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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0030100 |
| Transcript ID | LotjaGi4g1v0030100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q4PT23|WTR6_ARATH WAT1-related protein At1g25270; TrEMBL-Plants: tr|A0A151RHS8|A0A151RHS8_CAJCA WAT1-related protein; Found in the gene: LotjaGi4g1v0030100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:3709539..3713550) extracted from Lotus japonicus Gifu genome v1.2.
TGCTCATTGCCTATATACTTATATAAATATGCCTCTACTGAGCTAGAACCTCCATAGCTTATCTAAATTTCTCTATTTCC TACTTCAATCTCAAACCATAGACGCTAAAATTAAAGATGAATGATGCTAGGGAACTAGTGCGTGGGGTAAAGCCTGCCTT GTTGATGGTGTTGGTGCAGGTTGTATATGCTTCTGTGAATGTTCTATATAAGTTTGCCATCAATGATGGGATGAGCACTA GAGTGGTCACTGCCTACCGCCTTATTTTCGCAACGCCATTCACCATTTTTCTCGCTCTTATTTTTGAAAGGTATAATATT TTTCTTTTATTAATTGGAAAAATAATTTCTTGTTCTATGACCCATGCTAGCAATGATAACAGCTAAAATGGTGTTTCGTT GCCTTCTTTTATCAATTTAAAACAGAGAGAACAGGCCAAAGCTGACATGGAGGGTGCTTTTGATGTCATTCTTTTGTGGT CTATTTGGGTATGCTTCATGTCTACTCTAGCTCCATCTTCAATTTTCTTTTTCTTTTTTTCCTTGTTGAGGAGAGGAAGT TATCTAATTTTTTGTTATCCGTTCGGGAAACTGTGATGTCCCTCCCAGTAAGTAGGTTTTTCGGAGTTCAAACTACTTGG GTTCTCTTTTTTATGGAGGGATATCTAGTTTAATAAAGTTTATATTGTATACTTGTTAATTAAATGGATTATCAAAATTA ATACATTTATGTTTATCTAATGATATAACCAGAGCAAGTTTGCTACACAACCTTTTCCTTGAGGCCTTGGACCTGGTGTC AGCAACATTTGCCTCTGCCATCTTCAACCTTGTTCCTGCAGTCACTTTCGTTGTGGCCATCTTATGCGGGTAAGCACTCA CCAGTCATAATCGTGCATACATTTTTCCATTAATTTTTTCATTTCTTTTGAAAAGCAAAAGTCAGATATTCAACAGAATT GTAGCTTGAGAACAACCTTCAATTAGGGGAAACAAGTTAGTACCAAACCAGTGCCATAAAAATTTATGACTTGATTGAAA AAAAGAAGTGCTTAGAAAAACATAGATATAGTATTAGGGTAGTGTAGACTCATATATGTCATGACTCATGACCATGATTT TACAAATTAGCATCTTGATACAGAACTGAAATCTGATGTCCTTATTTATTTAGTGTTTCATTCTCTACCCAATCAATTAA ATTGTGTCATGTAAGGTCAAAATTATCATACTTATGCGACATAATTTGATTGCTAGATATCTGCAAATATGATATTGTTA ATTTAGTAACTTAAGTCTTTCCCCCATGTGTATTTGGAATTCCTTGGTATACATAAGGCTTAAAAACACTTCAATTGAAA TTATTTATCTCACAATATATTGAAATGAAAGTAATTTTTCTCATATCAGTTAAAAGAGTTTTTCTGCAAATTAATATAAC GTTAACCCAATAAGGTGTAATAAACTCTAGTGGATCACAACCTTATCACATGCAAATAATTGAGAATCTTTCTGTTTTTA CCCAATCGTTCTGTTTTTATATCTCCCTTTGGGTAGAACTTGCATTGTTTGTACATGCTCATATGGGGTGGAATAATTCT TTAAGCAATGAGTTGGTAGTGATTGAGGGATTCACTATTAATGAAAGTATGAAACCTTTTCGGCTTTATCTTGCGAGATT TTAGTGCAATTTGGCCTTGGAGTACTGGCTTTGTAACTCCACAGTTCAATTGGAGTTATTCAGAGCTGGAAATGATAAAC ATTTGCATTTAATTTTAGATATCAAATGTTTTGTTCTTACTAGGTGGTGTTTTCTTTTGGTGGATTTTGTTTTCAGGATA CATTTATATACTTTGTTTGTTGTTTTCTTTGATGGGGGTTGTTCCGGTGGATGGTGGTGTAATGGTGTATCTTTTGCTAG CTTTGGATATCTTACCTTACTGAGAATGTTGTTTCTCAAGATTTCAAACTATTTAAGAGTAAATTGTATTTTTGTACAAA AAATAAAGCTAAAACTAAAAACAATTAGTGTAGCCTATAATATAAAAAATGTCACTACTGTTACAAACTGTAAATCGATT