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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0054400 |
| Transcript ID | LotjaGi4g1v0054400.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT3G09010.1 Protein kinase superfamily protein; Swiss-Prot: sp|C0LGH2|Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130; TrEMBL-Plants: tr|V7CPL9|V7CPL9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0054400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:6560808..6564437) extracted from Lotus japonicus Gifu genome v1.2.
TCCTTTCCGAGTGATATATTTTATTCGTTCAATTTGAGTAATGCCAATCAAGTCTTCTTTCATTTTGATCACTATCATAG GCATAGGAAGGTCTAACAAGAGCAAGACAAAATCCCCATAAAGTTGTAGGCTTCGAATGATAATTATGTTATTTATTTTG CACATCAGTGAAAATATGTGATAAGAATGTATAATCAGTAATACTTTTGTAACTACATTTTCCCCCAATTATCACTACAT TTAATGCCTGCTTCTGCTGTCTTGTTCGTTAGGGTTTCCCCTTGATAATATTACGCATTTCTCTGAAAAGGACCTGAGAC TAGCCACTGATAACTATCATCCAAGCAAAAAGATAGGACGAGGAGGTTTTGGAACTGTTTACCAGGTATTCAGGTCACAG ATTCTTGTATAAGTTGTAATATTAAGGAACTATATGATAGCTGGTTAGTTGAACTTACCAAAGTGATTCATCAGGGATGC TTATGCTTTAAAAATGCTACTTTTATATTTGTGATTTGTTTATTTCTTTCTTAGATGTTGAATTTAGATTCCATTTTTGA TGCAAGTGTCACTCTTACCAGTTAGGCATCTATAATGTGCAATGGAAGATATTATTATTAATTTTATTTGGGGAAGTAAA ACATCATTACATTCAAAAAAGTCTTTTCCATGCTCTCTCTCTCTCTATATATATATGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTAAACAGATTCTACAGAAGGGGTGATTACAAGAATATCCCGCTCTAGATGATGGCCATGTATTATAACTAA CTCACCCCATGGTGCCCACCTACACATTCAAATAACCAATGCCCCATTTTCAGGATGTATGACTTGAGGACTCATATCTC AAGCTTTTGGCCTTCTATTGTAAACCTTCCATATCTTCGGTCCTCACTCCTCATGACAATTGGTCAATAGGTTCAGGACT TGGGTCCCCTTAACATTGTGAAAGAGCTTTTCTGCTCTGGGCACAAGGAGTTCTTCAATTTTCAGCTTACTCAGTAAAAA ATAAAAAATATTAATTTAGCATTAAAAGGTAAATCCTTCCATCCTTTTATACTTGATAAGCTGTAAAAACAAAGGCTGTC TATAGAATTGATTGAAAAATATTTGCTTCTTCCTACCCTTTCCCTCTGCTGATATTAGACCTCCTTTGTAATTGAAAAAA ATAAAATGTTATATTTTGTGAGGACCCTGTATACTCTAGCTTACTCAAGCGGAGTAATAGCACAGCATACCAAGAAATAA AGGCACATTATTCTCATGTTTTGATCTTATTGATGGTTAAGCCACTGCTAAATATCTATGTTCAAATTTTACTAGGGAAC TTTAAAGAATAGAAGACAGGTTGCTGTGAAGTCCCTTTCAGTTGGGTCAAAACAAGGAGTTCGTGAATTTTTAACTGAGA TAAAAACTATATCAAATGTCAAGCATCCAAACCTTGTTGAATTAGTCGGTTGCTGCGTGCAAGGACCTAACCGTATATTA GTCTATGAATATGTGGAAAATAACAGCCTTGATCGCGCATTACTTGGTAAGTTTGACGAAATGCTTTGGTGTGAATTATG ACTAATTAAGATTCATATGCTGATGAAAGGATGAAATGATAATCTTTTTCAATTTTCTTTTTGTAGGATCAAGAAGTACA AACATCAAACTAGACTGGGAAAAAAGATCTGCTATTTGTAAGGGTACTTCTAGGGGTCTTGCATTTCTCCATGAAGAACT TGTGCCACACATTGTGCACAGAGACATTAAGGCTAGCAACATACTACTTGACAGAGACTTCAATCCAAAAATAGGAGATT TTGGGTTGGCTAAATTATTTCCAGATGACATCACTCACATTAGCACGAGAATTGCTGGTACAACGTACGTTATGTTTCAG ATTTCTAGTTAACTTTGTATGTTTTTCTTTTTTGCCATTGCTCTGGGAGATTTCTCTTTTGCCATGTTTTCTTGATGTGC AAAGGCTCCAATGCTCTCAAAATAACTTCACTCATCTCCCTCTCAACCCATTTTCCTATTTATAAGGAACGTGCATTTTT