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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0029900 |
| Transcript ID | LotjaGi4g1v0029900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q4PT23|WTR6_ARATH WAT1-related protein At1g25270; TrEMBL-Plants: tr|A0A072UPI4|A0A072UPI4_MEDTR WAT1-related protein; Found in the gene: LotjaGi4g1v0029900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:3679449..3684885) extracted from Lotus japonicus Gifu genome v1.2.
CAGCCCAAACTTGAAGCCAATGTGTCTCCTTATCAATGCTAAACTTCATGTCTGCTTGATATAGCATAGAGACCCAAAAC TATCGTCAGCAAATATCTCACAGAAACGTTTCTTGAATTACAAATTTCATTCCAATTACAGGTATATGCCAATGTTTAAT ATAATGAAAACAACATGAAGATATGAAGATTTCTAGCTTCTTGTTCATTGAGTCTCAAAACATTTATACTTCAAAAAGCC AAGGTTGAATTTAATTTTAGGGACCCAAATATGGTTAATTTGTGCAAGTTTGTAGCCATAGATGGTGTGAAGCCAATACT GTTAATGATAGTGGTCCAGGGTATACATGCATTGCTTAGTATTATGATAAAGATGGTAACAAATGATGGAAAAAGCTTAA GTGTTCTTGTTGCCTACCGGTTCCTCTTTTCTGCTACTTTCAATGTTCCTGTTGCTCTCCTCTTTGAAAGGTGTGTCCCT CTTTTGAATTAGCCTTTTCCATTGGAGAGTAACATACTACAATCTTATGTTAGAACTTATTGACTAGAAAATGCACTAAA TAAGCTTAAATAAGTGTTCTTCGTTTGAATCCAAATGGGTACTGATGCACACATTACACACACCCAAAAGAATATTAATT TTTAAACTGGCTACTACTTTTGTTAAATTATGAGTACTAATTATTTCTGCAACATTTGTTGTCTTGTTTCACCAGGAAAA GCATGCAACACATTACTGGCATAGTTCTATTCCAAGCTTTTCTTTGTGGATTATTTGGGTAGAATTTCTATTCTCTAACT GATTTTAAGACAGTCAATTTTAGCAACATGTGTTTGAGATCAGAATTTTAATTTTTCATTGATTTCAGGGGATCCTTACA ACAAAACCTCTATGCTAAATCTTTGGCCTTGATACCAGCAACATACACAATCACAATGTTAAACCTCATCCCCGTTGTTA CCTACATTATGACTGTTTCTCTTAGGTACTCCCCATAACCTAATTTCTTTTACAGTTGATTCTAAAGTCAGAATAAGCTT TTGTAAGTAGCTTTTGAGTGTCAGAATTGATTCTGGAAAAAAAGTTGATCTAGACATGCTATGATATTAGATCCAACGGT GGCGATTTGGCTGCCTTTCCTAATTTTGCAGATTGGAGAAGCCAAATCTTGGAACAAGAGCTGGCAAGGCAAAATTACTG GGAACATTAACTGGAGTTGGTGGTGCTATGATCCTCACTTTATATGAAGGGAGAAGAATATTCAACTGGCCCCTACACAT TGATTTATCGAAATATATGTCACCACCACCAGCCAATGGTTCTCGCTTGTGGGGTCTCATCCTAGCTCTGGGAACATCTC TCTGTTTCTCATTGTGGTACATAGTCCAGGTTATCATACTAACAATACCCTTCAACTACTTTTTTTTGTTGATTCTATAC AATCATATCAGCGTTTTAAATTGCGGTCTGCAATCCCAATTGTTGCCCCTTAGGTTTTTAATTTAAGGGATCACAACTGC AATTAGCAATTAGGGTCGAATCAACTAGCATTTGTCAACATTTCTGCGACATAACTGCAATCTTAATATTAAAACCCTAC ACATGATCATAAACATATAAATAGTACTAAAAACCCAAAGGAAATATACTAATTTATTTGCATGCTTGAATGAATCTGTT TGATGTTTACAATTGTTAAAAATCACAAGTTCATAGGATTCAATGTAAACTCTCTTTATCTTCATCTTCTTTTTGTAACA TCATCATATTGAATATGAACAGGCAAAGATGAGTCAGAAGTTTCCGTGGCAGTATTCAGTTGCAGCTTTAACTTCTGTAA