GAGTTGAGTGTCTCAATTTTTGGATGACTAACTATCATTTTTCTACAGAAAAACTATTATACATACTCAATTTTACATGG TTGCACTAATTCTCTAAATTTAATGTAGCTTGGAGAAGTTAAATATGCAAACCGCAGCAGGGAAGGTCAAGGTGTTAGGA ACCATAGTAGGAATTGGTGGGGCAATGCTGCTGATATTTTTTAAAGGGGCAGAAATTAAAATATTTAGTGCCTTCCACAT TAATCTCCTGCATAAAAATGGCCATGTAGCAAGAGTCCATACTGGTTCTGGTACTAAATTGTGGGGTGTTCTTTGTGCTT TTGGAAGCTGCTTCAGTTTTGCATTCTGGCTCATCATTCAGGTAAACTGTTCAGGTTTGATTGACCAGTCCAATTTGTGA ACCATTTTTTTGACTTGGGATTCATTAATTTACTTGTTGATCACTATGTGGCACAGTCTAAGATGGGTACAGAGTATCCA AGAAAATACTCAAGCACGGCATTGATGATCTTAATGGGGGCAATTCAAGCCACAGTTTTTGCTCTTTGTGTTGAGAAGGA TTGGAATCAATGGAGTTTGGGTTCGAGTATTAGGCTTGTAACTGTGGCCTATGCGGTATGTTAACTTTTGGATTGAAATG GTGAACTAAAGGTTACCAATAATCAATTATGAAATTAGAATTTTAAATTGTTGCAGGGCATTGCGGCCTCTGGAGTTATG GTTGTAGTCACTGCATGGTGCGTGAGGATGAGAGGCCCAGTGTTTGTATCTGTATTCAACCCTTTGTTGCTTGTGCTTGT GGCTATTGTAGGTGCCTTGATATTAGATGAGAACTTATATGTGGGAAGGTATGTGACAAGTCCTTCTTCACTTAAATATA TTTGATTAGCATACGCGCATCAGTTACAGATTCTACCACATCAAACACTCACTTTTGATATGCGTATAAGAGGGATATGT ATCGGGGCTTATCATTATACTAAGTCTAGCTTAACTTGTGTTTATATGACATGGATTTGGAACCTCTAAAGTTTTTGAAA CACTTTAGATGGTAAAATAGGCTAATATAATCATGGATAAGAGTTCTATGATGGATCAATCACATTAAAAAGTGTACTTC AACACACAAACCATGTATTTTTTACTTATTGTAAAATGTAACATCTAGAATATATTATTTTTAATATATTTATTTCGTGT TAAAAATCAATTTATAAAGAATAACTCTTTTAATTTATGAATTTGATTTTGTTTAACAAAACCAATTTACACATGCATAA CAAATTATGATGTTAGTTTAGTACTACCTTACATGATTGTTTTATTGCAACTGTGTAGTGTAATTGGAGCTGTGCTAATT GTGTGTGGCTTGTACATGGTGCTATGGGGAAAGAGCAAAGAAACGGAAAAGGAGAATCAGTTGGGGTCATCAGAAGTCAC CCAGAAATATGAAGCAACTCACGCTGTTGTCATTTCAACGACAACAAATAATGGCAATAGTGACGGCAGTAGTAACACCA ATTGAAAGAGCAACTTAATTGCCAAGGTTCTCAATTATGACATTGAATATTAGTTGTTAGGGTCTGACAGTTATATAATG GGCAGGGCATATCTATACTATAATAGAAGATACTACTTAGTGATATGAAAGAGATACTTTGCTTTTCAAAGGGAAAAATG ATGGTTTGATGCCCTTTTTGGGGTAAAAAATAAAATAAGATGGGTTATAGGATGTACTTAAAAGAAAGAGGTTAGACAAG ATGAAGGTGAAAATGAAGTTGTGAGGGATGAAGAGTGAAAATATCAAGTTTTTTTTTTTTTCAAAAGTAATTGTTGAAGG ATTAATGGCAATCAATTTAGTATTAAGCAGACATTATTGGGCCATTTTATTCAATTTCATTTTTTTTTTATGTTTATTCA ATTTCATTTGTG
CDS sequence (LotjaGi4g1v0030100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGATGCTAGGGAACTAGTGCGTGGGGTAAAGCCTGCCTTGTTGATGGTGTTGGTGCAGGTTGTATATGCTTCTGT GAATGTTCTATATAAGTTTGCCATCAATGATGGGATGAGCACTAGAGTGGTCACTGCCTACCGCCTTATTTTCGCAACGC CATTCACCATTTTTCTCGCTCTTATTTTTGAAAGAGAGAACAGGCCAAAGCTGACATGGAGGGTGCTTTTGATGTCATTC TTTTGTGGTCTATTTGGAGCAAGTTTGCTACACAACCTTTTCCTTGAGGCCTTGGACCTGGTGTCAGCAACATTTGCCTC TGCCATCTTCAACCTTGTTCCTGCAGTCACTTTCGTTGTGGCCATCTTATGCGGCTTGGAGAAGTTAAATATGCAAACCG CAGCAGGGAAGGTCAAGGTGTTAGGAACCATAGTAGGAATTGGTGGGGCAATGCTGCTGATATTTTTTAAAGGGGCAGAA ATTAAAATATTTAGTGCCTTCCACATTAATCTCCTGCATAAAAATGGCCATGTAGCAAGAGTCCATACTGGTTCTGGTAC TAAATTGTGGGGTGTTCTTTGTGCTTTTGGAAGCTGCTTCAGTTTTGCATTCTGGCTCATCATTCAGTCTAAGATGGGTA