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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0035600 |
| Transcript ID | LotjaGi4g1v0035600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Metacaspase-1; TAIR: AT1G02170.1 metacaspase 1; Swiss-Prot: sp|Q7XJE6|MCA1_ARATH Metacaspase-1; TrEMBL-Plants: tr|K7L5D3|K7L5D3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0035600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4298912..4304879) extracted from Lotus japonicus Gifu genome v1.2.
GTTTGCATGCTTGGCCTATTGGGATAAGTAAATAATGGAAGCTGCATCTAAATATAGAAGGTACAGAAAAGGTGTTTCAT CTCCCACTAGCACTACTGTTCATGGTTGCAAAGCAGAGTGTCTAGATCTATTGCCATCAAGAACAGATCAATACTGTTGT TTTTTTTGCCACAATAATGCTAGTTACTCAACTTTGGAGCATGAGAAATCAAGGGAAAATTGTGGACTAGGGTGTCCAGT GAAGAAAATTGGATCCAAATTGTTCAAACTTGGTCATCCTAACAGTTCCAACAAGAGTGGAAATTTGCTAGGAAGGCCAT CATCAACTTCTGTGGCATTTTCCTCTGTCTTGCCAACAAGATATGATAAGCGTGCGGTTCTCTGTGGAGTTTCTTACACA AAAAGGAAGTTCAGGCTCAAGGGAACCATTAATGACATAAGGAACATGAAGGAGCTGTTGGTTAAGAACTTTAAGTTTCC AAATGAGTGCATAAGAGTCCTCACAGGTATGTCTTGACAAGTATCATATGTCTTCTCTCAGTAACAAATTCAACTTATCC AATGTGCCACAAATTAATCTCATTATGAAAAATAAAATGAATTGCAGAACAAGAACATGATGCCAATTTGATACCAACAA AACACAACATATTGGAGTCCTTAAGGTGGCTTGTGAAGGAGTGTAAGCCAGGAGACTCATTGGTGTTTTACTTCTCAGGG CACGGTTTGCAGCAACCAGATTTCAAAGAAGATGAGATTGATGGGCTTGATGAGACTCTTTGTCCTGTTGATTTCATGAA AGAAGGAATGATCACTGACAATGAAATAAACTCTACCATTGTTTGGCCACTCAAGAAAGGTGTCATACTTCATGCTATTG TTGATGCTTGTCACAGTGGAACTATTCTTGACCTTTTGCATGTTTATAATTATGGAAGGTAAGTGCATTTTTATTGCTTA CATGGATTTAAGTTTTTAAGAGGTGTTGATTAGAGTTATGGCTAAATAAGATCTAATAAGTGGAAGATAAATTTTAACCC CTAAGGCTAAGCTAGCTTTTGGGCTAGAGTTTGTTTAACCTGAACTATGAGATAATATCACATTCAATCATAAACCAACT AATAAATGGGTCGTTAACAGATGTCTAGTCATGACTTTTAAAAAAATAAGATGTCTAATCATGTTTTTTTTTAATAGGCA ATAAGAAATATATTGAATAGAAGTATAAGGGGTACTTCGACCCAATACAAGAGATAGAAGAAGGAAGTAGAGAAAAAACA CAGAAAATTACAAGTACAAATACATAACCCTATAAAAGATGAAACTACCCCACCTAATACCCCATTGAAAATAAACTTAA CAAAACAAGCCTCATTAAAACCTTGCTAGGATAAAACCCCCTTGGGAAATCCTAACAAGGAAAAAGAGTACCAATTTTGA GAAGTCAAGAGGAATTTTCAAGGGTGTTTACAAAGAAAACTAATGCCCAACCCACACCCCACTGCTAAACCTTCCAAGAT CAGACCAAGCCTTCAACCAATTTATAAATCTGAATCTGTACCTCCAGGAAAAAAACCAGCACCATTTGACTTGTGAAAAA AGGAACCAGGAATCAAAGAACATTCAATGGGAACACATGAATTGGCAGCAAGCAAAAACCAATAACCTCCATCAAAAAAA