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LotjaGi4g1v0064200.1

Overview

Field Value
Gene ID LotjaGi4g1v0064200
Transcript ID LotjaGi4g1v0064200.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Vascular plant one zinc finger transcription factor protein; TAIR: AT1G28520.1 vascular plant one zinc finger protein; Swiss-Prot: sp|Q9SGQ0|VOZ1_ARATH Transcription factor VOZ1; TrEMBL-Plants: tr|I1KLR2|I1KLR2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0064200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:8043290..8048168) extracted from Lotus japonicus Gifu genome v1.2.

TAATAATGTTAGCTTTATTGCCTAAACAGTGAGGAGGCAAGAGAGGGAGAGAAGTCTCCAACACAAAAAAAGCAATTCTC TTTTTCTCCTTCCCATTCATTCCTAATTCCTATATAATCACTTTCCTCTGCTTCTAACTTTCTGGAATTCACACACTCTG GCTTTTCTTTTCTGCTCAAAATTCACTGATCATCACACAATCTGAGGTAACAATCGTTCTTCTCTTGTAACCCCTAAGCA AAATCAACACACCTTTCAATCGATCTGCAGCATTTTTTTTGTTCTGCAAGTTCTTCATACAATTTTGGATTTGGGTTTTT GATTTCTTACTGGAAATTGACTTGGGTCAGCTCGAGTTTTTGCTTTCATTTTCTTCAAGATTGAGGTTCATTTTGATGCT TAACTTTGTGTTTTTCTTTGAATTTGGGGGTTTTGTTGTCAAATGATTTGATGGTTTTGATCTATATTAGGGTTTATTTT TTATCTGGGGTTTGCGTTTTTGGGTTAATTAGTTGAAAATAGGGCGAATCTTTTGAAATAATTTGAATTTGACATGATTC TCAAGTGGGGCTGTTGGATTCTTTGTGTTAAAATTTATGGTCTTTTGGGTGTGTGCATGGGGTGGTGGAATATGCTTTGT GATCATGTTAACTTTACCTGCAAGTTGTGTGCATCTTTTGGGTTCTGTGTGTGTGTGGGGGGGTATTATTTGTGGTGAAT TGAATCTCATTTTGTTGTATTGGTGAGTTTAGGGTGTTATAGGAGGAACTTAAGGTCTGGCAATGAAGAAGGTTTCCAAG ACAAGCTGCAAGTCTGCATCACACAAGCTCTTTAAGGACAAGGCGAAGAATCGTGTTGATGACCTGCAGCTGGTGTTTCT TGATCTGCAGTTTGCTAGGAAGGAGAGCCGTACGGTTGATGCTGCAGTTCTTGAGGAACAAGTCCATCAGATGCTTCGTG AGTGGAAGAATGAGCTCAATGAGCCTTCGCCTGCTTCTTCTTTGCAGCAAGTAAGATGATATTCCGAGATGTAACTGATT AGTCTTTGTTTGAAATATCTATCATGGGTTCTTGTTTCTTATCTAACCTTTACTTTTCCAATTCTGATGGAGATGTGTGA ACTTGAATGGCAATATTAGTGGTAAGGCTGTGATTGTGAACTTTGGTGTTTGTGGGTGATTTTAGGATGGCAGTCTTGGG TCATTCTCCACCGATATCTGTCGGCTTTTGCAGCTCTGTGAGGAGGAAGATGATGCCTCTAGTCCATTAGCTGCACCTAA GCCTGAGCCTGTTGATCAGACTCTTCCAGCTGGGAGCAAGGTCATATTCCAAGGGGTGAGCTTCCTTTTCCTTTTTGGGG GATAACTAATTTATTTTAGCTATAATAATTCTGTGATGTTAGCTGTTTGAGTATTGATTATAAAGTGTTAGCTGTTTGAG TATTGATTGTAAAGTTTCACTATATTTATTAGGAGATGCTTCAGAAATGGTTGATGTCATGTAAAGTAAACTGAAAGACA TCATCCTGTGACCTCTTTCTTTCACATGCAGACCAATGTTGACATAGTTCTAATGTTGAGTATGTGAAACAAGGCCTCTC TTCAACAATTGTATTTGGATTGAATAGATTATATATTTCTTTGTGTTTTCCTTGGGTGGGGTGTTAAAGTAGAGGAGGCA AATTCATCATCGGGAGGGGATATAAATGTCCGACATCTTGTCAACCTTGTTGTAGAATATAGAGCACTTTATGATATGTT GATGCGCTTGCACTCAAATTTGTTTTGGTTATCATTAACTGATTAGCATTGTGATTGAATTGTATGCATTGCAATTCGAT TCACACAATTTGGTGCTGAGCCTTCTCCCAATTGCTATCGACTGCATGGAGTACATTTACTTGGTGGATTTTGAATTGCT GTGACCATGGTAAAATCACACGAATCTCAATTATTCTGTTCTGTGATTCTGGCTGTACAGATCTTGGAAGGACAGTGTGC CAAACATCTACTGTGTGGTGATGATGGAATGGTTTGGTATGGCCAGAATGTTGTCGGTAGAGAGTTATATGTAGATGGTA GCTGAAGACAGGCTTAGGTGTGTCATGGCTTGTTGCTGGAGGGGGGGGGGGTTGTCCAGTCTCCAGTGGCAATGAGCCTC