CAGAGTATCCAAGAAAATACTCAAGCACGGCATTGATGATCTTAATGGGGGCAATTCAAGCCACAGTTTTTGCTCTTTGT GTTGAGAAGGATTGGAATCAATGGAGTTTGGGTTCGAGTATTAGGCTTGTAACTGTGGCCTATGCGGGCATTGCGGCCTC TGGAGTTATGGTTGTAGTCACTGCATGGTGCGTGAGGATGAGAGGCCCAGTGTTTGTATCTGTATTCAACCCTTTGTTGC TTGTGCTTGTGGCTATTGTAGGTGCCTTGATATTAGATGAGAACTTATATGTGGGAAGTGTAATTGGAGCTGTGCTAATT GTGTGTGGCTTGTACATGGTGCTATGGGGAAAGAGCAAAGAAACGGAAAAGGAGAATCAGTTGGGGTCATCAGAAGTCAC CCAGAAATATGAAGCAACTCACGCTGTTGTCATTTCAACGACAACAAATAATGGCAATAGTGACGGCAGTAGTAACACCA ATTGA
Protein sequence (LotjaGi4g1v0030100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNDARELVRGVKPALLMVLVQVVYASVNVLYKFAINDGMSTRVVTAYRLIFATPFTIFLALIFERENRPKLTWRVLLMSF FCGLFGASLLHNLFLEALDLVSATFASAIFNLVPAVTFVVAILCGLEKLNMQTAAGKVKVLGTIVGIGGAMLLIFFKGAE IKIFSAFHINLLHKNGHVARVHTGSGTKLWGVLCAFGSCFSFAFWLIIQSKMGTEYPRKYSSTALMILMGAIQATVFALC VEKDWNQWSLGSSIRLVTVAYAGIAASGVMVVVTAWCVRMRGPVFVSVFNPLLLVLVAIVGALILDENLYVGSVIGAVLI VCGLYMVLWGKSKETEKENQLGSSEVTQKYEATHAVVISTTTNNGNSDGSSNTN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 13 | 13 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| PANTHER | 9 | 360 | 352 | 2.0E-155 | – | |
| PANTHER | 9 | 360 | 352 | 2.0E-155 | ||
| Pfam | 13 | 154 | 142 | 7.5E-14 | ||
| Phobius | 14 | 34 | 21 | - | – | |
| Phobius | 35 | 45 | 11 | - | – | |
| TMHMM | 44 | 63 | 20 | - | – | |
| Phobius | 46 | 63 | 18 | - | – | |
| SUPERFAMILY | 47 | 156 | 110 | 2.88E-7 | – | |
| Phobius | 64 | 74 | 11 | - | – | |
| Phobius | 75 | 94 | 20 | - | – | |
| TMHMM | 75 | 94 | 20 | - | – | |
| Phobius | 95 | 99 | 5 | - | – | |
| Phobius | 100 | 126 | 27 | - | – | |
| TMHMM | 104 | 126 | 23 | - | – | |
| Phobius | 127 | 137 | 11 | - | – | |
| Phobius | 138 | 156 | 19 | - | – | |
| TMHMM | 138 | 156 | 19 | - | – | |
| Phobius | 157 | 188 | 32 | - | – | |
| Pfam | 189 | 328 | 140 | 4.5E-13 | ||
| TMHMM | 189 | 208 | 20 | - | – | |
| Phobius | 189 | 208 | 20 | - | – | |
| Phobius | 209 | 219 | 11 | - | – | |
| Phobius | 220 | 239 | 20 | - | – | |
| TMHMM | 220 | 239 | 20 | - | – | |
| Phobius | 240 | 258 | 19 | - | – | |
| SUPERFAMILY | 246 | 333 | 88 | 2.48E-9 | – | |
| TMHMM | 254 | 276 | 23 | - | – | |
| Phobius | 259 | 278 | 20 | - | – | |
| Phobius | 279 | 284 | 6 | - | – | |
| TMHMM | 283 | 305 | 23 | - | – | |
| Phobius | 285 | 304 | 20 | - | – | |
| Phobius | 305 | 309 | 5 | - | – | |
| Phobius | 310 | 328 | 19 | - | – | |
| TMHMM | 310 | 329 | 20 | - | – | |
| Phobius | 329 | 374 | 46 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0030100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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