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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0060400 |
| Transcript ID | LotjaGi4g1v0060400.4 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DEHYDRATION-INDUCED 19; TAIR: AT3G05700.1 Drought-responsive family protein; Swiss-Prot: sp|Q688X9|DI191_ORYSJ Protein DEHYDRATION-INDUCED 19; TrEMBL-Plants: tr|A0A0S3QZF6|A0A0S3QZF6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0060400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:7271719..7275099) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATTCTGACTTCTGGACCTCGCGTCTTGCCGCCGCCAAACGCCAATATACTCTCCAGCATCACCATCCAAGCTCCCA TTTAGGTTGGTGTTCTTGGAGGTTCCCAGTTTTTAATTTTCTGAGAAAAAACAATTCTGGGTCTTGTTCAAAATCTGATT TTTTTTTTCTGGGGTGTGTTAAAATCTGATTTTTTATTTCTGGGGTGTGTCAAAATCTGATTTTTTTTGTTTCTGGGGTG TTTCAGATCGGTTGGGAGTCGATGATTTTGATGTGGAAGAAGAGGTGCGACCAGATTTCCCTTGCCCGTATTGTTATGAA GACTTTGACATCGCTTCCTTGTGTTCTCATCTTGAAGATGAACATTCCTGTGAATCAAGAGTCACGGTAGGAGGCTCTTT TTGCATCTGATATTGTTTCTTGTGTTGTTATTTAGATCTATGTTCTGTTCTTCTTTGATACGTTTGTTTGGTACAATTGT TTTTTTAATCTTCTGATAGGTCCTGCTAAAGAAATTTGTAGCCTTGATAGCAAAGTTGTTAGAAGATTAGTATTAGTTTC TTCAAATGATTGAAATGAAAGCTTATGGATACTTTAGCTAGTTGTACAGAGGAAATCCATGAAGGATTGAATTTTCTCTT TAAGATACACAATGATCATATAAAATGAGATATTGGGGAGGTGCCTATCCTAGAAATTAGAAAAGCTTACCGAAAATCAG TTTAGGTGGTATGATTATGGAGGTACTGGTGAAAAGAGTTGATAACATGGTCTTTAGTCCTATGAAGAGGGGTAGAAGGA GGCTGAAAAGAACATTGAAATGAATTGTTAAAAATGATCCAATTATCATTAATATCGCTCAAAGTCTGGTTTTTGATCGA GTTCAATGGCGTAGTTTAATTCAAATTCATATAGCCGACCTCACTTAGTGGAATAAGACTTTTGTTGTTGTTGTGGTTGC TGTTCTTGTTGTTTTCAGTCTTAGATAAATTCCAAGACCTGCCCTGCTGCATAAGTGCATATAGCGACATTTTTCTGCAT CACTGATTAATATTTAGGATCTTGGGCATGTTACCTACCTCCCATAGGTTCTTGTCATGTTCTTCCTTTTGATTGACCTG AAGATAAGGCTTTAGAATTGTGATTTTCTGGTTCACACTAGCATGCGAACTTGTGACCTTCTGTTTTCTACCACTCCTCC TTACTCCTTATGAAAGATACTTTAGGATTCGGTTACAACATATCAAGAAACGACAATGTGAGTTCACTCAAGAATGTGCA TGACTAATTAAGTTGAACTTTGTGGGGGAATAGAGTTTGCGTGTCAAGCGGAATTATGTGGTTTTGTTGGGAGTTTGTAA TCTATTGTAATTATAATATAGTGAGTGGACAACCATAGACAATTCATAGATAGAAAAAAAAGGTTCAACGGTGTATAACC GAGAAGGCCCTATGCTAAACCTTTTCTTTCTGCATAGATACACTTAGAGCGTATAGCTCTAATGAGAATTGTTTCTCTTG TTCGAATTATTTGAAAATGCCCTGATGTATTGTATATCTTTGTGCCAAAAGAACACCTCATCGAGATGGTAGACGGTTCT ATATCATTTCATAAAAAAAAAGGAATCTGTTAGCTATCATTAACAATATTCTGATCATTGAGATTGATTGGCTTCTCAAT TGAAATACAGTTGGTTTTGTTTAGTTTGATGAATTTATATGAATAAACTAAATTAAGGAAATACCTAAGAGGCTGAAGAT TAGTGTTTAGTGTCTGTCTTATTACTTCACATCCCTGCCTCAAGGATTGAAGTGACTCTAATCTGAATGTGATAGTCTCA TGCTTTGTTTTTCTATCATGCAGATTTGTCCTATATGCTCAGTTAAAGTTGCACGGGACATGTTGAGTCACATAACGCTG CAACATGGGCACTTGTTTAAGATATCCTTTATCATGTTGTTTTGATTGAAAATAATGTTTTGCTTAGATAATGAGTTGTT TCTCATGTAGAAAATGAAAAAACTTTGATTGCTTCCCTTAACTGAGGATTACATACAGAGAAGGCGCAGGTTAAGAAGAG TTGCTATTCCAAACAGTCAGACATTGTCTCTTTTAGGTCGAGATCTTCGCGAGGCTCATTTGCAGGTGCTTCTTGGTGGT