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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0030000 |
| Transcript ID | LotjaGi4g1v0030000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q4PT23|WTR6_ARATH WAT1-related protein At1g25270; TrEMBL-Plants: tr|I3SMA9|I3SMA9_LOTJA WAT1-related protein; Found in the gene: LotjaGi4g1v0030000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:3686773..3694410) extracted from Lotus japonicus Gifu genome v1.2.
TATAACTACAAACAAAGTACTAAAAGTAAACACACTAGATGGGTAATGGAGTACTGGTTGGAATCCTAATGTGCATAGTC CCCTATAAATACTCCTTTGCTGAGCTACATTTATCTCCACACCTTCTTCTCCTTATTTCCTTTGTTCTCAAATTAACCTC CCCAGCAGAGCACCATGGTGAACATAATGAACAGGTTATGCAATTCATTGCAAGGGATGAAACCAGTGATACTAATGGTG TTTACGCAGATTGCATATGCGGCGGTGAATATCGTCTACAAGCTCGCCATAAATGATGGAATGAGCATGAGAGTCGCCAC TGCCTATCGCCTCACTTTTGCATCAGCTTTCACTGTCCCTCTTGCTCTTTTCTTTGATAGGTTTGATGATCATTGCTTAA TTTGTACCTTTACTTCTTGCTTGTTCAACTTTTATATTTTCACACTTCGAACTTAAATACACCTCATATAGTACTCACTT CATCACCATATGTACCTAACACCTTTTCTCCCCGCTTCTTTCACCTTCATTATATTTTCAAGAGACGTCGAAGCTACTCA ATACTCTCTCCGTCCTCATTTCTAAGTTCCATTTGAGAGTTTTTTTAGTCCCAAAATATAAGTCTCTTTACAACATTAAT GGAACATTTATTACTTTTTTTTTCAAACTTTACCCTCATTATTTAATATGAAAGAGGGCCTGTTTGTTTCCTGTTTTTAA AAAACTGAAAACCTGTTTGGTATATGATCTGTTTTCAAGTTTTTGAAAACAGTTGAATGAATTGTATTCCATGAATATTA TTGATGACCAAACACTCTATTTATAGAGTTACATAGTTGACTAATAATAAAAGCTAAACAAATCTAAACCTGATTACATG CGTTATTACATTGGTAAATAAATAAAGAATATTCTAATCTAATATTCTATTATATTCTAACACACCCCCGCAGTCGAAGC TGGAGGATCACTGATGCTGAGACTGGAGTGAAAATCATCATAAAGAATCTGAGGTAGGCCGTTGGGGAAAATAAAATTCC CTTCAAACTTGAAAGCGGTCGGAGAAAACTACGAGTGACCTGAAGAGGAGGAACCATTGTCGGTGTAAGGAACAACCGTT GGCGTCGGAGAGCCGAGATCGGAGTATGATCTGCCATAGGATGGACCAGGGAAAACAAAAAGAAAAAGAAAAAGTAAATT TTTTTGTGTATTGTGTTGCGGGCTAGACTAGGCTGAACTAAAACAAAACAAAAAATTTGTCTGGGCGGTCAACCGTGGGG TCGAACCGGACAGGTCGGGTTGAGCCGCAGGGCTTCTCGGGTTTGAGAAGCGAGCGGGTCGAATATGTTTGGGAGATCCA GGCCGCGGGTTGCAATGGAGATTGCAAACCCTAAGGGCGGCGACGCTGGTCCGATCTGGAAGAAGGGAGGCGTGCGTGAG GGCTGGCGGTCGTCGACGGGTCAGGCGCCAGCGATTGGAGGAAGCCGGTGGCGTGGCTGCGCGAGGAGAGGCGCGGGCCT GGGAAGATCGGATGAGATCTGGCGCGATTGGGATGGAGAAGAAGACCCAAGGCATGTTGGGCTCGCGAAGAAGGCAATTC AAGCGGCCGGCGGCGGCGTGGGGAACAGCGGCCGGAGGAGCAGTGCACAGGGGTGCGTTGCGGACGGCGGTGGTGCGCGG CTGCAGTGGTGCGTGACTGTAAGTGATTTTTTTTTTTTGAAAGAGAGAAGAAGGAGGTGAGGGAGAAACTAAAAATAAAT AAAATTAAAAAGGCGACCGCGACGCTCTACTCTAAGAGTAGAGGGCGGCGGCGGCTCAAGCGGCGGCGCTCTAAGAGTAG