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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0049800 |
| Transcript ID | LotjaGi4g1v0049800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin-binding protein; TAIR: AT5G57580.1 Calmodulin-binding protein; Swiss-Prot: sp|Q9FKL6|CB60B_ARATH Calmodulin-binding protein 60 B; TrEMBL-Plants: tr|A0A151T211|A0A151T211_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0049800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:6061874..6067240) extracted from Lotus japonicus Gifu genome v1.2.
CACTTCCACGAAATTTCTCAGACACCGTACTTTTCAACCTTTTCTTCCCGCTTCCATCACTTTCTCTTTAAATCCATTCC GCCACTCGTCACAACCTGTTTGGCTGCTCAGAAAAACGGAAGAAAAGTATTATAGTAGCTCACAACACAAACAACTCCAG ATTTTTTTCTATCAGTTTCTCAGCAACCAAACAGGGAACAATTGGGAGTGATGCAGGGGAGACATGTTGTGGCGAGGGAG AAGCGAGGTTTGGATTCGGCTTCTGCTGAAGAAGGACAGCCTGATCGAAAACGACCAGCTTTGGCTAGGTTTTCATTTTC TACTGCTTCTTTTCTTTCCAGATTCTGCTTCACTGGATTGGATTCGCTTGTTCTTCAACATTGTTATGAGACTGCACTAG ATTCAGCTTTTGATTTTGTATGAAAATGATGAGCTTCTAGTTAATTTGAATTTTTCAACTTATATGTGATGTTAATTTGT GCTTACTTTTTTTTTTAAAAGGGGAAATTTTCATGGAGAATTTTGTTTTTGTGTGAGTATGAAATTATTTGAAATCATGA AAGAACACAAATTTAAACTTAGTTTGCATTTTGGTATTTTTGAGCATAGGGTATCAGCAAATGACTAGTTAAGATCAATA TTTTTTGTGTATAAACAATAGTGTTGAGGAAAATTAGGGTAGCATTTCTGTGAAGTCTTCAATTAGAGTAGGAAAGAGCA AGAGATATAGTAATTTGCAATTATATAATGCATGCTATTCCTGCTACAATTTGCAATGTTAGACATTTAAGGCTGTTTCG AGACATAGTGCTCCCTGCGGAGGCATAGGTTGGCTATCTTTATGTTTAGTATGTTTTCATCTAAATTAAAAGCTAATTAT TGTTTTTATTTTCTTATTTATATTAATTTGCAGTGTAATTGTTGAAGCACTGAAGGTGGACAGTCTGCAGAAACTTTGCT CATCACTAGAGCCAATTCTACGCAGAGTTGTAAGAAATTTCAGTTCATTTTGGTATTATTCTCAATATGATAATTTGTTA GTGGTTAAATTTTTTTAATTGATTTGTTGGAGTATATTACCTGAAGGCTGAAGTTATAACTTGCATTCGCTGCTCACCCA TCAGCCCCTAAATTAGCAACCCCTAAATTTAATGCTTTCATATTTAAACCACAAATGGTAAAATATTTCAGAGGATTTCT GAAGTGGTCCTACAGTGTTAAATTTAATATAATAGAACTCGGTGAATGTTACCTGGCATGAAAAATGTTTGGTATCGGAT GTGAGTCATATTTCTTATTTTTCTTGCTGCTAAACAGGTTAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTAGGCCCTG CCAATCTTAATAGGAGGTACACCCCCAATCCCAGTTTGTGAAATTATATCAGGGGAATTTTCATAGCACATGGGTCTGCA ATGTAAATTAAGTCCTGCACAACTCTTTAAATTTAATACCTTTGTCATATTAAGTTCTCCTATTCTTTTGCTGCTTACTC TTTCATTGCAAGATTATTTTCTGCAAGTTATTTTGGTAGAGTTTGGAATAATGGAATTAGAAGATGGTTTAAGCCAATGG AGAGAGATCTTGAGTCAAAATTAGTGACCCATATTTGTTTGGTGATATGGATATTTATTTCAGCTTCTACTGTCACTATG TATTTGTAATATCTATAATGTGTTTCTCTAATACTCTTAAGTAAAATTCAGGTCTTCCCCAAAACGCATAGAAGGTCGTG