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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0025900 |
| Transcript ID | LotjaGi4g1v0025900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT1G29790.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9LYN3|PMTM_ARATH Probable methyltransferase PMT22; TrEMBL-Plants: tr|A0A072UPV1|A0A072UPV1_MEDTR S-adenosyl-L-methionine-dependent methyltransferase; Found in the gene: LotjaGi4g1v0025900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:3176992..3180991) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAACTTCAAACAGTATCGATTTTAATGAATTCACATGCATCCTACTATGTCGACCCCTTTCCTCATTTCTATGGGGT AGTCTTTCTATTCAATTATTCATACACGAAAAGTCTCTTTTATATCAATTTTTGTAGTTACACAAATGGACAAACTTAAA TAACCAAATTAGGTAGAAAAACAAAAGAAATAAGAGAAAATCCCACCCAGCCTTGTCTTCATTGTTGATAGAACCACACA TAGATTCTAGATTTAGATTTACATCAACTCAGTAAACCCAGATTCCTTGGTCCAAAGTTGACAGATCCTAATCCAACAGC TAAGAGTGATGGATCACAAATCCATACTCTGAATGTTCACACCATGGTATCAAACCTCAAATTGCTACTTCACTGTCTCT CACTCATCTCATTTCACTCCCATAGACTAGTCAAAATCTCCAATCCAATATCCAAAGTTTCAAACCAAACCCCATTTTGT GAAATCTTAAATACAGCATTTTAAGCTTTCCCAAAATCCAATCAAACCAAACACAAATAATCCAAAGAAAGAAAGGGATA GCAAGAGTGAGTGAGAGTGAGAGTGAGAGAGTGAGAGTGAGAGAGTGAGGTGGAAGAACAAGAGAAAAGAAGAGAAGAGG AAAGAAAAGGAAGAGAAAATGGGTTTCACATTCACCACCATGAGTCTAAACTTGGTCCTCCTAATGGCCATGGTGGCCAC CAACATCCTCTCCCTCTACCACCTCTCAACCACCCTCCAATCCCCTAAATCCACCAAACCACCACCATCAGCCCCCGTCC CAGACCAACTCCTCCGCCAGCTCCACACCATACGCGCCACCATCAACCAACTCACGCGCCTCCAACCAAATTCCAAAAAA TCCACCATCCCACCAGATCTACTCCTCTACTCTCACCTCTCCCCCATCGCCTCCTCCTGCCACAACCACCCTGACCTCCT CCACAAGTACATGACCTACACCGCTTTCTCCCTCTGCCCCTCCGATTCCGACCTCGCCGAATCCCTCATCCTCCGCGGCT GCCACCCCCTCCCCCGCCGCCGATGCTTCTCCAGAACGCCGAAGAAGCAGCAAAACTCTCTCCCTCAGAACCCTTTCCCT TCTTCCTTACCAGATTCCGGAGTCATCTGGGATCACTACACCTGCAAATCCTTCGATTGCTTGAACCGTCGAAACCCTAA CCTCGGCTTCGACACTTCCCGCGACGCGTCGAAGTTCACCTCCTACTCCGACGAGCTCGATCTACCGGTGCAGCAGCTTC TCCAGATCGCGAAGAGCGCCAAGTCGGTGCTGCGTCTCGGCCTCGACGTCGGCGGCGGGACGGGGTCCTTCGCCGCGGCA ATGAGGCTCCGGAATGTGACCGTGCTGACGACGACAATGAGCGTGGCGGCGCCGTACAGTGAGGCTGTTGCTCTGAGGGG GCTGGTGCCGCTTCACGTGCCGCTTCAGCAGCGGCTGCCGCTGTTTGACGGTGTGGTGGATGTTATCCGGTGCGGGCGCG CGGTGAACCGGTGGATTCCGGCGACGATGATGGAGTTCCTGCTGTTTGATCTGGACAGGGTGTTGAGGGGTGGAGGGTAC TTGTGGCTGGACCATTTTTTCAGCAAAGGGGTGGACCTTGAAAAGGTGTATGCGCCGTTGATCGGGAAATTGGGGTACAA