TGAGCGCAATCCAATCCATTATATATGCTCTTTGCACTGAGAGAGATTGGAGCCAATGGAAAGTTGAATGGAACTTAAGG CTTCTAACCGAAGCTTCCGCGGTAAATGCTTGTTTTTTTTTTGTGCTTTCCAAGGTTTTAAATTGCGGTAGCGTAACTGG TTTTTGAGTATCTCATTAGCATCACGGCCACATCCCCCCACATTTATCCTGCGACGCAACAACAACGACAATCGCAATTT AACACATTGGTGCTCTCTATAGATTACTTACCTTTATGAATAAAGAGTTCGCTACACTCGAGCCAATCCTATACTTACAT AGGATAATCATAAATTCACACAGTAAATGAATCTGAGCTATTTAATCAGGATCGAACAACTCATAAGTTTTGCCAAAATC AGACAGCAAAGATAAGCTCAAAGTTTGAGCTGTCTTCTTTTGATCGAACGGCTCAAATTTTTTGACTGTGTAAATTTAGG GTTTTCTTCATAATAGAGAATTCAAGTTGGCTTAACTGCACTTTTCGTCCCCCACGTTTACCTATTGTGCGATAATAGTC CCCAACAAAAATCATTAGCATAACGCGTCCCCAACGTTTAGCGCGTTTTGCACTTTTGGTCTTCCGTCCATTTCCATCCA AATTTTAACGGAATATTCCGTAAAAAATTTAATCATAAAATAAAATAAAATTTATCCATATACATCCATCACCTTCATAT GAAAAATCCATAAACATATATGAATCTTCATCTTCTTCATCACCGTGTTCATCATATTTTTTTTTAACCAAGAAAATAAA CCATCTTCCTTACATTCTTTATGCTCTTCAACAAACAATTAAACCATATGAAAATCAGGATCAACCCCTCTCCCCAAACT TGGGAAATCTACCCACAAATATAATTAATCCTTTTCAAAACAATAACTAACCCACAAAATAAAAACTTATGCAATCTGGA AGATGGTTTTAACAAATTAGAGGGCGTAACTTGCAACAAAGCAGAGGGGCAATGTATCTATTTCCCCAAATTTGCCTGCC TCAAAAGGCTATCAAAGCTACAGAGGCTGAGAAAACAGCCCCTGGTGCCTTTTACTGTAAACGCTTGCTTAATGCCACAG GAGTAGTTGTGGTTCCTGGTTCTGGTTTCTAGATGAATAAATTTGTTGTCAATTCAACTAGTTGAATGTTGAATGCATGA CCTTAAAGGATTTAAGTTTCTCAAAAAAAATAAAACCCCCAAAATGAAGAAAATCAAAAGAACAGATCAATTAACTCAAG AACATATCAGAAAAAATGAACTAAAACAACCCAAACCTCTACAATCGAAGCCCTTCCCTCCCCTCCACCATAGAACCCAG CCACCGATTTCCACCATGCTTCTACACCCCATAAGAACCCACATCAGCCTCAGAGCCACCAAATCAGAAGAAGCCAGATC GGCCTCAGAGAAAAAGAACCCAGGTCGGCCTTAGTGCCACCATGCATAAGAACCCAGAACCTAGATCGGCCTCAGAGCCA CCATGCATAAGAAGAAGAAAGATAACAAGACCAGAAGACGAAGGGCGACAGTTTTGGAGCCTGGAACAAAGGGAGCGCGC TCTGGAGAGAGGAGGAGCAAGGTGTGTCGATGTGGGTTTTCGATCGGGCAAGGGCGGCGGGTCCTCATGGAGGTGATTGC AGCGATGCAGCTTTTAGGCGGTGGTGAAGGCTTGGGTTTCATGTTACAGAGAGAGATTGAGGGTTCACAATGGTTCAGAT CCGTCCAGATCGAACAAAAATGGGGGATTTTGGCTGTGGCTTTTGCAGCAATGGGGGTGGGGGTAGTGGTGGTTGTTCAC CAGAGGGGTTTGTGGCTTGAGTTGATTTGGTGTTCTCTAAGTTTTGATTTTGATAATAGTTTTGCTGTGTTGGGTGAATT TGATGCTAAAGAAGAGGGAGAGAGGTGAGGATGAAGGTTGAAGATGAAGATGATGATTATTATTCAATTATGTCTTTTCT TGTTTTTATTTTAATTTTTTTTCCAGAAATCTGTTAAAATTTGGATGGAAATGGACGGAAGACCAAAAGTACAAAACGCG CTAAACGTTGGGGATGCGTTATGCTAATGATTTTTGTTGGGGACCATTATCGCACAATAGGTAAACGTGGGGGACGAAAA GTGCAGTTAAGCCATTCAAGTTCATGAATAACAGATACAAAACTTTGCCGCATTCAAATGAAGTTTAGAGATGAAATTGG