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LotjaGi4g1v0032100.2

Overview

Field Value
Gene ID LotjaGi4g1v0032100
Transcript ID LotjaGi4g1v0032100.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description tRNA (Guanine(10)-N2)-methyltransferase like; TAIR: AT3G26410.1 tRNA modification 11 protein; Swiss-Prot: sp|Q6NS23|TRM11_XENLA tRNA (guanine(10)-N2)-methyltransferase homolog; TrEMBL-Plants: tr|I1K2S5|I1K2S5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0032100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:3943553..3950116) extracted from Lotus japonicus Gifu genome v1.2.

ACGGCTAGGAGCTTACACCAAGGTGAAGAAGTCCAGGCCTCGAGGGTTTTGGGCAGGGTTTAACAGTGTGGCGCCTTTGA GATTTTCTCAGTGCTCTTCAATCTTCAACTTGATTCATTTCGAAAGAGAGAAGATCGAAGCATGTGGTACTTGTGCGTTT TCTTCCACAGATTGTTGGATTACCGAAAACCCGAAGTTGAATCACTCGCACAACTCTTCGGAGAAGCCAACCAAAACGAC GACGACGACGTTTCATCCTCCCAGTTGCAATGGAAGCTCCCTCTTCATCACCACCCTGATTCTCCTTTCCACCTCGTCAA TCTCCCTTCTGAACAACTTGCTCGTGACATTGCCAACCGAAGTCAGTTTTCAAAATTTTTTTTCAGTTTTCAATTTTTTT TTGGAAATTTCTGGACTCAATGATCACTACACCTGTTTTTAGCTTACCCCTTGAATAATTTCTCATTTTTATTTTGTGGG TATGTTTAAAGTTTCAAACTTTCAATCTTTTGTTGAATTTTTGGGTTGTGGGGGGAACTATGTTTAGCTTAGCCCTTGAA TGATTTATCAATTTTATTATGTGGGTATGTTTAAAGTTTCAATTTTTGTTGATTTTTGGGGTGGAAATTTTGTAGGCATA CTTGTGAAGGGAATGTATGAGCTGTGGGGGGAAGGGGGTAGCTATGAGGAGCTGAGAGAATCTGTGTTGAGTTACCTAGA TGAGGGGAAGTTGCAGTACTTGGAATCTGATAGCACTTTCAGGGTTACTGTTGACAGCTTTGGGAAGGCCATGAGCCTCA ATGAGCAAAAGGAACTCATTCAAGGGCTTTCTTATATCCCTTTCAAGGTAGGGTATCCTATCCCTTAATCTGTTGGATCT CTGAATTGAGGATGATGATCATGAGCAGATAATCACCTTAGTCATGTATTAATTATCTTTGGTTGGGCCCTATAGATTTG GAAAATATTGTGCAGGGGTTTATACGCGAGCTTATATTTACGCGGGGTTTATCACTGCTATAAATTTTTAAAATGCAATT TGAATCATCGCTATTCACTTCCATTTCATAGGAGGTGATATTGTCTTGTCTAGGCTGGGGATGATGCAAGCTCTACTTTA GTTTTTGTCAAAAGTTTCTGGATTTCTGCTTTTTACCTCTTGGTTTACTGAATCTATGGTTTTTTTAATATCAACCAGAT TTCCAAACATATGGACCAGGATTTTTTCTGAGTTGGATTTCATCAAGCTTTTTGATGTTTCTTCTTTATGGAGCATTATT TTTCTTTTTTTCCTATGTTGTTTTGTCCTCGCCCATTTGTTTTCATTTGATCTGGAAATAGGTCCATTTTCATTTTATGA AGTCAGATGCGTTACAGTGAATGTAATTCCTCATAATTTATTACAGTTCTTCTAAGATAAAGTCAGATCAGTCAATAATG