ATAGAAGAAATTTACAACTGCACTTCAAAACCAGGCTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAAGGTGAGCAA GGGGCAGCCATACATATTGTTTTGATTGATGCAAACACGGGCAAAGTTGTCACATCAGGTCCCGAGTCATGTGTCAAATT GGATGTCATTGTGCTTGAGGGGGATTTCAATAATGAGGACGACGATAATTGGAGCGAAGAAGAGTTTGAGAGTCATATTG TGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTGACTGGTGATCTGCAAGTCACTCTGAAGGAGGGTGTAGGGACATTAGGT GAGCTCTCCTTTACAGACAACTCAAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGTCTGAAAGTTGCCTCTGGTTATTC TGAGGGAATGCATATTCGTGAAGCCAAAACAGAAGCCTTCACTGTTAAGGATCATCGTGGAGAATGTTAGTTCATAATTT TCTTATATTTGCCATATATTTCTGGAAACTTATTGTAATGAAACTTCTATTGGATTGCAGTATACAAGAAACACTACCCA CCTGCCTTGACGGATGAGGTCTGGAGACTTGAGAAAATTGGAAAGGATGGTTCCTTTCACAAAAGGCTAAGTAAAGCAGG AATATTTACTGTGGAAAACTTCCTAAGACTAGTGGTCAGAGACCCTCAGAGATTGCGTAATGTGAGAATCTGAACTTTTG TTAATTCCAACTCTTCTCATGCCTCCTGCCTAGTAGGTGAGAGGTTTGATCATAGGCTAACTATCCTTCTTATGTAGATT CTTGGGAGCGGCATGTCAAATAAAATGTGGGATATCCTTGTTGAGCATGCTAAGACCTGTGTTCTCAGTGGAAAGCTTTA CGTATACTATCCTGATGATACAAGAAACGTAGGTGTTGTTTTCAATAACATATATGAATTGAGTGGCTTAATCACCAATG ACCAATACTATTCAGCTGATTCTCTCTCTGAGAATCAAAAGGTAAGCCCACCTGTGCAAAAAATATTTAATTTATGTTTC AAGTCAGACCATACCTTTTGGTTTCTTCCATAATATGTATGATTAACCTGATCTCAGAGGCCATAAGATGAAAATTTGGT TTTTCGGGGTGAGTCTGCAACCTGTTTGTTGGTACCAGCAATTCATGATGTTGAAAGCACCCAACTGAAAGATATACACG TAATTGGCTTTTTTATGTTCATATAAAATGTCCTGTGCTTGTATTGGAGCATGATATTTATAACGAACGTTGTTTCTGGA AAGTGTGTAACTATATTTATAATTTTACACTCCCTTGTTCCTGCACGGGAAAGTTCTCTTTTCCAGAAGGAGAAATGGAA ACTAAAAAAATCTACTAGCTGTTCTAAACCATAGGGAAAGAAAAAGATGAAGTTTTTTAAAATAACCAATGATTTCTATT GTAGGTTTATGTAGACACGCTGGTAAAGCAGGCATATGATAATTGGATGCATGTTATTGAGTATGATGGGAAGACTCTGC TAAGTTGCAATCAGGATAAGACTTTAGAAACCGCTCACCCTCAGGCTTCAATGGGCTCCCATGAATATTCAAATTCAATT CAGCAGATTTCCATCCCAAGTTTGCCACAACCAGTACATACAGGCCAACCATCAATGGATACAGGAGTTACAGTTGAAGG TATATACTTCCTAGTAAAGCCTTATTATACTAGAAACAAAAGCAAAAGGCTTTTGGAGTTGTTTTTTGTTTACATTTTTC TGGACCTGTTATCTTTTCGTGCAGTTTTTCTTCTGTATATTTCCCCTCAATTTTGAATCTGTTTATGGCATGGATCATCA ATATGAGGCTGTCAGGCTAAATGTTGGGCGGTAAAGAACCAACAAGAATAAGCTTAGTGTTGCAATTTAGAGAATGTTAT GATAGATGAATGATTACATAAGATTAAATAGGATTATGAATGAAATCGTTAAAGAGGAAGTTGGAGTAGCTTCCTTTATA GAGTTTCATCTGAGGTGGTTTGAGCATTTGTGAAGTAGACCTGTAGAAGCACTGGTAAACAAGTCTAATAATAGTTAAAG AAGTGGAAAACTAATTATAGATCAAAGTATTAAGAGATATTTAGATTTAAATGGTGTTTCGTTAGACTTGATTCATGACA GAAAATTATACTGTTGTCTAATTCATTTAGTTGACTCCACCTAATAGGAAAAGACAACAATTGTTATTGTTCATACACAC