ATGAGTGCAGCAGCACCATCACTAGATAACAATAACAGCCATCCATACTTCAAATATAAGCTATCATCTTAATTGAGCAA TACAAGAGCACGGGTCCAAGTTCCATTCAGACATTGAGCACCTAAAATCCCTTACCATTGATGAGGTCCAAATCCATGCC CTCCATTGAACGGTACACATGAGGCCTTCCCAATCTGGAACTTCATTTGAGAATATCAATTTATTTCGCGCGCACCAGAC AGTCCAAACCACTGCTCCCCAAATTGCCCACCACACACGTCGTGGTTTCGCATTCCAACTTCCATGAGTGTGCTGCAAAA AAATGCATTTGGCTGTCTTCAGGTAGAACCGTGCTGAAACCAAGCCATTTATAACAAGCATACCAAAGTAATGAAACTTT CCTGCAAGAAAACATCAAGTGACCAACAGATTCCACGGATTCATCACAGAAAACACAATTTAGAGTAGAATTTGAATTAG AGTTATAAAATTGTGCAAGGATTCCCCTTCTGGCTAAATTTTCTTTGGACTGGATCCTGCCCCAAAGTAGCTTCCACATA AATGCCTTTATTGAAGATGGAGTAAAGGCTTTCCACAATGAAACAAAGGCTGGGATAGGGCAAGAAGTCAAGAGATTCCT TATTATAATATATGCAGATTTGACAGAATAACCTCCACACACATCATCCTTCCATATCCACCTATCAGACACGCCCCTAC TTATTTGTAACTGCTGAATCACTGCCAGTAATTCCTCTAACCAAGTCTTCTCCCAATCTCTTAAATTTCGCCTCCATGAG AATTCCCACCGCCATTCATTATTATGCCAGTGGCCAAGTTCAGAAATCAGATTCGGTTGCTGTGCAGAAATTTGAAAGAG TCTAGGAAATTTATCAGCAAAAGGTTCCTCTCCCACCCAAACATCGAGCCAAAACCGAACACGGTTACCTTCACCAATTC GCCTTGCTGTAGCACCATCAAACCAAGCCTCTTAGTGTACCATGATGACAGTTATATTTGGTCCTAATTATACGAGCCCA CAATCATTGATGCTCCTCACAAAGCCTCCATCTCCATTTCCCAAGTAACGCTCTGTTGGAATCACCCCAATTTCTAATAC CAAGACCACCATGCATTTTCGGTTTGGTCACAATATCCCATTTTACCCACGCAACCTTGTGCTGTTCTTCATTCGAGCTA CCCCACAAGAAATTCTTCATTATCCTGTTACATTCTTTTTCCACTCCAATTGGCATTTTAAAGAAGGACAAATAGAAGAG CGGAATAGAGGACAAGGTACTATTTATCAAACAAATCCTACCTCCAAAGGATAGGGTCTTCCGCCTCCATCTAGATAATC TCTGTCGAAGTTTACTAAGGATTGGATTCCATAATTGAAGTCGTCTCGGATTTTCCCCAACCTGCAATCCCAAGTACACA AATGGAGTCTTCATCAATTTACAATTTAAAATTGCAGACAACACTTGTAGCTCTCGTTCCTCCACAGCAATCCCTATCAA GCTACTTTTAGAGAAGTTTACTTTCAGCCAATTCATAGCAGTGTAAAATGCATTTTACAGTAAAAGCATTTTCTCTCGAT GCTTCACCAATAAATAAGGTATCGTCTGCAAATTGAAGAATAGAAACCTCCTCTCCTTCCATGTTCTCAAAACCATATCC TTTAAATTTATTCATAATAACATCCTGTTTCAGCAAACCATTTAGCCCCTCAGCTATAATCAGAAAGAGAAAAGGAGCGA TCGGGTCTCCTTGCCTAATCCTTTTCTCCAAACAGAATTCTTCACTAGGACTTCCATTAATTAGGACTGAAACTCTGGCA GATTCAATGCAACCTTCCAAGAAATCCATTTATGGGCAAAGTTCATACGATCCATCATATAATACAGAAAATCCCAATGA ACAGAGTCATAGGCCTTCTCGAAGTCTACTTTAAATGCCATAGAGCTTTTTTTCCTGCATTTCGCATCATTGACCCACTC ATTTGCCACCACTACACTGTCAAGAAGTCCTCTTCCCTCTAAGAATGCACTTTGAGAATCATCAATTACTGAATTCAGCA CCTTTTTAATACGATAAGCTAGAACTTTTGAGACAACTTTGTATGCACAACCAATAAGAGAAATTGGTCTGTACTCCGAA