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IPR029030

Description

IPR029030 is a Caspase-like domain superfamily.

<p>This superfamily represents the caspase-like domain found in caspases, metacaspases and peptidases of the C25 family (gingipains).</p> <p>Caspases (Cysteine-dependent ASPartyl-specific proteASE) are cysteine peptidases [[cite:PUB00011704]]. They are tightly regulated proteins that require zymogen activation to become active, and once active can be regulated by caspase inhibitors. Caspases are mainly involved in mediating cell death (apoptosis) [[cite:PUB00015006], [cite:PUB00015008], [cite:PUB00014747]]. They have two main roles within the apoptosis cascade: as initiators that trigger the cell death process, and as effectors of the process itself. Caspases can have roles other than in apoptosis, such as caspase-1 (interleukin-1 beta convertase) ([ec:3.4.22.36]), which is involved in the inflammatory process. The activation of apoptosis can sometimes lead to caspase-1 activation, providing a link between apoptosis and inflammation, such as during the targeting of infected cells. Caspases may also be involved in cell differentiation [[cite:PUB00014748]].</p> <p>Metacaspases are arginine/lysine-specific, in contrast to caspases, which are aspartate-specific. They are found only in plants [[cite:PUB00066783], [cite:PUB00066782]], fungi [[cite:PUB00066784]] and lower eukaryotes, including the protozoa [[cite:PUB00066785]]. While plant metacaspases have been shown to be involved in cell death pathways, in other organisms they have evolved alternative functions [[cite:PUB00066787]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 29

Transcript Name Description Predicted domains Domain count
PREDICTED: metacaspase-1-like [Solanum lycopersicum] gi|460371036|ref|XP_004231352.1| 5
PREDICTED: metacaspase-9-like [Cicer arietinum] gi|502107496|ref|XP_004493282.1| 5
CM0216.410.nc [Lotus japonicus] gi|164564742|dbj|BAF98223.1| 5
CM0216.410.nc [Lotus japonicus] gi|164564742|dbj|BAF98223.1| 5
CM0216.400.nc [Lotus japonicus] gi|164564741|dbj|BAF98222.1| 5
PREDICTED: metacaspase-4-like [Glycine max] gi|356526409|ref|XP_003531810.1| 5
CM0216.400.nc [Lotus japonicus] gi|164564741|dbj|BAF98222.1| 12
Peptidase C14 [Fibrisoma limi] gi|496582894|ref|WP_009282733.1| 4
PREDICTED: metacaspase-1-like [Glycine max] gi|356495863|ref|XP_003516790.1| 11
PREDICTED: metacaspase-1-like [Cicer arietinum] gi|502103244|ref|XP_004492236.1| 10
Peptidase C14, caspase catalytic subunit p20 [Medicago truncatula] gi|87162873|gb|ABD28668.1| 5
PREDICTED: metacaspase-9-like [Cicer arietinum] gi|502107496|ref|XP_004493282.1| 7
Dihydroxyacetone kinase family protein [Arabidopsis lyrata subsp]. lyrata] gi|297834694|ref|XP_002885229.1| 16
PREDICTED: metacaspase-4-like [Cicer arietinum] gi|502155232|ref|XP_004510001.1| 6
CM0216.410.nc [Lotus japonicus] gi|164564742|dbj|BAF98223.1| 5
Metacaspase 7 [Arabidopsis thaliana] gi|42563346|ref|NP_178049.2| 3
PREDICTED: metacaspase-3-like isoform X1 [Cicer arietinum] gi|502142133|ref|XP_004504807.1| 7
PREDICTED: metacaspase-1-like [Cicer arietinum] gi|502142131|ref|XP_004504806.1| 7
Disrupted meiotic cDNA 1 [Pseudoroegneria stipifolia] gi|281704340|gb|ADA77115.1| 15
PREDICTED: metacaspase-1-like [Cucumis sativus] gi|449432362|ref|XP_004133968.1| 6
Metacaspase 9, partial [Capsicum annuum] gi|472271622|gb|AGI37355.1| 4
CM0216.400.nc [Lotus japonicus] gi|164564741|dbj|BAF98222.1| 5
Metacaspase-1 [Medicago truncatula] gi|357445871|ref|XP_003593213.1| 3
PREDICTED: metacaspase-4-like [Glycine max] gi|356526409|ref|XP_003531810.1| 5
CM0216.400.nc [Lotus japonicus] gi|164564741|dbj|BAF98222.1| 5
Metacaspase-1 [Medicago truncatula] gi|357445869|ref|XP_003593212.1| 5
PREDICTED: metacaspase-1-like [Cicer arietinum] gi|502077234|ref|XP_004485589.1| 5
Metacaspase; TAIR: AT1G79340.1 metacaspase 4; Swiss-Prot: sp|O64517|MCA4_ARATH Metacaspase-4; TrEMBL-Plants: tr|A0A072U0M2|A0A072U0M2_MEDTR ICE-like protease (Caspase) p20 domain protein; Found in the gene: LotjaGi3g1v0034100 7
Metacaspase-1; TAIR: AT1G02170.1 metacaspase 1; Swiss-Prot: sp|Q7XJE6|MCA1_ARATH Metacaspase-1; TrEMBL-Plants: tr|K7L5D3|K7L5D3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0035600 7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 3.45