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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0042200 |
| Transcript ID | LotjaGi4g1v0042200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphoglycerate mutase family protein; TAIR: AT5G64460.1 Phosphoglycerate mutase family protein; Swiss-Prot: sp|Q9FGF0|PGML1_ARATH Phosphoglycerate mutase-like protein 1; TrEMBL-Plants: tr|I3SKZ4|I3SKZ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0042200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4978170..4984653) extracted from Lotus japonicus Gifu genome v1.2.
GTTGATGCAAAATATCAATAAATCCAAGCAACAAGTTGACAAGACGGTACTGGTTCTCGCTGATTCCCAATCGCTGCTCC TAGTTAAAAGGAAGGAAGGAGCGAACGAACAAGATTATACTACAATACAGCGCCTTCACCACAACCACTCCTGTTCCTTC TTCCTCTCTCTCTCTCGATCTGTGTTGTGTTGACTGACTATGGATTCCGGCGCTGCTGCAGTTCCCTGTTTGTTCCCGTT GCATCGCTGCAAAACCATTCACCTGGTTGGTAATACTCAACACATTCATCATTTCATCAAACATTTCAGTTTCATTTCAC TCCGTGTGTTGCGTGTTAGAGTCCCACATTGGCTAGAGACTTGACCAATCAAGTGCTTATAAATGGTAACTCTTAGGCTA GCTTTCGAGTTGAGTTAGGTCTCCCTAATTCTAATATTCGGTTCAGGTGAGGCACGCGCAGGGGATCCACAATGTGGAGG GAGATAAGAACTACAAAGCCTACTTGAATCCTCAATACTTCGATGCTCATCTCACTCCATTGGGATGGCAACAGGTAAAC ACTTTCACTCTTCACACAACCTTCAATCAAATACATCGTTGATTGTTTCATTGGTCTCTTACTATCAGGTTGACAATTTG CGAGACCATGTTCGTGCTTCTGGCCTTATAAACAAGATTGATCTTGTTATTGCATCTCCTTTATTGAGGTATCTATCAAC AACACTGCCTTTAATCTCTCAAATGCCCTTTTGTTTTTGGATTAATATAACCCATGAAAAGTAGTACATGTGTTTAGTTT TTCTTTTACTTTGGTTGTATATTAATGTTACTTGGATTAGTTTTGTGTGAAGTAATTAAGTGATTGAGTTAGCATAAGTG TTTTTGCTTAATGTGTTTCTGCTATTGCTGTTGCAATTATCCTAGTTAATTGACAGCTTGTCTGTTACCATAGTTAGATA GTTAGAACTCTAGTAAGTTAATCTTAATTAAGTTTATGATAGTTAGATAGCAGTTATCATTCAGCTATTATATTCTAACA ATCTAACTATAATAAACTCTTGAGTTGTCAATTAACTAGGCTAATTACAATAACAGTATGAGAAACACACTAGCAGCAGC AGAAACATTTATACTAACTCAATCACTTATCTTCACATGTTGCTTAATTAATAAAAGTCTGCTTGCTCTGATGATTATAT TCCCGCAGTGTATTTCTGGCCTTACAAGGCTGCATTGGTTGGAAAACCCAATTGTTCTGGAAAGTTGATTTTTTTGTATG TACTGTGAAAGTTAGCTGGGAATTGAAATGGATGATCAACCGGCTTGGTGGATGCATCCACAGATCTTGACATATTTAAT AATGCAATATATCTTTTGGGACAGATTAAAAGATCATAGAAACATAATGGAGCTTAGTAAATAAGCTTGTGACTTTACCT AAGCTAGATTTGGTATGAATGTATTTCCAGTGTATTATCATATAGTGTTTAGTTAATATACAATTTGGTCCCAAAAAATG GAAACTTGTGTTATTTTGGTCCATTAAAGTGCATGTTTATACAAATTGGTTCCTGAAAGTGACAACTTTATAACAAGTCA TTTAGTGGTAGTGAGACATAATGGAAACACTGATGTGGAAACTGGAAACACACGTGTAATATTACATCACAACTAGATTG