AGTGCGGCGGCGGGGTGGCTCAATCACGGCGAGGGACGCGCACGTGAGAGCAGCGGCGGTGGCGGCGCTCTAAGGATAGA GGGCGGCGACGACGGCTTTAGCGGCGGCCAGGAAAGCAATAAAATAACAATAAAAATAAAAGAAAAATAAAAACTAGGTC CTAGGATCGGAACTAGCTTCTGATACCATGAATGAATTATATTTCATGAATATTATTGATGACCAAACACTCTATTTATA GAGTTACATAGTTGACTAATAATAAAAGTTAAACAAATCTAAACCTGATTACATGCGTAATTACATTGGTAAATAAATAA AGAATATTCTAATATAGTATTCTATTATATTCTAACCAACAGTTCTCATTTTCAGTTTTTAAAACTAAAAACCAAAACAG CTAAAAGATGTTTTTAGCTTCTGTTTTTAGTTTTCAAATATCAGTTTTCTAAATGTTGGAAAACATGTCATTCAACCTGT TTTCTTCTTCTGAAAACTGATTTTAAAAATTGTTTCTGAAAATTGTTTTAAAAATCGAAAACAAAAACTACAACCAAACA TGCAGTGTTGTTATTTTTAAAAAATCTTAAATTAGAGAGATAAATTCATGGATAATTTAGAAAAGTTAATAAAATATTTT ACAAATCAATTGCAAATAACTAATTTTCTTAATCTTAGAGCAGAGTAAGAAGGGAGTACCATTTAAAATGTTCAAATTAC ATGTACATCTACTTTTCCATATGTAATAATCAAAAGTTAGATCCAATGGCGGAACTTAGTGTGGACATAGGGGAGCCTTG GCTCCCCCGATTTGTTTGGAAAAAATTTATATACTCCTCATAAATATTTTCTTAAGTAATAGTATATATATAGTAATTTG CCAATTTATTCTAATACTTTGCTTCGGCCCAGTGGTAAGTCCGTTTGCATTTTGCTTTGAGATGTCAGGTTCAAATCCCA GCTTCACCAATGTTTGGACTATTATTTCTTTTTCACTCCCTTTAAGCTAGTTTAGGTTCTTTTTATTATTTCTTTTTCAC TTCAGGTTTTTTTATTATTGCTAGCTTTTTCACTTCGTCTTAGCCAGCTTGGTCTAATTTTTATAAGATTAACTGGGTTG TTTAAATATTCATCTAAGTATTCATATTCATGTTTTTATTTATCTTTAATCTTGATAGTTGTTTTTACGCTATGAATTAT TAGTAGATCTATTACACGAGGTTAAAATGAATTACTATGACTTTTTTTTTCATATGAAAAGTGAGAATTTCAAATATAAT AATTTAACTAGAACATAAAAATATATATCATAAAAAAAACAATATACAATTGAGACTAATTTCTTTCAAAAAACTAGTCA TCAAAAGTAAAAGAATTTTTTTTCACGACTCATAAGATTAATGAAAAAATGTTATGCGAAGGTAAAAAAATATATCAAGA ATTTAAAAATTGAAAAAATGAGAAATAAATTTTCAACATAGTTAACATAACTTCTAATGAATTTTAATATTCAGGTATAT AAATTAGTTTAACCTTTATTTTTTTTGGTATGAATATCGCTGACAAAAACATTTTAATTTATGTAGTGAAATTTTATTTT GGCCCCCTTGAAAATTTTCTCCAAGTTCCGCCACTGGTTACATCCAATCATTCATGCATGTAATAACTGTTAGCTGCATG CTAATTGAAGATTATATATAATATATATGCCATGAATATTATGTGTACCGAACACTACTCTGTTTTCTGCGGTTGTTGGC TACCGTATCAAAAAAGATTGATATATATCCAAATAATACACTGTAAGATGGATATTTGTGACCCACAAAATGTGTTGACA CTCAAAAACTGCCATAAAAGTAGTGTATTTCACAGTGATTGACACTATAATCACTTTGCTAATTGTTTTCTTGTAATTGT TTGAAGTACCCATTGTACTTCTCTATATATATCATTTTTGCTTACCTAAAAAAAACTATAATATATGTTCATGTATCAGG ACTGCTAAAATTAAAATTTCCAACCGATGACCTGAATATTATTGTACTTGTAGGCTTGTAGCTTCTTTAAACATGATTTT GTCAATTTTATTCTGTACAGGAAGAAGAGACCAAAGATTACATTGAGGGTGCTTTTTATGGCATTTCTTTGTGGTTTGTT TGGGTACGAAAATTATTCCGCCATAAGCATTTTCAGCCACCTTATAGTATCCATATTAATTATAATGTAATTAATTAATT