ACCTCCCATTATCTCTTTTCAGCCCGACTTCCCTAAAAGTGTAGGGGTTCTACTCCCCACCCAACCTAACCTCTCCTCTC CTCAAACTGATGAAGTTAGGAAATGGTATATGGATCTCTGAGCATGATTTAGATAAATTGTAATACCTCATAGTGAAAAC TTTATTTCCAAGTCCCCCTTTGAACTGTTTCATTAAATAGATGTTTGCCCTTAAAAAAATGGTGAGCCAAAATGAGAATC TTTTGATTGCTGACTGCATATTGATCTGCAGGTTATCATGATGTTACAGCTACCAGATTCTCCATGCAACCACAAAATGC AAATCTTAATTCTTCTATTCAATTTGATGACAATGCATTTCCACAACAAAACCAATTGATGAGTATATCCCACCAATCTC AGCTTCCAAGAAATGAAAACGGGCTGACCTTTGGTCCCCAACAATCAGCCACACATGGCTTCCAGACTGCCAGCGTTTCG AATTCTACTTACAGAGGACTTGAGGACTTTTTCCCAGAGGAGGAGATTCGTCTTAGAAGTCATGAGATGCTAGAAAATGA AGATATGCAGCATCTGCTGCGTATTTTTAACATGGGTGGCCAAGCACATGCTTCCTTTAATGCCCATGAAGATGGGTACC CTAATTCATCTTCTTACATGAATGCAAACGCAATGAGCTACAGTTTTGATGATGAGCCAAACCGTTCCTCAGGCAAAGCT GTTGTAGGCTGGCTCAAGCTTAAGGCAGCATTAAGATGGGGTATTTTCGTTCGGAAGAAGGCTGCTGAGAGACGGGCTCA GCTCGTTGAGTTGGATGATTCGTAATGATCTTGGTGGCGAAGCATTGCTCATGCCAGCTTCTTTCCTGACATTAAGAATT TACCATCATGCTGAAATTTTATAGCATGAAACCTTGATTGAATTGTTTGGTGCTGGCTTAATTTAAAGATTCCATTTTGC CTTAAACAGCCTGCAGAGAGGTTTCTTCCTGTTCAAGAATATCGCTCTGCAACAACTCTTCTATAGCTGCCTTATTTGTA ATATTTTCCACCCAACATTCCGACCTTCAAGTTGTAAAGGCTTTACTGTTTGCCTGTTTTAAACTGAAGGTGTCAATTGT TCCTTGAAGTTGGCAAGGTGTAGTGTGGAATCTCAGGAAACTAGGATCTTGACTAGTTTTGCTAGGTTGTATTGTATTCA GAAGTGTACCATGTTAGATGATCTCAGTCTAACTGATGTGTCTTGTTGTTTGGATGCTGTATGGCATAATAATATTCATA ATCAATAATCAATTTAAATTTATATATGCTTGTTGCTTGGAATTCTTATGTTTACAGTTTACTGCCTGTGTGCTTCATGA ATGTTTC
CDS sequence (LotjaGi4g1v0049800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGGGAGACATGTTGTGGCGAGGGAGAAGCGAGGTTTGGATTCGGCTTCTGCTGAAGAAGGACAGCCTGATCGAAA ACGACCAGCTTTGGCTAGTGTAATTGTTGAAGCACTGAAGGTGGACAGTCTGCAGAAACTTTGCTCATCACTAGAGCCAA TTCTACGCAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTAGGCCCTGCCAATCTTAATAGGAGGTCTTCC CCAAAACGCATAGAAGGTCGTGATAGAAGAAATTTACAACTGCACTTCAAAACCAGGCTATCCCTTCCCCTCTTTACTGG TGGGAAAGTGGAAGGTGAGCAAGGGGCAGCCATACATATTGTTTTGATTGATGCAAACACGGGCAAAGTTGTCACATCAG GTCCCGAGTCATGTGTCAAATTGGATGTCATTGTGCTTGAGGGGGATTTCAATAATGAGGACGACGATAATTGGAGCGAA GAAGAGTTTGAGAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTGACTGGTGATCTGCAAGTCACTCTGAA GGAGGGTGTAGGGACATTAGGTGAGCTCTCCTTTACAGACAACTCAAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGTC TGAAAGTTGCCTCTGGTTATTCTGAGGGAATGCATATTCGTGAAGCCAAAACAGAAGCCTTCACTGTTAAGGATCATCGT GGAGAATTATACAAGAAACACTACCCACCTGCCTTGACGGATGAGGTCTGGAGACTTGAGAAAATTGGAAAGGATGGTTC