AAGGTCTATTTTTTTGTATTGCAGGGTATCTTGGCATCTGGGGTATGTTTTATCCTGTTAGCATATTGCGTGCGCATGAA GGGACCTTTCTTTGTGTCTGCTTTTAGCCCTCTACTGCTTGTGCTTGTGGCCCTGGCCGGTACAATTGTACTAGATGAGT ACATTACCATCGGAAGGTAAATTACTGATAGACATACAAAATTTAGCGATATACATTAGATAGACATATTAGTAGCAGAC TAGCAGTTGATGATTGTGGATGTTGAAAACTGTCAATAATGTGTATATCAAATCTGTGGCTGCCAAATTTTATGTGTACA TATAAAAAAAGTGCTCATTATTTAACTAATAGCATGTTTGAAAATTCTCATACAATTGATTTCAATGCCAAAATTAATTC CGGTGAAATGCTTGTACAAGTAACTTCTTTGTGCTAGAATCGATTATGATCACTACATTCAATTTTAATTAGACTTGCAA ATTATGAAACCTTCAAGTTTTAAGTGTCAATGCATTAATATTGGTTTGTCTGTGCAGTGTAACAGGGGCTGTGTTGATTG TGTGTGGATTGTACATGTTGTTGTGGGGTAAAAGCAAAGAATCAAAGATGGTAGAAAGTGACGATGTGTCCACAAAAGCT TCTGTTCCATGTGATTCACCTTTGGCTTGCAATCAAAAGGAGCATGATTATGTGTCAACAATTCCTTAGGATCGAGAATA ACAAATGGTGATCTGTAGTTCAAAAAAACAAATGGGGATCTGAGGGTAACAATTCATATGATCATATTATATTGAACAAT TTTTTAAAGGTATATTATAGGCTTAAATACTCTGGAGGTCCCTGGAATTGTATGACGTACGAAAATAAGTTCTTGAAATT TTTTTTTTGATTCCGGATCCCTGAAATTTTTTTTAATCAAAATATGTCCCTACCCATGTTACCAGCTTATGTGACTCTAT TTTTGCACAGTCATTGATTCCACGTGGCTTTTATAATTTTCTTTTATTACACGTGGATTAATAAAAGAAAATTAAACATT TTAAGTTTAAAATTAGTCCCTAAATTTAATTAGGTTTAGGGTTCATTTATTCACAAAATTAATTAAAAAATTAAAAACAA TACAATGACAAACCCTAATCCTAATTGAGCAGCAACACTTTCTTCTCCTTCCTAGCACCGCCACCATTGACTCAACCTTC TCCTTCCCTAACCCAAAACACAGCTGCAACACCTCTTCTCTCAACCCCGAATTAATACTCAGCTCCAAACCCTAATCACA ACAGCCACCGCTTCAAATAATCGAGATTGAGAGTAGGGATGATAATGGGTCTTGGACGCATAGGGTACCCGCACAAA
CDS sequence (LotjaGi4g1v0029900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTAATTTGTGCAAGTTTGTAGCCATAGATGGTGTGAAGCCAATACTGTTAATGATAGTGGTCCAGGGTATACATGC ATTGCTTAGTATTATGATAAAGATGGTAACAAATGATGGAAAAAGCTTAAGTGTTCTTGTTGCCTACCGGTTCCTCTTTT CTGCTACTTTCAATGTTCCTGTTGCTCTCCTCTTTGAAAGGAAAAGCATGCAACACATTACTGGCATAGTTCTATTCCAA GCTTTTCTTTGTGGATTATTTGGGGGATCCTTACAACAAAACCTCTATGCTAAATCTTTGGCCTTGATACCAGCAACATA CACAATCACAATGTTAAACCTCATCCCCGTTGTTACCTACATTATGACTGTTTCTCTTAGATTGGAGAAGCCAAATCTTG GAACAAGAGCTGGCAAGGCAAAATTACTGGGAACATTAACTGGAGTTGGTGGTGCTATGATCCTCACTTTATATGAAGGG AGAAGAATATTCAACTGGCCCCTACACATTGATTTATCGAAATATATGTCACCACCACCAGCCAATGGTTCTCGCTTGTG GGGTCTCATCCTAGCTCTGGGAACATCTCTCTGTTTCTCATTGTGGTACATAGTCCAGGCAAAGATGAGTCAGAAGTTTC CGTGGCAGTATTCAGTTGCAGCTTTAACTTCTGTAATGAGCGCAATCCAATCCATTATATATGCTCTTTGCACTGAGAGA GATTGGAGCCAATGGAAAGTTGAATGGAACTTAAGGCTTCTAACCGAAGCTTCCGCGGGTATCTTGGCATCTGGGGTATG TTTTATCCTGTTAGCATATTGCGTGCGCATGAAGGGACCTTTCTTTGTGTCTGCTTTTAGCCCTCTACTGCTTGTGCTTG TGGCCCTGGCCGGTACAATTGTACTAGATGAGTACATTACCATCGGAAGTGTAACAGGGGCTGTGTTGATTGTGTGTGGA TTGTACATGTTGTTGTGGGGTAAAAGCAAAGAATCAAAGATGGTAGAAAGTGACGATGTGTCCACAAAAGCTTCTGTTCC ATGTGATTCACCTTTGGCTTGCAATCAAAAGGAGCATGATTATGTGTCAACAATTCCTTAG