TGTTCCTTATCCATCATTGTATGGTCACTTTGCAGGGAAAGGTAAATTTGAGAAATCCAGATCACAACTTCTGGCTCATA GTAATTGATAATCATGGAATTAATAATGGTCTTCCTCCTATTGACCACAAAAGACTCTTCTTTGGTCGTGAAATTGGTGG TTCTGATAGGAAGCTTATACCCACATATCAGTTGAAAAGCCGTAATTATCTTGGGCCAACAGCCATGGATGCTGAAATGG CTTTTCTAATGGCCAACCAAGCACTAGCAACTTCTGGGAAACTAGTTTTCGATCCTTTTGTTGGAACTGGAAGTATTCTA GTCGCAGCAGCTCATTTTGGAGCTATGACCATGGTCTGCTTCTCCCTCTTTCTTCTTCTTCTTCTTCTGGGTGATTTTTT TCTTTTAAACTTATCCTGCTTTTACCTTTACTATTTTGATATCTTCTGGGAAAGTTCATGTCAAAATGCATGCAGAAGAT TTTCTTAACTTCTCTTTAACTAGAACCGATCTTAATTGTTCAGGGTGCTGACATTGACATTAGGGTAGTACGCGATGGAC GTGGTCCTGACTGTAATGTTTGGAGTAATTTTAAGCAGGTAAATGCACCATACACTTACCTTTGTTTTATGATTAGTAGT ATGAAACATTGTGTTTTTATGGGTACTTGAAATTCAGCATCTCATGTTATAAATATAATAGTCTGAACATGCATGAAAAA AGCATACTTTATGATATGTATTTCATTCTGATAATATAAGGATGCACATTTTGCAGTATGGATTGCCGATGCCACTTGCT CTATTAAGGGCTGATAACAACCTTCCTCCATGGCGTCTTGGGCTAAAAGAGGTAATTTTCCTAAGAGTACTTGTAATTAT ATTTGCAATTAATTTTGTCCAATCTGTAAAAGGAACATTGCTTGTTGTATATCTCGACTCTCAAGTTTGGAATTTTATTA ATATCAGCAATTTTGCTGCTGTTTTTTTTTTTTTTCCTTTTATTTATCTAAAAAAAGTATCAGATATGTTTAGCATGTTT TGTGCTTTACTACCATTTTGTAATTGTGTTGCTGACTCTAGGTTTCTATTATTTCACTAATTACTAAATTGTGGGGGGTT AGATTTCCATTGTTGACTCTGGCTCATTGTAAGCCAGCTGTTTGGGGCTTAGTATTTGAGTGTTGAATTCTGTTTAAAGT GATTGCTTAACAACAATCAAGCATTGTGTTCTTATCCCACTAGGTGGAAAACATGTAAGGTCCACTATACCTTGAGATTA GAATGCAATCTACCAAATCCTTGTTGTTTCTAGTTTTCTATTACTTGATAATGCGGGTAGTGTCTTTGGATTTAATGTCA GGTACTCTTCCAAGGATTTGAGTGGAAAGGACACTAGTGTGAAGTTAATAAGAGTGGTATCTGGATTAAACTCAATTGGG AATTATGAATTTATAAAAACATTAGTTTTCTGGGGAATTTTGCCATCAGTTGCTGGATTTGGGGAAATAACTAGAAGCAT TATTCCTAACTTCGTTTATAAGAAAAGTTCAAAAAAAAAAAAACTTTGTTTATAAGAAAAGAGTACAGCATTAAGTTTTG CATGGACGCATTTATTCATTGGTTTTGAACTTTTTTTAACTTGTTGATAATCTTGCTGTTTTTAAGGTATTTGATGCCAT TATATGTGACCCTCCTTATGGAGTGCGAGCTGGTGGACGCAAATCTGGTGGTCGGAAGCTGCTAAAGGGGATTGTGGAAC CTTACACTGTTCCTGATGATAAAAGAGCAGATCACATACCATCAACTGCAGCCTACAGTTTAGTTGAGTGTGTGCATGAT TTGTTTGATCTTGCTGCCAGGATGCTTGTTATGGGGGGCAGGCTTGTGTTTTTCTATCCTGTATTGCGAGATGACGATTT CTCGGAAATCCATTTCCCAGAGCATCCATGTTTTAAACTTATTTGTTCTTCGGAGCAGATCCTTAGTTCACGTTATAGCA