GAACCTAGGCAAAGGAGCACTATATAAATCCATGTATTTTTTTGGCCAGGATTGGCCATTGGAATGTATTTTTCTTTCTG GGTGACTTAAGGAAATGCTATACAGATCAAAGCATTAAGAAGGGTCTAGATTAAACAATGTTTTATGGTTAGGAATTGAG GTCACTTGATCTAATGTAGCTGACCTCATCTAGTGGAAAAAAGCTTTTGTTGCTGTGGTAGTGTAGTGGAGATAAAACTA CAAAAGCAGAGGCAGAAAACTAGTGTCTAAGATGAGAAACTTTCATCTCATTTGCAAGCATATTAGCAGATAAAGGTTGA GACCAGGGGAGGGAAATGGAGAACACACATTCAGTCACTCGTTCTAAGGATGAATTACGAGAGCAGCGTATATTGGTCTA GTCCTGGTTGAACTATCTAATATTTGGTTAATTTTTAGATCCTATTTTTTTTTATAATGTCTAGTATGCAAGCCGACGAA GGGTGAGACCAGGGGGAAGGAAATGGACAAGACACATGTTACTATATTTAATTTTGCCTATAGAGTTAAGCATATATTGG ATTAATTCCTGGTTTTCTGGTTAAACTATCAAATCTGGGACAATTAAGACGTAATTATTTTGGTGATGATTGTGTACTGT TTTTGATCCATATGTGTAAGATGATATTATCTCAATTGAACGATTACTTTCTATTGCAACATACATTTGGCAAGTTTTTT TGCTGCCCTTGTTTAATATTCCTCGAGTAATGGAAAACAAGAGAGGACACTCTTATGGTTTAGCCATTCTTTGGAGTTTA TGATTGTATTTTTCTCCACATTTTCTCCACCTGTAATTGTAATAAGTTTCCTGATTTAATTGTAAACCAGGGCCAACAGC AACATGATTTTCCATTGGTTAATGAATGCAAGCACTCAACCTCAAGAGCTCAAAATATGGCAGCTAACAAGCCAGATGGA CCTGCTTTAGAATATCATCAGTTTGATTTGCATCAGGACTTTGATCACAGCTTTTATACTGGATTTAATGGCTCAGGTTA TTGTGAGGAGGATGCTATTCCTCATATATCTAGCTATCTACCCAGTATCTGCCCTCCACCTTCTGCTTTCTTAGGCCCAA AATGTGCACTTTGGGACTGTCCAAGACCTGCACAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTATCATGCTGCT CTAGCTTTGAATGAAGGTCCACCAGGTATGGCCCCAGTTCTACGACCTGGGGGCATTGGTTTGAAGGATAATCTACTTTT TTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTCGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCAT GGAATGCCCCTGGTAATTTAATCTTTTATATCTTTTCTTCAGTTTACATTTAACTATTTTATATATATCCGCTAAAAGAG CTTACAGGATTTTTCTTTCTTTAATTGATTTGCTTCATGTTTGATTGCAGAACTCTTTGATCTTTCTGTTCTTGAGGGTG AGACTATCAGGGAGTGGCTCTTCTTCGATAAGCCTCGGCGAGCATTTGAGAGTGGAAACAGAAAGCAGAGGTCATTGCCA GATTACAGTGGACGCGGTTGGCATGAATCTAGAAAGCAAGTGATCAATGAATTTGGAGGGCTGAAGAGATCCTACTATAT GGATCCACAACCACTGAACCATTTCGAGTGGCACCTTTATGAATATGAGATTAGCAAGTGTGATTTATGTGCCTTGTACC GATTGGAACTGAAGCTCGTTGAGGGAAAGAAGAACTCCAAGGCAAAATTAACAAACGATTCAGTTGCTGATCTGCAGAAG CAGATGGGAAAGCTCTCCGCCGAGTTTCCGCCAGATAACAAAAGGCCTGCTAAAGGCAGAGCCAAAATCAATGCCAGAGT TGCCATGGGTGGTGTCTATTCACACAGAGTGACTCCACTGAACGGAACATATGAGTATGGGTTAGCTTCCCCATATGACT ACCTTGTTGACAACTTGGGTGACTACTATGGGACATGATCTACCTTTGAGTTATGGTACAGGATGCTGCATTCAACCTCC TTATAAATTCTCTGCTGGTTTTTTTCTTTTGGGGCCTTCTACTTTCTCTGATTTGTTTTGTCCCCCCTCCTAAGTAACAA GAATCCAAGGTTATTTTTTGCCCTGGCAAGATATTGTGAATATCTCATTCTCACTGGAGTGCAGCACTAGAAGCTGCTGG ATGCTGAACTAACTTAGAACTTGCAGCAAATTTTGCTGTATATTATTTATACTAGCCAATTTGATGGATCCTAGAATCTT ACTAGCACCATTGTTTAGGCTCAAATTTGCTGTGGTTCAGCTCTGACTCTGTTTTCCATACCATGCTAATTAATGTAAGT CATTTACACTATTTTATGGTATTAGCCGCAGGACATGCCTTCAAAGGTACATAATAGTGGCTGTATAATAAAAATGTTTC AGTCCCCTTTTAGCAATTTTTACAAGTCAAGAAAAAAGAATCTTTGCCAGCAGCTTATTTTTAAATCATTTTACTTGCAA TTAAGTAATTAAGTAATAAACATGTGTGTAATTTTTAATTTGTTAAAAATGATGATTATTTTTATTAAAACTAAACATGT GTGATATAGATGTATGTCTTGTTTGGAAGATTTTATTTGTGTTTATTTTATAGTATAATCGCTTATGTAAGTGTCTGTG 