CTTACTTGGAATCTTTAAGTATCATTACTTGTACAATGGGAAAGACTGAAGCGTTCCCACCCGTTCTGTCCCAATGAACA TCTCTGATTTGTGTAATTTCTCAAGTCTCTTTATCCAAAGTGACGATTGTGTTTGAGTATTTCATGTTAGAAACTAAGTT GGGAAATAATGTTAGATGTGTTATGTGTATACTTAATTTCTCTTATCCTAGCTTTTTCATTTTGTCTCTCACTAACACCA GTTGACAAAGTAATTCTCTTGTTGTTGAGTTGTCACTTTTGGAGATTAATTTGTGAAGATATGCACATTTAGAGATCAAA CCAACATAGACTGCCACTTACAGGGACCAATTTGTATACTAACTCTTTTGTTTTTTTTTTCACTCATGAATTAATATGGG ATCCTAGAGGTACTTAAGATACTTGGGAAAATTAATTTTTTTTAACTGTTTTGAGGCAATAGACAGCAGCCTTTAATTTA TATGGTACAACTTCTGTAGGACGCTACAAACAGCTGTTGGGGTATTTGGTGGTGAGGGCTATACCGGCAAGATGGATGTA CTCCCTCTTATGGTGGCAAATGCAGGAAATAGCAGTCGCGGTGCAATTTCAAGTCTAAATTGCCCACCAATTGTTGCTGT TGAACTTTGTCGTGAACATTTGGTACGCAGCTTTACATTCTGAACATCTTTTCACTGGTTCCAAGAGATAGTGTACATCA TGCTGCTATGCCTATATGTTCTGAGTTCAATCACTATCGCAGCATATCAGTTGTTTGCAGTCATACAATTTTTTCAACCA TCAAAATAATGGCTGCAAACGCATCATTAATTTGGGGGGGGGGGTCAGAGTTTTTATTTAAAAATTAATAGATAACGAGT TTTTTTTGTTGGGAATACAGGAGGGAGCAAGAACAGTTTGTATAAATGTAGATCTACTTGTCAGGATGACTAGTTACATT CCTTCCCAATTCTCCCTTTCTTTATTTTTTGTATTCTCACTTAAATTTGACTTACACTTGGGTTTGCAAAGTTAATTAGG TTATGATATTAGTTACTGTGTAAAATGGCCCAGCTGTTGCCATAGTAGGTTGGACTTCAGAGACAACGAACAAATACAGA CAAGAACCTCAAGGGTGTTTTGGGTGTGTGACTGAGTGTGTGTAGGATATACCTTCAAGGTATATTATATGGCAATGCAT CTTATAATTAAACAAGAAACTGTATGTGATGTTCATCTTATTGTTTGATGTTAAATAAACAATGTAATAGTTTAGATGCA TTTTTCATGGAAACCTTGAAATTAATGGCATCATTGCTAAACCTATGGATATGGGAGAGTATATTTCAAAGGAATATGTA AACATAAATAATTAAGTAATTAAATCATAAGGAACTGTATGATGGTGTGAATAGCAGTTATTGAGCAACATCTTACAATC TTTACAGCTGACTGAATGCTTGCGGCCTAAAAACGCTGATTAAGAAAATCACAAACTAAATTTAAATTTTGGATGGGTAA AAGTTAGTAATAAAAGCAACAAAAAAAAAATTGCTGTCAATTCATGCATTTGCTGCTTAGTCATTTACAAATCAGAAGTT TATCTTTTATGAGCAAAGGCAGTTTTATTTGCACATTTTTTTATTTCTTAAGCTTGATATTAACAGACATATGGAATATG GACCTTAAAAATTTCCCCATCTTTTTCCTCATGTAGGGAGTTCATCCCTGTGACAGAAGAAGAAGCGTTAGCGAGTACCA GTTTCTTTTTCCTGCTGTTGATTTTTCACTGGCAAGTGCCTTAATGCTTTTGCTTTATGCTTTTATAGAAGATAGCTGAT TCTTTTCTTAAGCTGGACAAAGGTTAGCCAAAATTTAATTGGTTTTCTTTGGGTTTGTATTAGTTTCTTCAAGTTTTCAT TTCAGATAGAGAGTGATGAAGATGTTTGGTGGGAGGCTGATGTTAGAGAGACAAAGGAAGAACTTGCAGCTAGGGGACAG AAGTTCATGAACTGGTATGTTTGTTACCATCAGAAGCCTCTAATGGTGTTCTTTTATGAATTGTTACCTCGGTAATACTA TCTGTGGGAAACACATTAAAGTGGAACTTCAATGTATTATGTAAGTTTGAGGCAATAGGTTTGCTATATGCGGCTCTTTG