GAGTGTTACTGACAATGGTCAAGATAGGTCCTTACACAGAGGAAATACAAGAGGAAGCTAGGATAAAACACATTGAATTT AGGGAGAACCATGTGAAGTGGTTAGAAGATGGTAATCTTCATTCTGGAGTTTTCAGTCCAGCTGATGATCAGTTATCTGA GACTGGTGATTTTAAGTCAATTAAAGATCAAAAGCCTAAATACAGAGGAAAATACGTTTAGACTTCATGGGTTTGATGAC CCTGCCCTAACCATTACAATAGACAGCTCTGTATTTTTATCTATCCTAGAGGAGAACCTGTTTTACTATAGGGAAGTCAG TGTATCCGTACTCTTTTTATTCAATTTAGTGATTATTTTCTGATATTTTCATCTCATTTCATAGATATTTCTTTTCTTAC CCTTTATTCTATTTCATGAGATTGATAGTTGATAAATTCCTGCTTAGATCTTCCCTGAGGTTTGACCTCAGTTAAAGCTC ATTAATTTTTTAACATGCCTTCCTTGAAGTTTTGGAGTGATTATGGTGGATGAGTTAGATTTAGAAGGAGAAAACAATAT CCTCAGGAAAGAAGATGAGTCAATTTCTTCTTGTAAATTTATTTGTTGCAGAGAAAATTGAAATGGGGTTATAAAACAAT AAATTCAAGACCGGAATCTAGAACAAATTGTGATGTAAGGTGGGGGCTTAAGAATGTGTAGAAAGTTGGTAGTGCATGAA TTTATGGAGAACATAATCACAGTTTACCTCTTCAAGGAATTTACTTATACCATATTGTATTGAAATCAAAACCTGTGTTA CATCATAGTACAATCACTGCCTTTACAAACTTAAAACAAAGAGTATACCGGTACTATTTTAGGTGTTCTTTACAACTTGA TTTTACAACTTCAAAAAGACTCAAAGTGGATGGTGAATGGAGCAGCAACTTCAGTATATGATGGTGAATGGAGCAGTAAA TGTGTTTGAATCTTGCCTCAAGTGGCTCATTGAATAGCAAGCTAAAGCCCCATTAACATTAACAATATGTGAAGACAGCA ACCGAGAGTGAAGCAAACCACTCGGCCATCTCTCCTACATAATGATTATGATCCAGAAACCTGGTGAATATGTCATTCAT ATTCTATTTGGGTGGGCGCACACGGTCAATTGAAACTAAAAAGTTAAAAAACCTCTTTTGAGGCCGGCCCGGGATAAACA AATTTGAATGGATTGTTACCCATGCTTGTGGGATTATTTTCTCACACGAGAAAAAAAAAAGTAAATAATTATAGAATGGA TTGCTACCCATGCTTAGATCTTGGATAAATGGAAATTTTATTGATAAGACCTTTTCAGTTGTATTCAATATCTTATTACA AATAATACCCACAACCTCGGGAGAAAAAGAGGCATTCACTTATTATAGAGATGGTGTGATTTGATTATCTTCTTTTTCTT TACTGATATCACAATCTTAGTAGAAAGACTCATTCTTCGGAAAGGAAAAAGAAAAAAAAAACTACGCTTGCTGAAGATGA AGTGTGTAAACATAGCTCATAATCATCATGCTAAACTGCTAAAGCCCCTTAGTGTAGCAACAAAGACTTATAGGTTAATA AACTCCAAGGCTGGATATCATTGTGTAGAATTGCATATAATATCTTTCTCATCCAATTGCTTTGGTTCGGTTTGGTTCGT CGGTTTCATCTGATCGATCCGATCCGATGAACACCCCTACTTTTCCATGCACTCTTGTAGGAGGGGTAAGCTGGAAAAGA TTGCTAATTGCTAAAGTAATGGTTGGTTCTGTAACAACTTGTGAGTGCTTAAGGACTTATTCTGATGTGTGCGTTGGACT TGTCATGTTCAAAGGAAAATGAGAGCTGAAGCATCCGTGGGACTATCCAAAGACACTACCCGCATTATCAAGTAATAGAA AACTAGAAACAACAAGGATTTGAGTGGAAAGGACACTAGTGTGAAGTTAATAAGAGTGGTATCTGGATTAAACTCAATTG