AGTGGTGCAGGACATCGGTCATACAGAGACACAGTGTCCAATGCAGCTACTGATCCATTCCTATCCTCTTTTATGTTGAA TTTCCCTGCTTGTGAAGCAGAAGAGATTTCTAAATCTGTGGTATCGAGTGCTGAAGATTCTGCTGCAAAGAGTACAGCAC CTGCACATATTTGGAAATCAAGGTGATTTTTTTATTAGTTTTGGCTCCTTAAACATTGCTAACAGAAATAAAAAAAGCCT TATCCCACTAAGTGAGGTCGCTGGTCGGCCAAATTGGTCACATGATCCATATTTAAGAAACAGCAGTTTTAAGTTGGCTG CCGCAGGCCTAACATAACCTTTTGTCCTTCAAGCGGGCTTTAGGACCGGCTATGTGGAGTTTGGCTCCTTAAACATTATT TAATAAAAATATATTGACCAAAAAATTTAATATTGAGTTAAAAAATTTCAATCCCTCAAATTTACATAAAACTGTAGAAA ATGCGTCAGTATTGTAGTAAATCATTATCCTCCTTATATTAGAATCTTTCCTAAACAATTCTAATCCCTCAAATTGTTAT GAAACTCTAGAAAATGCATTAATATATTAAACCCTTGTAGTGAGTCAATATCTTCGTATATTTGTGATATACATGTACTA AAATACTTCAACATGTCTCGAATATCGGCCATGTATGAAACTGGTTTTGCATGTTCCTCTGGAAGAATTTGTTACACCCT CAAATGAACTGAATGTAATGCCACAGGGTGGGCAGAAGCTGAATTTGTGACCTTTGGCTTTCATACTATTTACTAGTTGT TCGTATCTCTATTTATCTTTTTTTGGGTGAATATGTTCTTTTGGTGCATATATCTATTTATCTAGGAACTGATTAGTTCA CTGGGAGTTGATAAACTTACCCCTCATTCAAACCAAATTTTCATACTCATCCACATCAAGAACATGTTTGGATCGGCTTC TCTTTCCAGAAAATCAGTTCTGCCACTCAAAAGCTACTCATAAGTTTCTCCCCATAATTGATTTTGGCTTTAGAATCCGT TGTAGAAGCATATCCAAACATTCACTGAATAGTGCCCTTGAATCACAGCTTTGATCTGTCCCCTCTTTGCAGTTTTGATC CCTCCTTGAGTATTGAAGAGCGAGAGAAAAGGATAAGACAAGCTGCTGGGAGATCTGGTTTTGTGCAGGATTTGTTTCTT TCAACTTTGTTCAACGACTAA
CDS sequence (LotjaGi4g1v0060400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCTGACTTCTGGACCTCGCGTCTTGCCGCCGCCAAACGCCAATATACTCTCCAGCATCACCATCCAAGCTCCCA TTTAGATCGGTTGGGAGTCGATGATTTTGATGTGGAAGAAGAGGTGCGACCAGATTTCCCTTGCCCGTATTGTTATGAAG ACTTTGACATCGCTTCCTTGTGTTCTCATCTTGAAGATGAACATTCCTGTGAATCAAGAGTCACGAGAAGGCGCAGGTTA AGAAGAGTTGCTATTCCAAACAGTCAGACATTGTCTCTTTTAGGTCGAGATCTTCGCGAGGCTCATTTGCAGGTGCTTCT TGGTGGTAGTGGTGCAGGACATCGGTCATACAGAGACACAGTGTCCAATGCAGCTACTGATCCATTCCTATCCTCTTTTA TGTTGAATTTCCCTGCTTGTGAAGCAGAAGAGATTTCTAAATCTGTGGTATCGAGTGCTGAAGATTCTGCTGCAAAGAGT ACAGCACCTGCACATATTTGGAAATCAAGTTTTGATCCCTCCTTGAGTATTGAAGAGCGAGAGAAAAGGATAAGACAAGC TGCTGGGAGATCTGGTTTTGTGCAGGATTTGTTTCTTTCAACTTTGTTCAACGACTAA
Protein sequence (LotjaGi4g1v0060400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSDFWTSRLAAAKRQYTLQHHHPSSHLDRLGVDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTRRRRL RRVAIPNSQTLSLLGRDLREAHLQVLLGGSGAGHRSYRDTVSNAATDPFLSSFMLNFPACEAEEISKSVVSSAEDSAAKS TAPAHIWKSSFDPSLSIEEREKRIRQAAGRSGFVQDLFLSTLFND
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 75 | 75 | 7.3E-90 | – | |
| PANTHER | 1 | 75 | 75 | 7.3E-90 | ||
| Pfam | 45 | 73 | 29 | 2.4E-8 | ||
| PANTHER | 76 | 204 | 129 | 7.3E-90 | – | |
| PANTHER | 76 | 204 | 129 | 7.3E-90 | ||
| Pfam | 91 | 202 | 112 | 2.2E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0060400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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