CAATATGAACTTATGTTTTGATTCTTTACTGCTTCTCTTGTGGTATTTATAAGTGACTTTTGACTAATTCACACAAATTC AGAAATTTGGTTATAGTTAATGTCTCAATATTATAAGAAAGTTATCTAAACTTTCAATAATTACCCTTATGTAAAATTTA TTCAATTTGTTAATTTCCATGTCTACCTTAGTCATCTTTTTCTATATCTCATCAGCTTCAAACTCCACCTTAATTATTTC TTTCAATTCCCATTGATTTATTTTGAACAAGAATGACTTCAACATAGTAACATACTACAGTAAATATTGGTATAGCCGAC ACTAATTAAAAAGTGGATATTTTTTGGAAAGTGTTGATTAATTAAACACAATTTATTAATGGGTAAATATAGAAAAAGTT ATTTAATGTTTCACAATTTTCTAAAGTGACTTATATAAAGGGACAAGAAAAACTTCTAAATGACTTAGGACTAGATAGAG TAGCTAACTTCCTGCATTGAGCATAGATACGGATAAAGAAGAGCTTGCAAAGGGTAGGTAAATTCTCACCCCTAACCCTA ATCTACTTGTTTTATGGCTCTATTACAATTATTAGAACTGATACATTGGTATTAGTCCAGATATCCAGTTATTATCTGTG GTTGAAGATTTGTATAATCCTCGTTACAGAGAAAATAAGTATCCACTTTCATTTTCTGCTAAATGTTATATAATTCCAAT CTGATGCCCCCTTTTTACTGTTAACTTCATCACAGGTTATGGACACGAAAAGAGAAGGAGATAGCTATTGTGACACACAG TGGATTCTTGTCTCATACTCTAAATGCTATTACAAATGATTGCCCCTTGATGAAGAAAGAAATATCCAAGCAGTAAGTGC ACAATACCCCATGCCTGACCTAGTTATTTATGATTTGCTTTGAGTTTAGTTGAATATACACAATTTTTTTGGGTAAATGT CTTGCTGTTTCTTTCTTGAAATGCATTTTACAATTTATTCCTGATGTCTGCATTTATGAAAAAAGATGTTACTAGCTTTG TTATTAGTCTTAGATATGTCGAAGGCGAGTGCCATATTTTGCACTTGTTATGTGAAGCATGTATTGCTCTTATGTAGCAG TACCAGGTTTCATGTGATGCTTTAGATTCTGTAACTTGGGATCAAGTTCCTGCAACTCTTAAACATCATGACAAATCTAG CTGATACTATGAGGAAGCTATTCGCCAATTTTTTTCTTTAATATTGAAGCAAATGATTGGCTCATTTCACATTTTCACTT CTCCTTGCAGCTTCGCCAATTGTGAGCTTCGCTCCATGGTCATTGTGGATAGGGGGTGAGTTTGCAAATACAACCTATAC ATATGAACTTCTTTGTTTAGTTTTTACAGGGATTTGTTTAACTCTTGTTCCTTCTCCAGTATGATCGGGTCGGAAACATC AACCACTAACTATCCAGGCAAGATACCTTCAGGACCGGACCTCCCTAGCGAAGTTGCGGATGAGAACGCTGAGAAATAGG GGGTTTGGTTTTTCTACTTGTATGTGTTTAGTACCATTCAAACATTGAATTACTGGACATATCATTGCTATTCCAATATC TGACTCGTATAAAATCTTCACATGATTGTTTCAGATTTTACAAATTCTGCTGATTCTATCTTGAAAGTTAAAACCTAACA ATTGGTCTGCAGAATTTTTTTTGTTTAGGTGCTCCTAGTGTGGTAATAAAGCCACACAACTTTCTTTGGTTATGGAAAAG TTCGTTAAGGATATATGTTGCTTCACGGATTTGGATTCCCTACTATTGACTGCACTACAATCACAAATGCAGACAGTCCG ATCTTAACCGAACAAATCACTTTTTAAACTAATGCTCTACCTTTAAATATGAGCCATTGAATTTGATCGAATTAACAGAG AACCCCTGACTGCAGCGAATGCAAGGACATCTGACTATAGGGAATTCAGATCCGTTGCCCTGACTGCAGCGAATGCAAGG ACATCTGACTATAGGGAATTCAGATCCGTTGCTTCGCTCGTGTCACAAACACATTGTTTAACCAAGTTTTTTTTTGGCAC GTCGCTGCCACTTATATTTTTTCTTGGTCATAAATATAGTCACTTTTTTGTTTAAATTGAAAAAAAAAACTTTTTTGTGC GTGTCATCCTTGGTCATAATCTTCTCACAAATTTCAAAAGAGTTGTTTTTCTTTTTTTGTGTTTGACGGATGTCACCACC