CDS sequence (LotjaGi4g1v0064200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGAAGGTTTCCAAGACAAGCTGCAAGTCTGCATCACACAAGCTCTTTAAGGACAAGGCGAAGAATCGTGTTGATGA CCTGCAGCTGGTGTTTCTTGATCTGCAGTTTGCTAGGAAGGAGAGCCGTACGGTTGATGCTGCAGTTCTTGAGGAACAAG TCCATCAGATGCTTCGTGAGTGGAAGAATGAGCTCAATGAGCCTTCGCCTGCTTCTTCTTTGCAGCAAGATGGCAGTCTT GGGTCATTCTCCACCGATATCTGTCGGCTTTTGCAGCTCTGTGAGGAGGAAGATGATGCCTCTAGTCCATTAGCTGCACC TAAGCCTGAGCCTGTTGATCAGACTCTTCCAGCTGGGAGCAAGGTCATATTCCAAGGGGGCCAACAGCAACATGATTTTC CATTGGTTAATGAATGCAAGCACTCAACCTCAAGAGCTCAAAATATGGCAGCTAACAAGCCAGATGGACCTGCTTTAGAA TATCATCAGTTTGATTTGCATCAGGACTTTGATCACAGCTTTTATACTGGATTTAATGGCTCAGGTTATTGTGAGGAGGA TGCTATTCCTCATATATCTAGCTATCTACCCAGTATCTGCCCTCCACCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTT GGGACTGTCCAAGACCTGCACAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTATCATGCTGCTCTAGCTTTGAAT GAAGGTCCACCAGGTATGGCCCCAGTTCTACGACCTGGGGGCATTGGTTTGAAGGATAATCTACTTTTTTCTGCTCTTAG TGCAAAGGCACAAGGAAAAGATGTCGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCCCCTG AACTCTTTGATCTTTCTGTTCTTGAGGGTGAGACTATCAGGGAGTGGCTCTTCTTCGATAAGCCTCGGCGAGCATTTGAG AGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTACAGTGGACGCGGTTGGCATGAATCTAGAAAGCAAGTGATCAATGA ATTTGGAGGGCTGAAGAGATCCTACTATATGGATCCACAACCACTGAACCATTTCGAGTGGCACCTTTATGAATATGAGA TTAGCAAGTGTGATTTATGTGCCTTGTACCGATTGGAACTGAAGCTCGTTGAGGGAAAGAAGAACTCCAAGGCAAAATTA ACAAACGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAAGCTCTCCGCCGAGTTTCCGCCAGATAACAAAAGGCCTGC TAAAGGCAGAGCCAAAATCAATGCCAGAGTTGCCATGGGTGGTGTCTATTCACACAGAGTGACTCCACTGAACGGAACAT ATGAGTATGGGTTAGCTTCCCCATATGACTACCTTGTTGACAACTTGGGTGACTACTATGGGACATGA 

Protein sequence (LotjaGi4g1v0064200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKKVSKTSCKSASHKLFKDKAKNRVDDLQLVFLDLQFARKESRTVDAAVLEEQVHQMLREWKNELNEPSPASSLQQDGSL GSFSTDICRLLQLCEEEDDASSPLAAPKPEPVDQTLPAGSKVIFQGGQQQHDFPLVNECKHSTSRAQNMAANKPDGPALE YHQFDLHQDFDHSFYTGFNGSGYCEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSYHAALALN EGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFE SGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDLCALYRLELKLVEGKKNSKAKL TNDSVADLQKQMGKLSAEFPPDNKRPAKGRAKINARVAMGGVYSHRVTPLNGTYEYGLASPYDYLVDNLGDYYGT 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 475 475 3.9E-244
PANTHER 1 475 475 3.9E-244

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Biological process Positive regulation of long-day photoperiodism, flowering Any process that activates, maintains or increases long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0064200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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