTCTAACTGTGTGCTAGAACCACCTTCAACAAACAAGATTCAAATGATCAAACCTCAAATATTATTCTGAAT GTTCAAAAAGCATGCCTGCTTCTCCTGGTTGATTTGTGGTGTTTAACTAATTATTCTGTCTTTTCTTGATTTCTATTTTT TCTGGTGGGTATTTTCTGTTGTGATATTTTTCTATGCACACATATAGTGTGTCAGTTTCTTTAATTTTGAATTCCTGATT CTGTTATTTTGTGCCAACTATTGCAGGTAAAGAATAACGAGTGCAGGAGACAAGCAAAAAATGCATGAGCAAACTGGTTG CTTTGATCCCAACACAATGGCAGAAGGTGTAAGCTCTCAAAAAGATAGCTTTCCTCAAACTCTTCTTGACCCACAACCAC AATCACTTATGGTTACAGAGAACACCACAAACAGCAACAACATCATGGATAACCATTTGGTGCAAGAGGTCATTGATGCC CCTCTCTATCAGCAATCCACTTGGGACCCTAATGTTCAAGAAGTACAAGATATGAGCTATGCTAACCATCCAGAACAACA ATTTCAGCATATTGATGCACAAAACTACTGCCAAAGCTACACTCCTTCCATACTAGACCCTTCTTACCCTTCACCAGATC TCCTAAACTTTCTCCACTTGCCCACATGCTCAGCTTCATCTTTACTCACCAATCCACCCAACATTTGCATCTCAAACCCA ACTCAGAGGACACCCAATTTCCAGAACTCAATGACCTTTCTAGGAGACCTTCCAATGGGACCAGACAACACAAGTGCATC CTCAGTTCTGTATGATCCTCTATTTCATTTGAACCTGCCTCCACAGCCTCCAGCCCTCAGAGAGCTGTTCCAATCTCTCC CCCGTGGCTACAGGTTGCCAACCAGCTCCAGGGACGATTCGCTTTTCGGTGGAGGGGATGAGATGGAGGGAGATGGGAGC CAGCTTGACATGGGAGTGCTGGATTTCAATAGGGGCACAGCTTCTGTTGGCAAAGGAAGGGAAGGAAAAGGTGCCAAACC TTTTGCAACTGAGAAAGACAGAAGAGAGCAATTGAATGGAAAATACAAAATCTTGAGGAGTCTTATCCCTAACCCCACCA AGGTACACAGAATCTATGCATTATCTAAATAATCTGTTTCATGTTTTTCTATGAATCAAAGCTAATAGGTTGGGTTCTGT TTAAGCCTGATAGAGCCTCTGTTGTTGGTGATGCCATTGAGTATATAAGAGAGCTGATTAGAACAGTCAATGAGCTCAAA CTATTGGTGGAGAAGAAAAGACATGAGAGGGAGAGGTGCAAGAGGCCAAAAAACGAAGAGGATGCTGAGGAAAGCTGTAA CATTAAGCCTTTTGGGGATCCAGATGGATACATAAGGACCTCATGGCTCCAGAGGAAATCCAAAGACAGTGAGGTTGATG TCCGAATCATCGATGATGATGTCACAATCAAATTCTTCCAGAGGAAGAAGATTAACTGCCTGCTATTTGTGTCAAAGGTT CTGGATGAACTTCAGTTGGAACTTCACCATCTTGCAGGTGGACATGTTGGTGAATATTGGAGTTTCTTGTTCAATAGCAA GGTTGGTGTTTTTCTAGACCCAATACCCATAGAGTGATTAAAAGCTTTTTGAATAGAATTATCATATTGTCATAATTGCA TATTCAACAGCGACCTGTTTCACTGACGCAGGTAATTGAAGGTTCATCAGTCTATGCAAGTGCCATAGCCAACAGGGTGA TTGATGTTTTGGACAGTCAATACGCTGCAGCAGTTCCACAGACAAGTAGCTATTAGAGCCGTGGAAGATAGTGTCAATAT CAGGAACAAAAGACATGCATGAAACTATAACATATACTGGTAGTAATAATAATAGTAGTAACAAGTTCCTGAGGACACTC AGGTGATAGTGAGATTATAAAGTTTAACAGTTTCTGACTTTCTGGTTCAAAATATAGTTTCTTCAAGTAGTACCAAGTCC TTTTTGGGATTATGCCATCTACCATTTGTCCTCTTTTCTTTCTTTTTACATACATTTTCCATTGCTATTTTAGTTTGGTT TAGCAGGCATTATGCCAGAACAAGGACATGAAGGCATTATTTTTCTCCTCTAGTTTGGGTCATACTTTGCTGTTTCGATT TCCATGAGCAGTTTGTCATTAATATGAAATCTCAAAGCAGCAAAAATACAACTTAT