CTTTCACAAAAGGCTAAGTAAAGCAGGAATATTTACTGTGGAAAACTTCCTAAGACTAGTGGTCAGAGACCCTCAGAGAT TGCGTAATATTCTTGGGAGCGGCATGTCAAATAAAATGTGGGATATCCTTGTTGAGCATGCTAAGACCTGTGTTCTCAGT GGAAAGCTTTACGTATACTATCCTGATGATACAAGAAACGTAGGTGTTGTTTTCAATAACATATATGAATTGAGTGGCTT AATCACCAATGACCAATACTATTCAGCTGATTCTCTCTCTGAGAATCAAAAGGTTTATGTAGACACGCTGGTAAAGCAGG CATATGATAATTGGATGCATGTTATTGAGTATGATGGGAAGACTCTGCTAAGTTGCAATCAGGATAAGACTTTAGAAACC GCTCACCCTCAGGCTTCAATGGGCTCCCATGAATATTCAAATTCAATTCAGCAGATTTCCATCCCAAGTTTGCCACAACC AGTACATACAGGCCAACCATCAATGGATACAGGAGTTACAGTTGAAGGTTATCATGATGTTACAGCTACCAGATTCTCCA TGCAACCACAAAATGCAAATCTTAATTCTTCTATTCAATTTGATGACAATGCATTTCCACAACAAAACCAATTGATGAGT ATATCCCACCAATCTCAGCTTCCAAGAAATGAAAACGGGCTGACCTTTGGTCCCCAACAATCAGCCACACATGGCTTCCA GACTGCCAGCGTTTCGAATTCTACTTACAGAGGACTTGAGGACTTTTTCCCAGAGGAGGAGATTCGTCTTAGAAGTCATG AGATGCTAGAAAATGAAGATATGCAGCATCTGCTGCGTATTTTTAACATGGGTGGCCAAGCACATGCTTCCTTTAATGCC CATGAAGATGGGTACCCTAATTCATCTTCTTACATGAATGCAAACGCAATGAGCTACAGTTTTGATGATGAGCCAAACCG TTCCTCAGGCAAAGCTGTTGTAGGCTGGCTCAAGCTTAAGGCAGCATTAAGATGGGGTATTTTCGTTCGGAAGAAGGCTG CTGAGAGACGGGCTCAGCTCGTTGAGTTGGATGATTCGTAA
Protein sequence (LotjaGi4g1v0049800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQGRHVVAREKRGLDSASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPANLNRRSS PKRIEGRDRRNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLIDANTGKVVTSGPESCVKLDVIVLEGDFNNEDDDNWSE EEFESHIVKEREGKRPLLTGDLQVTLKEGVGTLGELSFTDNSSWIRSRKFRLGLKVASGYSEGMHIREAKTEAFTVKDHR GELYKKHYPPALTDEVWRLEKIGKDGSFHKRLSKAGIFTVENFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLS GKLYVYYPDDTRNVGVVFNNIYELSGLITNDQYYSADSLSENQKVYVDTLVKQAYDNWMHVIEYDGKTLLSCNQDKTLET AHPQASMGSHEYSNSIQQISIPSLPQPVHTGQPSMDTGVTVEGYHDVTATRFSMQPQNANLNSSIQFDDNAFPQQNQLMS ISHQSQLPRNENGLTFGPQQSATHGFQTASVSNSTYRGLEDFFPEEEIRLRSHEMLENEDMQHLLRIFNMGGQAHASFNA HEDGYPNSSSYMNANAMSYSFDDEPNRSSGKAVVGWLKLKAALRWGIFVRKKAAERRAQLVELDDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | - | – | |
| MobiDBLite | 1 | 28 | 28 | - | – | |
| PANTHER | 7 | 623 | 617 | 0.0 | – | |
| PANTHER | 7 | 623 | 617 | 0.0 | ||
| Pfam | 92 | 383 | 292 | 2.5E-132 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calmodulin binding | Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. |
Expression pattern of LotjaGi4g1v0049800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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