GGAATTATGAATTTATAAAAACATTAGTTTTCTGGGGAATTTTGCCATCAGTTGCTGGATTTGGGGAAATAACTAGAAGC ATTATTCCTAACTTCGTTTATAAGAAAAGTTCAAAAAAAAAAAAACTTTGTTTATAAGAAAAGAGTACAGCATTAAGTTT TGCATGGACGCATTTATTCATTGGTTTTGAACTTTTTTTAACTTGTTGATAATCTTGCTGTTTTTAAGGTATTTGATGCC ATTATATGTGACCCTCCTTATGGAGTGCGAGCTGGTGGACGCAAATCTGGTGGTCGGAAGCTGCTAAAGGGGATTGTGGA ACCTTACACTGTTCCTGATGATAAAAGAGCAGATCACATACCATCAACTGCAGCCTACAGTTTAGTTGAGTGTGTGCATG ATTTGTTTGATCTTGCTGCCAGGATGCTTGTTATGGGGGGCAGGCTTGTGTTTTTCTATCCTGTATTGCGAGATGACGAT TTCTCGGAAATCCATTTCCCAGAGCATCCATGTTTTAAACTTATTTGTTCTTCGGAGCAGATCCTTAGTTCACGTTATAG CAGAGTGTTACTGACAATGGTCAAGATAGGTCCTTACACAGAGGAAATACAAGAGGAAGCTTGGATAAAACACATTGAAT TTAGGGAGAACCATGTGAAGTGGTTAGAAGATGGTAATCTTCATTCTGGAGTTTTCAGTCCAGCTGATGATCAGTTATCT GAGACTGGTGATTTTAAGTCAATTAAAGATCAAAAGCCTAAATACAGAGGAAAATACGTTTAGACTTCATGGGTTTGATG ACCCTGCCCTAACCATTACAATAGACAGCTCTGTATTTTTATCTATCCTAGAGGAGAACCTGTTTTACTATAGGGAAGTC AGTGTATCCGTACTCTTTTTATTCAATTTAGTGATTATTTTCTGATATTTTCATCTCATTTCATAGATATTTCTTTTCTT ACCCTTTATTCTATTTCATGAGATTGATAGTTGATAAATTCCTGCTTAGATCTTCCCTGAGGTTTGACCTCAGTTAAAGC TCATTAATTTTTTAACATGCCTTCCTTGAAGTTTTGGAGTGATTATGGTGGATGAGTTAGATTTAGAAGGAGAAAACAAT ATCC
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0032100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTGGTACTTGTGCGTTTTCTTCCACAGATTGTTGGATTACCGAAAACCCGAAGTTGAATCACTCGCACAACTCTTCGG AGAAGCCAACCAAAACGACGACGACGACGTTTCATCCTCCCAGTTGCAATGGAAGCTCCCTCTTCATCACCACCCTGATT CTCCTTTCCACCTCGTCAATCTCCCTTCTGAACAACTTGCTCGTGACATTGCCAACCGAAGCATACTTGTGAAGGGAATG TATGAGCTGTGGGGGGAAGGGGGTAGCTATGAGGAGCTGAGAGAATCTGTGTTGAGTTACCTAGATGAGGGGAAGTTGCA GTACTTGGAATCTGATAGCACTTTCAGGGTTACTGTTGACAGCTTTGGGAAGGCCATGAGCCTCAATGAGCAAAAGGAAC TCATTCAAGGGCTTTCTTATATCCCTTTCAAGGGAAAGGTAAATTTGAGAAATCCAGATCACAACTTCTGGCTCATAGTA ATTGATAATCATGGAATTAATAATGGTCTTCCTCCTATTGACCACAAAAGACTCTTCTTTGGTCGTGAAATTGGTGGTTC TGATAGGAAGCTTATACCCACATATCAGTTGAAAAGCCGTAATTATCTTGGGCCAACAGCCATGGATGCTGAAATGGCTT TTCTAATGGCCAACCAAGCACTAGCAACTTCTGGGAAACTAGTTTTCGATCCTTTTGTTGGAACTGGAAGTATTCTAGTC GCAGCAGCTCATTTTGGAGCTATGACCATGGGTGCTGACATTGACATTAGGGTAGTACGCGATGGACGTGGTCCTGACTG