CDS sequence (LotjaGi4g1v0019100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATGAGCAAACTGGTTGCTTTGATCCCAACACAATGGCAGAAGGTGTAAGCTCTCAAAAAGATAGCTTTCCTCAAAC TCTTCTTGACCCACAACCACAATCACTTATGGTTACAGAGAACACCACAAACAGCAACAACATCATGGATAACCATTTGG TGCAAGAGGTCATTGATGCCCCTCTCTATCAGCAATCCACTTGGGACCCTAATGTTCAAGAAGTACAAGATATGAGCTAT GCTAACCATCCAGAACAACAATTTCAGCATATTGATGCACAAAACTACTGCCAAAGCTACACTCCTTCCATACTAGACCC TTCTTACCCTTCACCAGATCTCCTAAACTTTCTCCACTTGCCCACATGCTCAGCTTCATCTTTACTCACCAATCCACCCA ACATTTGCATCTCAAACCCAACTCAGAGGACACCCAATTTCCAGAACTCAATGACCTTTCTAGGAGACCTTCCAATGGGA CCAGACAACACAAGTGCATCCTCAGTTCTGTATGATCCTCTATTTCATTTGAACCTGCCTCCACAGCCTCCAGCCCTCAG AGAGCTGTTCCAATCTCTCCCCCGTGGCTACAGGTTGCCAACCAGCTCCAGGGACGATTCGCTTTTCGGTGGAGGGGATG AGATGGAGGGAGATGGGAGCCAGCTTGACATGGGAGTGCTGGATTTCAATAGGGGCACAGCTTCTGTTGGCAAAGGAAGG GAAGGAAAAGGTGCCAAACCTTTTGCAACTGAGAAAGACAGAAGAGAGCAATTGAATGGAAAATACAAAATCTTGAGGAG TCTTATCCCTAACCCCACCAAGCCTGATAGAGCCTCTGTTGTTGGTGATGCCATTGAGTATATAAGAGAGCTGATTAGAA CAGTCAATGAGCTCAAACTATTGGTGGAGAAGAAAAGACATGAGAGGGAGAGGTGCAAGAGGCCAAAAAACGAAGAGGAT GCTGAGGAAAGCTGTAACATTAAGCCTTTTGGGGATCCAGATGGATACATAAGGACCTCATGGCTCCAGAGGAAATCCAA AGACAGTGAGGTTGATGTCCGAATCATCGATGATGATGTCACAATCAAATTCTTCCAGAGGAAGAAGATTAACTGCCTGC TATTTGTGTCAAAGGTTCTGGATGAACTTCAGTTGGAACTTCACCATCTTGCAGGTGGACATGTTGGTGAATATTGGAGT TTCTTGTTCAATAGCAAGGTTGGTGTTTTTCTAGACCCAATACCCATAGAGTGA
Protein sequence (LotjaGi4g1v0019100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHEQTGCFDPNTMAEGVSSQKDSFPQTLLDPQPQSLMVTENTTNSNNIMDNHLVQEVIDAPLYQQSTWDPNVQEVQDMSY ANHPEQQFQHIDAQNYCQSYTPSILDPSYPSPDLLNFLHLPTCSASSLLTNPPNICISNPTQRTPNFQNSMTFLGDLPMG PDNTSASSVLYDPLFHLNLPPQPPALRELFQSLPRGYRLPTSSRDDSLFGGGDEMEGDGSQLDMGVLDFNRGTASVGKGR EGKGAKPFATEKDRREQLNGKYKILRSLIPNPTKPDRASVVGDAIEYIRELIRTVNELKLLVEKKRHERERCKRPKNEED AEESCNIKPFGDPDGYIRTSWLQRKSKDSEVDVRIIDDDVTIKFFQRKKINCLLFVSKVLDELQLELHHLAGGHVGEYWS FLFNSKVGVFLDPIPIE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 407 | 407 | 1.2E-137 | – | |
| PANTHER | 1 | 407 | 407 | 1.2E-137 | – | |
| ProSiteProfiles | 242 | 291 | 50 | 14.087 | ||
| Gene3D | 243 | 300 | 58 | 8.1E-11 | ||
| SUPERFAMILY | 247 | 310 | 64 | 1.41E-13 | ||
| SMART | 248 | 297 | 50 | 3.6E-10 | ||
| Pfam | 248 | 291 | 44 | 1.9E-9 | ||
| CDD | 251 | 291 | 41 | 5.36824E-10 | ||
| Coils | 288 | 308 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi4g1v0019100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…