AACAATATATACTACTGATGATATTATTATGTAATGTTCCATTTTAGGGGAAGTTTATTTCTAAACCTTTACGCTCTGGG TTTGGCCATGACATCAGCAACGTTTATGTTGGCCGTGTTAAACCTTATTCCCGGTGTTACCTTCATCATGGCCACTTCCT TTGGGTACGTACTCAGCCTACACACACTATATATTTTATCTTCTTTTATGATCCTTCGATAAAAAGTGTTAATTAATGAA TTCTGAATTACTTTCTATACAGAAAGTTCATGAAGGTTACATGATATTTTATTAGAAATTCAAGTGAGTTGGAATCTAAT ATTGATTAAGAATGAAGCATGTGAAAATAATACTATAAAAGTTCTGACCTTCTGACGACTCATAAATTTAATGTATTTTA ATTAAAGATGTGATATTCTGTTTTCTTAGTTTCGTTCAGTGGCGGATTCAGGACCCCGGGGTCAGGGGGTTCAAATTTTT CAAATAAGCACATCGATAAAAATATAATGATGAAGTTTTATGGAATCTTTTACATGAAAGTAAAACACTAAAAGTTCAAA ATACTGAAGGATATGAAGGATATGAGTAAGAAAAACAAAAATTATACAACTCAATCAGATTACAAAGTGGAAGCTTAACT TCAAATCTAACACAATAACAATCATATATGCAAAACAAGAATGTATTGAAATAAATTGTAGCAGAGTACAAATTTTCTAA CACTCAAGAGGACCTTCAAAGAGACCAATTGAACATTATAAGATTAATAAAACCATCCACTAAAGCCCCAAACTCTTACA CGGCCAACAGATACAAAACCAACAAATATGGATCACGAACAAGGGTCCCTTAAAGGGCCAATATCAAATATTCAAATCAT TGCCTGCTTAGTTTGAATTGATATCAATGTCCTGCTGCAGACCAAAATCACCTCCTCCAAAGATTTCTTTCAGTACATAA CCCACAAATATACCAAGAATTCCACATCTGCAACTGCAACCAGCTTCAATTCCCTCACAGAGAGTCAAGACAAATTAAAG GTTCATTGATCCATTCAAAAACATAATAAAGGAAAGAGCTACATTTGGCCCTCAACCATTCCCACACCTTCAAACGACAC TTCTCAAAGATTTCCTCTGAGTCAAATCCTCCTCCCCTAAAAATCATATCATTCCTTACTGTCCAAATGTGCCAGATTAC ACATAACCAAATAGTCGATACTCCAACCTTTCTGGACCTGTAAATGATCCAAAAAAGAGAGTAAAATGTTCTCTAACAGA ACCCAGAATTACAAAACAGAAGCCAATCCATTGAAATACCAAGGACCATAATTGCCATGCGCACTGACAAGTGAAAAATA TATGCAGAACTGATTCCTCAGATATCCCGCAGAGTGGGCAACGATCATCTGCTACCTTACACTCCCAAGCCCAAATTTTG GTTTCCCAGAGTAGAATTTCAAAATTTCTTTGCAAAGAACATAACTTTACTAAAACCCCATTTGCCTCATAAACTGAGCA CATCTAAAAACTATGATTATAGCAAAAAATACACAAATATATACTACAAAATACAAAGTGAGAATCAAGCTAAGGTGATG GGTAGAAGGGATTTGAGTATTCTAAGGCTGCGATTATGACCAAATCACAAAACATGTCATAAAAATCCAGCTTGAGAAGA GAAAGGAAATCAATTTAGGGTTAGGGAAATCAGCCATACCTAGGGTAAAGCCGCAACAGAGGGCCGGCTGGACCGGTGGT CGGTGGACGGTGGTGGCGTGGTGGTGGCCGGTGGTGGTGGTGCGCCGTGCGAGAGTGTGAGGGTGTGGTGACTGGTGAGC GAGCGTGAATCGTGAGTGAGAGGGTGAGAGCGTGAGTCTGTGAGAGAGAGGGGTAAGTGAGGGTCTGGGTGCAAATATAA AATCTCAGGGGGTTCAAAAAAAACATTACAAGGGGGTAAATAGAATTTTTCTTTTTCTCAGGGGGTTCATCTGAACCCCT AACTTGGCTGTGGGTCCGCCCCTGGTTTCGTTGTTAGGCCATTTGGTACAGGCTCTAGTGCTTTGGGCTCTAATGTGGCT CACCATAATTTTGCCCCAATTTCATCAATACATTCCTTAAATGCTTTGAGTTCTTTTGATTGCTCCATTTTGATTTATAC CCTTTTGATTTTCTCTGTAGATTGGAAAAATTGAATTTCGGAGTAATAGAAGGGAAGGCTAAGGTGGCAGGAACAACAAT TGGAATTAGTGGGGCAATGTTGATGACCTTTTTCAAAGGGGTGGAAATTAACATTTCATCTTCCAAAATTAACCTTTTGC