ATATTCGCAGGATGTTCCTTCTTCGAAATTAAAGTGAAAAAAGATGAATTACAGCCCTTAGGCCACCTGCTTGTAGAGTG GAATTCATCTAAGAGGTTCTGAAAATCAGTAGAGACAAGATGCCAGAAAGTTTTGAGGAATTTGAAATTTATACCATCCG GTCCAGGGCTTTTATCGATTCCACATTCCCAGACCGCTTCCTTCACTTCTAGGGGATCGAATTTAGCAATCAGATTAACC TTATCCTCCATGGTAATTTTGCGGAACGGCACGCCATCTAATGTCAGTGCTAGCTGATCAAACTTTAATTTCTGAATTTT GATTGAAAGAATTCTTTAGCTCCATGTTTAATAGTATTAGGGTCCTCAGTCCAGCTCCCATTATGATGGATCCCCACCAA AGTGTTTGTTTGTCTCCTCCAGTTGATACAAGAATGGAAAAATTTAGAATTTAAGTCACCTTCTTTGATCCAACGACAAC GTGACTTTTGATGTAAGATAGATTCCTTGTATTTTGCTACCTGCCAGAATTCTGCTTGGATGGCCTTTATCTGATTTGAT TCTTCCTCCGACAGCCCTCCATTTTCCTTTTTTTCATCAAGCACCTCGAGTCTATCTGCAGTTTCCTTATATTTTCGGTT CACATCACCGAAAATTTCTTTATTCCAAGTCTTCAACCTGATTTTGATCCCTTTCAGTTTTTCTTTTAGCACAAAACCAC TTGAACCAGTAGTTACTGAAAGTTGCTCCCACTCTTTTGAAACAAACTCCTTAAATCTTGGATCAGAAAACCAACAATTT AAAATTTTCATGTAACCATCACGCTCGATATGTCTCATCATATGACATAAGAAATGTGTGCTAGTAGATATCGCATTTAC GATGACCAAATAAAATTAAGGAAGGGTACTCCTCACCTCTGAACTAGCTTTTGAGTTAAGAGTTTGACTTGAGTTATAAG AAAAGCTTATATTAGCATTCCCTAATTCATGTTAAAACTTCATCGTGAAAGTTTTGTATTAATGTGTATACAAATTTTAA TAAGACCCACTCCTATTTTCTGTCTATTTAGACACAATTTTCACATCACAATTTGTTTTGGATGCTTGCAGAGGAATTTG GGAGGATAACAAGCCCCCTTCTAAAGAACCTATTAGAAAACATACAAGTGGTGGATTGGCCATTTGTTTGAGTGCTTGTG AAGATAGCCAGACAGCTGCTGATAGCACAGTAAGAATCTTAGATGTGTTCATATTTGACAATGCAATGTAGTTCAATATT AATGTAGATACTTACCACAGGGTTTTTGACCTTTGAACCAACCTATGTAGGTTTTTGGTGGAAAGGGAATGAATGGTGTT CTGACTTATCTTTTCACAAAAACAATCAGAGAATGCCCTGAAATAACTTATGGGCGTCTACTAGAAAAGATTCATGATGA AATGAAAAAGATTAACCAGAGAAGATGCCATAACCGCATCTTGCAACATATCTTCCATTGTAAAATTGCACAGGTTGGGT TTAATCACATTTTATTATCACTTATTTCCAAGTAAGGGTTGTCTAAATGACCCATGATAAATATCACATAATAGCATTAT TACCTTTAATGACGATTATTGTAGATGTCCTCACCCAATTTTTCAGTACATGACAATATTCAACGTGGCATAATTATTCA TGATGAAGCTGAATACATAATATATTGCAGGATCCTCTTTTATCATCATCTGAGAAATTTGATGTGTCTGCGACAATATT CAAATTGTGAGTGTGTAAGTTGGAAAAGAAGGACAATCTGTCGTCTGTTAAGGATTTATTGCAAGGCCTTCAATAGTGTA TCTCCGGTTGCTATATATTCTGATAACTTGGTAGTGGACAGAAGAGAACTTGTGCTATTGCCTTTTGAAAAAAGGTCAAA TATATTTTTTGGTCCCTTTAATTGTGAGGCCGAACTTAGTCCATAACCAGTTGTATGTGGGTCCTTGAGATTTTTGAATT ATTTTATTTTAGTACTCACTAGAGGCAGACGAGTCTACGTGTCCGAATCTACGTGTCTGATGAAACCTTATATGGCACTA AACTAATCAATCAATAGGATAATTGGCATCCACAAGTATGTTTAAGTA