TAATGTTTGGAGTAATTTTAAGCAGTATGGATTGCCGATGCCACTTGCTCTATTAAGGGCTGATAACAACCTTCCTCCAT GGCGTCTTGGGCTAAAAGAGGTATTTGATGCCATTATATGTGACCCTCCTTATGGAGTGCGAGCTGGTGGACGCAAATCT GGTGGTCGGAAGCTGCTAAAGGGGATTGTGGAACCTTACACTGTTCCTGATGATAAAAGAGCAGATCACATACCATCAAC TGCAGCCTACAGTTTAGTTGAGTGTGTGCATGATTTGTTTGATCTTGCTGCCAGGATGCTTGTTATGGGGGGCAGGCTTG TGTTTTTCTATCCTGTATTGCGAGATGACGATTTCTCGGAAATCCATTTCCCAGAGCATCCATGTTTTAAACTTATTTGT TCTTCGGAGCAGATCCTTAGTTCACGTTATAGCAGAGTGTTACTGACAATGGTCAAGATAGGTCCTTACACAGAGGAAAT ACAAGAGGAAGCTTGGATAAAACACATTGAATTTAGGGAGAACCATGTGAAGTGGTTAGAAGATGGTAATCTTCATTCTG GAGTTTTCAGTCCAGCTGATGATCAGTTATCTGAGACTGGTGATTTTAAGTCAATTAAAGATCAAAAGCCTAAATACAGA GGAAAATACGTTTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0032100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MWYLCVFFHRLLDYRKPEVESLAQLFGEANQNDDDDVSSSQLQWKLPLHHHPDSPFHLVNLPSEQLARDIANRSILVKGM YELWGEGGSYEELRESVLSYLDEGKLQYLESDSTFRVTVDSFGKAMSLNEQKELIQGLSYIPFKGKVNLRNPDHNFWLIV IDNHGINNGLPPIDHKRLFFGREIGGSDRKLIPTYQLKSRNYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILV AAAHFGAMTMGADIDIRVVRDGRGPDCNVWSNFKQYGLPMPLALLRADNNLPPWRLGLKEVFDAIICDPPYGVRAGGRKS GGRKLLKGIVEPYTVPDDKRADHIPSTAAYSLVECVHDLFDLAARMLVMGGRLVFFYPVLRDDDFSEIHFPEHPCFKLIC SSEQILSSRYSRVLLTMVKIGPYTEEIQEEAWIKHIEFRENHVKWLEDGNLHSGVFSPADDQLSETGDFKSIKDQKPKYR GKYV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13370:SF19
1 466 466 2.1E-232 –
PIRSF
PIRSF017259
1 474 474 1.9E-137 –
PANTHER
PTHR13370
1 466 466 2.1E-232 –
ProSiteProfiles
PS51627
8 484 477 135.08
IPR016691
Pfam
PF01170
199 324 126 1.2E-10
IPR000241
Gene3D
G3DSA:3.40.50.150
204 341 138 3.2E-23 –
SUPERFAMILY
SSF53335
211 434 224 5.49E-22
IPR029063
ProSitePatterns
PS00092
305 311 7 -
IPR002052

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of
GO:0032259
Biological process Methylation The process in which a methyl group is covalently attached to a molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0032100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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