ATCCACATCAAGACCAAAATGGGCATATGGGACCACAACACGTAGACTTCAGTAATAAACTGCTAGGGGTTCCTTGTGCC TTAGCAAGCAGCTGCTCTTTTTCTTTGTGGTTAATCACTCAGGTTCTTTATTCTTTAATCAAAGTAGTGCACTTGTATAT ACCATTTTCATTTTATTGAAGGCATCTTATATATCAATAGTTTTTATTACATGACACAGGCTAAGATGAACCAAGAATAC CCGAGTCATCACTCAAGTTCAGCTTTGATGTCCGTAATGGGGGCGATCCAGTCTATTGTTCTTGCTCTTTGTGTTGATAG GGATTGGAGCCAGTGGAAGCTAGGTTACAATATTAGGCTTTTAACCGTGGCTTATTCGGTATGCTCTCAAGTTAATGAAA AAACATTATAAATCTCAAAGGGAGTATATATGTAATTATGTATATTTGATCATATTATATATATTGCAGGGGATTGTGAC TTCTGGTATTGTGGTTATTGTTATTGCATGGTGCATTAAGATGAGAGGCCCTCTATTTGCATCTGTTTTCAATCCTGTAC AGCTTTTAGCTGTGGCGATTGCTGCTTATTTATTGTTGGATGAGAAGTTATATTTAGGAAGGTAAAGTCTAATTTTACCC AACATATATGCACATATTCATGTGTTTATGGTTTTGTTCATGATTTGTTTTATAATGGGTGTATATTATATATGTAGTGT GCTCGGAGGAGTGTTGATCGTGTGTGGCTTATACGTTGTCCTTTGGGGTAAGAGCAAAGAAATGAAAAAGAAGATTCAGT TAGTGCCATTACAAAATACCACAGAGCCCCAAGTTATTGAAGTTGCTATTATGTCCACACCTGTAAATCATGATAAATGC ATTCACAACTACCAGAGTCAAACTAGTGCTATTGAGAATGTTGCTTATGATCAAAGACTAGTAGTAATAGAATAGAGTGC TAGGAAAACATTTTTAGCACACTCTGACACATACTTCTTCTTATGATTGATTTATTTTTAAAATAGTCAATGTATTTTTC TTACATATATATTAAAAAATATATGTTGACTTTTTGAAAAGTAAACAAATCTTATGAAATGTGATGAAGAGTATGTTTAA AAAAAAACGAGTTGCTAGCATTTCTATGTATCACTGAAGAACACCATGTAACCATGTTCACATGATGAAGGTAGAAGATG ATCTTCCTTGTTAAGATGGTAGAAATTAAATGATTAGG
CDS sequence (LotjaGi4g1v0030000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAACATAATGAACAGGTTATGCAATTCATTGCAAGGGATGAAACCAGTGATACTAATGGTGTTTACGCAGATTGC ATATGCGGCGGTGAATATCGTCTACAAGCTCGCCATAAATGATGGAATGAGCATGAGAGTCGCCACTGCCTATCGCCTCA CTTTTGCATCAGCTTTCACTGTCCCTCTTGCTCTTTTCTTTGATAGGAAGAAGAGACCAAAGATTACATTGAGGGTGCTT TTTATGGCATTTCTTTGTGGTTTGTTTGGGGGAAGTTTATTTCTAAACCTTTACGCTCTGGGTTTGGCCATGACATCAGC AACGTTTATGTTGGCCGTGTTAAACCTTATTCCCGGTGTTACCTTCATCATGGCCACTTCCTTTGGATTGGAAAAATTGA ATTTCGGAGTAATAGAAGGGAAGGCTAAGGTGGCAGGAACAACAATTGGAATTAGTGGGGCAATGTTGATGACCTTTTTC AAAGGGGTGGAAATTAACATTTCATCTTCCAAAATTAACCTTTTGCATCCACATCAAGACCAAAATGGGCATATGGGACC ACAACACGTAGACTTCAGTAATAAACTGCTAGGGGTTCCTTGTGCCTTAGCAAGCAGCTGCTCTTTTTCTTTGTGGTTAA TCACTCAGGCTAAGATGAACCAAGAATACCCGAGTCATCACTCAAGTTCAGCTTTGATGTCCGTAATGGGGGCGATCCAG TCTATTGTTCTTGCTCTTTGTGTTGATAGGGATTGGAGCCAGTGGAAGCTAGGTTACAATATTAGGCTTTTAACCGTGGC TTATTCGGGGATTGTGACTTCTGGTATTGTGGTTATTGTTATTGCATGGTGCATTAAGATGAGAGGCCCTCTATTTGCAT CTGTTTTCAATCCTGTACAGCTTTTAGCTGTGGCGATTGCTGCTTATTTATTGTTGGATGAGAAGTTATATTTAGGAAGT GTGCTCGGAGGAGTGTTGATCGTGTGTGGCTTATACGTTGTCCTTTGGGGTAAGAGCAAAGAAATGAAAAAGAAGATTCA GTTAGTGCCATTACAAAATACCACAGAGCCCCAAGTTATTGAAGTTGCTATTATGTCCACACCTGTAAATCATGATAAAT GCATTCACAACTACCAGAGTCAAACTAGTGCTATTGAGAATGTTGCTTATGATCAAAGACTAGTAGTAATAGAATAG