CDS sequence (LotjaGi4g1v0035600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCTGCATCTAAATATAGAAGGTACAGAAAAGGTGTTTCATCTCCCACTAGCACTACTGTTCATGGTTGCAAAGC AGAGTGTCTAGATCTATTGCCATCAAGAACAGATCAATACTGTTGTTTTTTTTGCCACAATAATGCTAGTTACTCAACTT TGGAGCATGAGAAATCAAGGGAAAATTGTGGACTAGGGTGTCCAGTGAAGAAAATTGGATCCAAATTGTTCAAACTTGGT CATCCTAACAGTTCCAACAAGAGTGGAAATTTGCTAGGAAGGCCATCATCAACTTCTGTGGCATTTTCCTCTGTCTTGCC AACAAGATATGATAAGCGTGCGGTTCTCTGTGGAGTTTCTTACACAAAAAGGAAGTTCAGGCTCAAGGGAACCATTAATG ACATAAGGAACATGAAGGAGCTGTTGGTTAAGAACTTTAAGTTTCCAAATGAGTGCATAAGAGTCCTCACAGAACAAGAA CATGATGCCAATTTGATACCAACAAAACACAACATATTGGAGTCCTTAAGGTGGCTTGTGAAGGAGTGTAAGCCAGGAGA CTCATTGGTGTTTTACTTCTCAGGGCACGGTTTGCAGCAACCAGATTTCAAAGAAGATGAGATTGATGGGCTTGATGAGA CTCTTTGTCCTGTTGATTTCATGAAAGAAGGAATGATCACTGACAATGAAATAAACTCTACCATTGTTTGGCCACTCAAG AAAGGTGTCATACTTCATGCTATTGTTGATGCTTGTCACAGTGGAACTATTCTTGACCTTTTGCATGTTTATAATTATGG AAGAGGAATTTGGGAGGATAACAAGCCCCCTTCTAAAGAACCTATTAGAAAACATACAAGTGGTGGATTGGCCATTTGTT TGAGTGCTTGTGAAGATAGCCAGACAGCTGCTGATAGCACAGTTTTTGGTGGAAAGGGAATGAATGGTGTTCTGACTTAT CTTTTCACAAAAACAATCAGAGAATGCCCTGAAATAACTTATGGGCGTCTACTAGAAAAGATTCATGATGAAATGAAAAA GATTAACCAGAGAAGATGCCATAACCGCATCTTGCAACATATCTTCCATTGTAAAATTGCACAGGATCCTCTTTTATCAT CATCTGAGAAATTTGATGTGTCTGCGACAATATTCAAATTGTGA
Protein sequence (LotjaGi4g1v0035600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAASKYRRYRKGVSSPTSTTVHGCKAECLDLLPSRTDQYCCFFCHNNASYSTLEHEKSRENCGLGCPVKKIGSKLFKLG HPNSSNKSGNLLGRPSSTSVAFSSVLPTRYDKRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQE HDANLIPTKHNILESLRWLVKECKPGDSLVFYFSGHGLQQPDFKEDEIDGLDETLCPVDFMKEGMITDNEINSTIVWPLK KGVILHAIVDACHSGTILDLLHVYNYGRGIWEDNKPPSKEPIRKHTSGGLAICLSACEDSQTAADSTVFGGKGMNGVLTY LFTKTIRECPEITYGRLLEKIHDEMKKINQRRCHNRILQHIFHCKIAQDPLLSSSEKFDVSATIFKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 23 | 386 | 364 | 3.7E-148 | – | |
| PANTHER | 23 | 386 | 364 | 3.7E-148 | – | |
| Gene3D | 75 | 387 | 313 | 1.4E-93 | – | |
| Pfam | 112 | 374 | 263 | 5.2E-44 | – | |
| SUPERFAMILY | 115 | 349 | 235 | 5.49E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0035600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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