Protein sequence (LotjaGi4g1v0029900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNLCKFVAIDGVKPILLMIVVQGIHALLSIMIKMVTNDGKSLSVLVAYRFLFSATFNVPVALLFERKSMQHITGIVLFQ AFLCGLFGGSLQQNLYAKSLALIPATYTITMLNLIPVVTYIMTVSLRLEKPNLGTRAGKAKLLGTLTGVGGAMILTLYEG RRIFNWPLHIDLSKYMSPPPANGSRLWGLILALGTSLCFSLWYIVQAKMSQKFPWQYSVAALTSVMSAIQSIIYALCTER DWSQWKVEWNLRLLTEASAGILASGVCFILLAYCVRMKGPFFVSAFSPLLLVLVALAGTIVLDEYITIGSVTGAVLIVCG LYMLLWGKSKESKMVESDDVSTKASVPCDSPLACNQKEHDYVSTIP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | - | – | |
| PANTHER | 9 | 356 | 348 | 5.7E-172 | ||
| PANTHER | 9 | 356 | 348 | 5.7E-172 | – | |
| TMHMM | 13 | 33 | 21 | - | – | |
| Pfam | 14 | 154 | 141 | 5.6E-10 | ||
| Phobius | 16 | 37 | 22 | - | – | |
| Phobius | 38 | 42 | 5 | - | – | |
| Phobius | 43 | 65 | 23 | - | – | |
| TMHMM | 43 | 65 | 23 | - | – | |
| SUPERFAMILY | 49 | 160 | 112 | 1.44E-7 | – | |
| Phobius | 66 | 71 | 6 | - | – | |
| Phobius | 72 | 91 | 20 | - | – | |
| TMHMM | 72 | 89 | 18 | - | – | |
| Phobius | 92 | 102 | 11 | - | – | |
| TMHMM | 99 | 121 | 23 | - | – | |
| Phobius | 103 | 128 | 26 | - | – | |
| Phobius | 129 | 139 | 11 | - | – | |
| Phobius | 140 | 158 | 19 | - | – | |
| TMHMM | 142 | 164 | 23 | - | – | |
| Phobius | 159 | 185 | 27 | - | – | |
| TMHMM | 184 | 206 | 23 | - | – | |
| Phobius | 186 | 205 | 20 | - | – | |
| Pfam | 186 | 325 | 140 | 1.9E-12 | ||
| Phobius | 206 | 216 | 11 | - | – | |
| Phobius | 217 | 237 | 21 | - | – | |
| TMHMM | 219 | 238 | 20 | - | – | |
| Phobius | 238 | 256 | 19 | - | – | |
| SUPERFAMILY | 249 | 330 | 82 | 7.59E-10 | – | |
| TMHMM | 253 | 275 | 23 | - | – | |
| Phobius | 257 | 275 | 19 | - | – | |
| Phobius | 276 | 281 | 6 | - | – | |
| Phobius | 282 | 302 | 21 | - | – | |
| TMHMM | 282 | 301 | 20 | - | – | |
| Phobius | 303 | 307 | 5 | - | – | |
| TMHMM | 305 | 327 | 23 | - | – | |
| Phobius | 308 | 327 | 20 | - | – | |
| Phobius | 328 | 366 | 39 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0029900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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