GAAGGTGAAGTGGGCGACGGGGAACAAGACTGATGCTGGTGGTGTCAAGCATGGGGAGGTTTACTTGACTGTGTTGCTGC AGAAGCCTCTATCAAGATGAGGGTTGGTTGGATTTATTGGTTATATGCACAAAAGGTAGGTAGGAACCAACTAGCTATCT CTAATTGTCAAGTTTATGATTAAATGATGAGAAATTTGAAAATTGTTAGTAGCTTATGTGCTTGTTTTAGTTAAAACATG ATCTCTTGATTCTTTCAGCCTACACTGTAGATTGCATTCAAGAAATGTTGGATTTTGATTGGAAAGTGAAGATCTTAATT GAACATAAGTTGACCAGCTGGACATTGTTTAACTAAAGAGGAATGAATCCTTTTATGTTAGGTTTTCAATTGGTGAGAGA TACACACAATTTTTATATGACTTATAACATGAGATGATCCATTTCAATATAACTAGTTGCAGTATCATCGTTTTATGATG AAGGCAGTTCCTAATTATAATTAACAATTAATAGAGGTAGATGTCAACTATTGGTGATGGGCATGAGCTATCATGCTGGT CTCAAACAGAATTCTAGCTTATGAACAAACAACAGCTGCTCAGTAGTCAGCAGGTATTCCTAAGGCTAGGATGAAGCTAT TCTTCTCAGAATACTTCTTAAAGGATGAGATTGGTAGATCTCCCTCTTGCGTCACCTTTGTTAATTGGCTGACCCAACGT TGTGTGCGTGGAGAGGCGGCTAAGCTGTGAAATAATCTGAAAAATAGACTGCTGACAACTTGGTCCGATGACCAAGTTAC AATAGGATGTCTACCACCATGTGCAGTAACAGGGTAGTATGGGGACAAGGTTAGGTAGGTAGTAAGAGTTTGTAAATTAG GGAGGGCCGGAGGGGGGAAATTCTGTTGTACCATTGATTGATTCAACTTTTAATGATGGAATTGAAACAATGGTTGTTTG GTAATATATCTGTAAACCAAACTAAAAGATTTATTTGTTAATAATTACAATATGCTGCTGTTTGATATAAAATTAACAAG TAAGTTGCGGGCATAATTTCTCTCATTTGATGTATGACAATTTTCTAAATTTGTTTGGTTGATGTGTTATTTCTTGGTTA TAGTTCTATTGTCCTGCAGCTTCCTCTCTCGAGTTCTGATTCTGATCTGGTGTGATTTCCCCCCTAATTGTGGATATTGG ATTGCAGTTTGATATGTGCTGTAAGGAAGATAGGCATGCAAGTTTATCCCGATTTCCTTGCTCCTAAGTTTTTGTGGGGC ACATAAAGAAGCAATGTTTATGTCCACCGTGAAGGATCGTCCGGATCCTGTAAAAGAATCAACCCATTGGAAGAAAGCTA GAAGAAACTCAAGGACATGTGTATATCCAAGGGGGAACTGGTAGAGGGAAATAGCCTTTATGATCTTTCTTACTTCTCAT TTGATTAAATTGTTCTTTCCCAATAATTTAGTTGGAAATAAATTCAAAAAACGTCGTCCCCTGGTTTGTGTTCTAGTTAT AGCGGTGCTTGGATTTATGATGATAGGATGGCCTTTTTCATTTGATATTCGATTCACATCTCTTAGAAAACTTTCATATG GATATGAATTGCACAGCAAAAGTAAAATACATGATATGCTATTTTCATATCCTAATTTACTAATAGCATGTCCGATTGGG TAACTGAGTAGATTTGATAAATTAGAGAGGTCATGAAAATTATCATGTGGTGATTAAGAACATATTGTGCGATGCATTAG TCATGAATTTGAATTAGATTTTAATTTTTTTGCAATGCTAACAAAGTCAACCATCCCACTGTATTAGATTAAAGATGATA AATAAATAAGTTGTGAAACAAATTAAAATTTATATGCAAATGAAAAGATTAGAGATGCATAAAGATGAGTAGAAGGTGGC ACTCCCTTGACTAGAGTCATTGCATCCATATAATCGGATGGTGAACCTTCACCACACAGAGAGAAGAGAATGCTTGTGCG GACTTTTTGGCAAAGCATTGGTAGTGATTGAGCTGCCACTTCCTGGTTTGAGGTTGCTTCTTCTCGCGGATGCGTAAGGT GTCTCCTCTATGGGGACATAGTTTTTTCTTTTTCAGCTCATGTACCAAAAAAAAAAAGGAAAGATTAGAGAATTTAAGAA TTTCAATTGAATGAGAATGTTTGGTTCTATGATTGTTCTTCACACTATGTGTTTCACTCTCATACAAGTATTATGTTTGT ATTTATACTTCAAAAGCCATAGTGTTGAACACAAACCTTCAATATTCATAGAACAACAAATTGTATTCACTTAAGAGGTC