CGTTAACTAACTATTAATAGAAAAATATTTAGTTAGTAACTTAATGAAGGAGGCATGTTGCTTATAAATAGGAAGAGGGG TTGAGAAGGTGAGAGAGTTGGCGCCTTTGGGCATTAATACGTGCAGACCCTCGAAGTTTTACAATTCGAAGAGTGCGTTC TATATTTGTAATTGGGGTTAATCCCTAGTTTTTTTTAGTATGCTACCAGTTTCTATTGGTATATCTCAAGAAATATGATT TCAGAGAAACTGTATTTGTAGTTTTGATAAAAAATATAAAGCTTCATGGCCCATTTGTTTGAACTAAAAATTCGAAGGTG ATATTATTGGGAAACAGCTCTGGGAAACATGTCCTCATAGTTATGGTTGGGCATATAGTTAAAAAATATTCCTTAACATT TTAACATACTGTTTTGAAAATTATTTCTTGGAACGTGGAACTGATTTATACTATAACCTGCTTTGGTTTCACCATACACA GCGGTTACTTAGCACCGGAGTATGCAATGGGTGGCCAGTTAACCATGAAGGCTGACGTGTACAGTTTTGGGGTTCTTATA CTTGAAGTAGTAAGTGGCAAAGGCAGTGCGAGGACAAACTGGGGAGGGTCAAACAAATACCTCTTGGAATGGGTACGTAG CTTTCAGCTTCCCATATTTATGAGTTGTATTGCCTCATCATTCGTTTCATGTTATGTAACTTTGTATGGTAATAATACTA TTCAACCTACAAAATCTGAGTATGTCATTCTGATACCTTGGTGCTCTTGATGTTGGGAGCAAATTGAGAGGGGAATGAGA AAGAAATAAATGAAAGCCGGGGAAGATAGAATGTGACTTTTTCACTTCTTGCTTGTACTTGATTGAATTGAGAGGAATGA AAATGACTAGAATGTAGTTTCTCATGTTTTTAGAGCCCAAAAAACAGTAAAATGAAAGAAAATTGTTAATTTTGAAACCT CAAATGGACCGTAAGTTTTTTTTTTTTTTTTAACTTCACTAACTAAAAGTTTCTCATGTTTTCTTTTTGAACCATGTTAT GAACCAACTATCTCAAAAGTTTAAGTTGGGTGAAGAGAAGACACATGAATGATTATTGAATATTATATTTCTAACATTAA CTACCTCGATCCCCATATTCAGAAGTTTTCTCTAACCAAACACATGCAAGATATGCATGGTATTCTCAATGTGAGACCTT AGCTGGACATAATGTTTTTTATATTTCAATAACAGGCCTGGCAACTTCATGAAGAGGGGAAACTGCTGGAGCTTGTGGAT CCAGACATGGATGATTTTCCTGAGGAAGAAGTAATTAGGTACATGAAGGTTGCTTTTTTTTGCACACAGGCAGCAGCAAG CAGAAGGCCACTGATGTCCCAGGTTGTTGACATGCTGACCAAGAAAATCAGGCTCAATGAAAAGCAACTCACAGCACCAG GGTTCTTCCAGGACTCAGGAGATTCCTCTCTGAAAAAGTCAACACTTGAATCCACAAGCTATCAATTTAGCTCTGCCCCT GTCAGTATTACTCATGTGGCCCCACGTTGA
CDS sequence (LotjaGi4g1v0054400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGCCAGTTAACCATGAAGGCTGACGTGTACAGTTTTGGGGTTCTTATACTTGAAGTAGTAAGTGGCAAAGGCAG TGCGAGGACAAACTGGGGAGGGTCAAACAAATACCTCTTGGAATGGGCCTGGCAACTTCATGAAGAGGGGAAACTGCTGG AGCTTGTGGATCCAGACATGGATGATTTTCCTGAGGAAGAAGTAATTAGGTACATGAAGGTTGCTTTTTTTTGCACACAG GCAGCAGCAAGCAGAAGGCCACTGATGTCCCAGGTTGTTGACATGCTGACCAAGAAAATCAGGCTCAATGAAAAGCAACT CACAGCACCAGGGTTCTTCCAGGACTCAGGAGATTCCTCTCTGAAAAAGTCAACACTTGAATCCACAAGCTATCAATTTA GCTCTGCCCCTGTCAGTATTACTCATGTGGCCCCACGTTGA
Protein sequence (LotjaGi4g1v0054400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGQLTMKADVYSFGVLILEVVSGKGSARTNWGGSNKYLLEWAWQLHEEGKLLELVDPDMDDFPEEEVIRYMKVAFFCTQ AAASRRPLMSQVVDMLTKKIRLNEKQLTAPGFFQDSGDSSLKKSTLESTSYQFSSAPVSITHVAPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 128 | 128 | 3.5E-51 | – | |
| PANTHER | 1 | 128 | 128 | 3.5E-51 | – | |
| Gene3D | 1 | 114 | 114 | 4.5E-20 | – | |
| SUPERFAMILY | 2 | 128 | 127 | 4.19E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0054400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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