Protein sequence (LotjaGi4g1v0030000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNIMNRLCNSLQGMKPVILMVFTQIAYAAVNIVYKLAINDGMSMRVATAYRLTFASAFTVPLALFFDRKKRPKITLRVL FMAFLCGLFGGSLFLNLYALGLAMTSATFMLAVLNLIPGVTFIMATSFGLEKLNFGVIEGKAKVAGTTIGISGAMLMTFF KGVEINISSSKINLLHPHQDQNGHMGPQHVDFSNKLLGVPCALASSCSFSLWLITQAKMNQEYPSHHSSSALMSVMGAIQ SIVLALCVDRDWSQWKLGYNIRLLTVAYSGIVTSGIVVIVIAWCIKMRGPLFASVFNPVQLLAVAIAAYLLLDEKLYLGS VLGGVLIVCGLYVVLWGKSKEMKKKIQLVPLQNTTEPQVIEVAIMSTPVNHDKCIHNYQSQTSAIENVAYDQRLVVIE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | - | – | |
| PANTHER | 12 | 358 | 347 | 5.6E-189 | ||
| PANTHER | 12 | 358 | 347 | 5.6E-189 | – | |
| Pfam | 16 | 157 | 142 | 4.8E-11 | ||
| TMHMM | 17 | 39 | 23 | - | – | |
| Phobius | 18 | 38 | 21 | - | – | |
| Phobius | 39 | 49 | 11 | - | – | |
| TMHMM | 49 | 67 | 19 | - | – | |
| Phobius | 50 | 67 | 18 | - | – | |
| SUPERFAMILY | 51 | 160 | 110 | 4.18E-5 | – | |
| Phobius | 68 | 78 | 11 | - | – | |
| Phobius | 79 | 101 | 23 | - | – | |
| TMHMM | 80 | 102 | 23 | - | – | |
| Phobius | 102 | 106 | 5 | - | – | |
| TMHMM | 107 | 129 | 23 | - | – | |
| Phobius | 107 | 130 | 24 | - | – | |
| Phobius | 131 | 141 | 11 | - | – | |
| TMHMM | 142 | 160 | 19 | - | – | |
| Phobius | 142 | 160 | 19 | - | – | |
| Phobius | 161 | 195 | 35 | - | – | |
| TMHMM | 196 | 214 | 19 | - | – | |
| Phobius | 196 | 215 | 20 | - | – | |
| Pfam | 197 | 335 | 139 | 4.1E-13 | ||
| Phobius | 216 | 226 | 11 | - | – | |
| TMHMM | 226 | 248 | 23 | - | – | |
| Phobius | 227 | 246 | 20 | - | – | |
| Phobius | 247 | 265 | 19 | - | – | |
| SUPERFAMILY | 255 | 340 | 86 | 3.14E-11 | – | |
| TMHMM | 263 | 285 | 23 | - | – | |
| Phobius | 266 | 284 | 19 | - | – | |
| Phobius | 285 | 290 | 6 | - | – | |
| TMHMM | 290 | 312 | 23 | - | – | |
| Phobius | 291 | 311 | 21 | - | – | |
| Phobius | 312 | 316 | 5 | - | – | |
| TMHMM | 317 | 336 | 20 | - | – | |
| Phobius | 317 | 337 | 21 | - | – | |
| Phobius | 338 | 398 | 61 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0030000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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