CDS sequence (LotjaGi4g1v0025900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTTCACATTCACCACCATGAGTCTAAACTTGGTCCTCCTAATGGCCATGGTGGCCACCAACATCCTCTCCCTCTA CCACCTCTCAACCACCCTCCAATCCCCTAAATCCACCAAACCACCACCATCAGCCCCCGTCCCAGACCAACTCCTCCGCC AGCTCCACACCATACGCGCCACCATCAACCAACTCACGCGCCTCCAACCAAATTCCAAAAAATCCACCATCCCACCAGAT CTACTCCTCTACTCTCACCTCTCCCCCATCGCCTCCTCCTGCCACAACCACCCTGACCTCCTCCACAAGTACATGACCTA CACCGCTTTCTCCCTCTGCCCCTCCGATTCCGACCTCGCCGAATCCCTCATCCTCCGCGGCTGCCACCCCCTCCCCCGCC GCCGATGCTTCTCCAGAACGCCGAAGAAGCAGCAAAACTCTCTCCCTCAGAACCCTTTCCCTTCTTCCTTACCAGATTCC GGAGTCATCTGGGATCACTACACCTGCAAATCCTTCGATTGCTTGAACCGTCGAAACCCTAACCTCGGCTTCGACACTTC CCGCGACGCGTCGAAGTTCACCTCCTACTCCGACGAGCTCGATCTACCGGTGCAGCAGCTTCTCCAGATCGCGAAGAGCG CCAAGTCGGTGCTGCGTCTCGGCCTCGACGTCGGCGGCGGGACGGGGTCCTTCGCCGCGGCAATGAGGCTCCGGAATGTG ACCGTGCTGACGACGACAATGAGCGTGGCGGCGCCGTACAGTGAGGCTGTTGCTCTGAGGGGGCTGGTGCCGCTTCACGT GCCGCTTCAGCAGCGGCTGCCGCTGTTTGACGGTGTGGTGGATGTTATCCGGTGCGGGCGCGCGGTGAACCGGTGGATTC CGGCGACGATGATGGAGTTCCTGCTGTTTGATCTGGACAGGGTGTTGAGGGGTGGAGGGTACTTGTGGCTGGACCATTTT TTCAGCAAAGGGGTGGACCTTGAAAAGGTGTATGCGCCGTTGATCGGGAAATTGGGGTACAAGAAGGTGAAGTGGGCGAC GGGGAACAAGACTGATGCTGGTGGTGTCAAGCATGGGGAGGTTTACTTGACTGTGTTGCTGCAGAAGCCTCTATCAAGAT GA
Protein sequence (LotjaGi4g1v0025900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFTFTTMSLNLVLLMAMVATNILSLYHLSTTLQSPKSTKPPPSAPVPDQLLRQLHTIRATINQLTRLQPNSKKSTIPPD LLLYSHLSPIASSCHNHPDLLHKYMTYTAFSLCPSDSDLAESLILRGCHPLPRRRCFSRTPKKQQNSLPQNPFPSSLPDS GVIWDHYTCKSFDCLNRRNPNLGFDTSRDASKFTSYSDELDLPVQQLLQIAKSAKSVLRLGLDVGGGTGSFAAAMRLRNV TVLTTTMSVAAPYSEAVALRGLVPLHVPLQQRLPLFDGVVDVIRCGRAVNRWIPATMMEFLLFDLDRVLRGGGYLWLDHF FSKGVDLEKVYAPLIGKLGYKKVKWATGNKTDAGGVKHGEVYLTVLLQKPLSR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 6 | 372 | 367 | 5.5E-192 | – | |
| PANTHER | 6 | 372 | 367 | 5.5E-192 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 12 | 30 | 19 | - | – | |
| Phobius | 31 | 373 | 343 | - | – | |
| Gene3D | 189 | 339 | 151 | 8.6E-6 | – | |
| SUPERFAMILY | 196 | 345 | 150 | 4.31E-10 | ||
| Pfam | 204 | 316 | 113 | 5.9E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi4g1v0025900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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