TGCTCTGGAAATAATTGCATATGCCTCTCAAGTCCTAACAAGTGTGTTTTCCAGGATTTAAACTTGTGCTCTATCATTCT TAGCAGGAGAATTTAGTTTGCTTACTATTAGACTAACATCTATTAAACTCAATGGAGTATTGGTACATCGGTAAAATACT AAAATGGCCAATGCTTATTGATGATTTCAGCTAATAGGAGTAATAACACATGCTAAAATTCGTATTTTCGCTTTCATTTG CACAAGGACACTGGCTTTAGCTGAATATATGGTCAATTGTTGATGTGTAATCGATTTAAGAAATTAGTATTGGTGGTACT GGTAGCATGTCAATTTCGGCAGATATGCATGTTACGCGTGGAGTTTGAATGCGGGGACACAGTTTGGATATCATTCAAAT TTAC
CDS sequence (LotjaGi4g1v0042200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCCGGCGCTGCTGCAGTTCCCTGTTTGTTCCCGTTGCATCGCTGCAAAACCATTCACCTGGTGAGGCACGCGCA GGGGATCCACAATGTGGAGGGAGATAAGAACTACAAAGCCTACTTGAATCCTCAATACTTCGATGCTCATCTCACTCCAT TGGGATGGCAACAGGTTGACAATTTGCGAGACCATGTTCGTGCTTCTGGCCTTATAAACAAGATTGATCTTGTTATTGCA TCTCCTTTATTGAGGACGCTACAAACAGCTGTTGGGGTATTTGGTGGTGAGGGCTATACCGGCAAGATGGATGTACTCCC TCTTATGGTGGCAAATGCAGGAAATAGCAGTCGCGGTGCAATTTCAAGTCTAAATTGCCCACCAATTGTTGCTGTTGAAC TTTGTCGTGAACATTTGGGAGTTCATCCCTGTGACAGAAGAAGAAGCGTTAGCGAGTACCAGTTTCTTTTTCCTGCTGTT GATTTTTCACTGATAGAGAGTGATGAAGATGTTTGGTGGGAGGCTGATGTTAGAGAGACAAAGGAAGAACTTGCAGCTAG GGGACAGAAGTTCATGAACTGGTTATGGACACGAAAAGAGAAGGAGATAGCTATTGTGACACACAGTGGATTCTTGTCTC ATACTCTAAATGCTATTACAAATGATTGCCCCTTGATGAAGAAAGAAATATCCAAGCACTTCGCCAATTGTGAGCTTCGC TCCATGGTCATTGTGGATAGGGGTATGATCGGGTCGGAAACATCAACCACTAACTATCCAGGCAAGATACCTTCAGGACC GGACCTCCCTAGCGAAGTTGCGGATGAGAACGCTGAGAAATAG
Protein sequence (LotjaGi4g1v0042200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSGAAAVPCLFPLHRCKTIHLVRHAQGIHNVEGDKNYKAYLNPQYFDAHLTPLGWQQVDNLRDHVRASGLINKIDLVIA SPLLRTLQTAVGVFGGEGYTGKMDVLPLMVANAGNSSRGAISSLNCPPIVAVELCREHLGVHPCDRRRSVSEYQFLFPAV DFSLIESDEDVWWEADVRETKEELAARGQKFMNWLWTRKEKEIAIVTHSGFLSHTLNAITNDCPLMKKEISKHFANCELR SMVIVDRGMIGSETSTTNYPGKIPSGPDLPSEVADENAEK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 280 | 277 | 2.7E-162 | – | |
| PANTHER | 4 | 280 | 277 | 2.7E-162 | – | |
| Gene3D | 14 | 260 | 247 | 1.7E-32 | ||
| SUPERFAMILY | 18 | 248 | 231 | 4.98E-32 | ||
| CDD | 19 | 90 | 72 | 1.63193E-13 | ||
| SMART | 19 | 215 | 197 | 3.4E-8 | ||
| Pfam | 20 | 93 | 74 | 1.8E-6 | ||
| Pfam | 172 | 245 | 74 | 9.9E-5 | ||
| MobiDBLite | 255 | 280 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0042200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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