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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0066700 |
| Transcript ID | LotjaGi4g1v0066700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix-loop-helix transcription factor; TAIR: AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30; TrEMBL-Plants: tr|A0A151RD58|A0A151RD58_CAJCA Transcription factor bHLH51; Found in the gene: LotjaGi4g1v0066700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:8337211..8341961) extracted from Lotus japonicus Gifu genome v1.2.
TAATTAACGAGCCCTCTATAAAACAAGTACATATATTCACCATGAGACCAATGTTTCTCCTCGATACATTGCATATATAA TATATCAGCTCAAGAACTGTTCTCTATCTAGCTAAACAGCCTTGCTTGAACACCGCCATTCTCTGTACTTTGATTGAAGC ACGCGTCAAGTCTCACTGAAACTCTCAGTTCCCACAATTCTTCTCCCTTTTTGTCCTTTCCCACCTAGAAATGGTTTGAT TCAAATCCATCAAGAAGAAAAATGTGTTTCTTTTCACATTGATCTTCACCCTTAACCCTCTTCAAGGTTTTTTCCCTTGT GTAATGGAAGTTATGACCAACAACATCATCAACAAAAAAACCAACATAGCAGGTTCTCACAACATCATCCATCTCCAAAA GCTTTCTTCCTGGTTTTCTTCTTCTATTTCTCTAGTATATCAATCACCACTTAAATACAAGGTTCAGAACAATGGTTTAT ACTTCCTTTTGTGACAACAATTCTTCATCTGGTTTCAATCCTAATTTGCATGACGTTGGAGCTAGTAATTCCAATGGTGT TTCGCGAGGTAGGTTGTTATCATCATCGCGTTCAATGGTTTTTGAGAGTGAGAAGTGTGAGCTTGTGAAACCCCCTGCTG CTGCAACTGCAAATAAGGTTGGAACTGGAAAGAATGAGCATTCTGAGGCGAAAGCTTTAGCTGCTTTGAAGAGCCATAGT GAAGCTGAGAGGAGGAGGAGGGAGAGAATAAATGGCCATCTTGCAACACTGCGTGGTCTTGTGCCCTCCACTGAAAAGGT GTGTTTTTAGTCCTCAAATTGTTCTTTTGTTGTCTTGGTTATCATAATAATTGAATTCTCATTCTCTGCCGCCTCTTCGG TCTCTACTGCTGTAACATAATATGTGTATAAAAGTTTTGACCAATTTAAATTTTTATGAATCAATTAAACTTTTTCATAT AAGAATCAAGGGTTAAGAATTTGCAGAAAAGAGCTGCAGAGAATATTGCTGCAGACGATCCATCTTGTAATTTTTAATGA GTATTGATATAATTATTTTAGGTTTTAGTTTTGTGATTTCAATTTGATTGATATAATTGAATTACTCCTTTTTAGCATCA AAATATGACTTTTATATAGTTGTTCCAACTTCCAATCAAAAGATTATGATCAATATAAATTTTGCTGAAGCAACATTTCT AAATAAAGCTAAGCAGCTCTTGCATAAGAACTATGGTAGTGCTTCTATGAAATGCATATATTATGAGTTAGTGAGTATCC AACACACACATAGCTTGTCCACATATGATTCTGTTCATTGTTCATTAATTAGTAAGCCATAGACTATTGTGATTCTGTTC ATTGTTCATTAATTTGTGCAGTGTGTCCACATAGCTTGTGCCATTATTGATTTATTTATAATATGTTGAAAGGATACTGG TTTTGATTGGAACCAGTTATAGGTAATAGGTAATACTATTACTAAAAAGGCAAAGGAAACAAATTATAAAAGCTTAAGCA AAATATAAAGTCAATTTTGGCACGGTATTTTAATTTGAACACTCTTTATCTAAAGATATAAAGAAATTAAATATTTTCAC TAGAGTCAGAATGACCAAAGATATTGCTATCAAGTGTTGTAGGCGTGCCAGCTGTTCTTCTGGTATTAGTATGTGACTTA CATGTTGTGTTTTGATATTTGATTTTTGCACCGCCATCTACTGTTTATTGGCTAACTGAGATTCAAGTGTCTATGTGCTG TCTCATTATTCCTCAATATTCACATAGTATAATCAACAACCTTCAATAAATTAACTCAAGTTGTTATCAAAAAATAAATT AACTCAAGTTGCTGGGATCAGCTTGTGCTTTATTGGAGATATTAAAATGGTTCAAGTAATAGACTTGTGAATTTGGCTCA CATCCCGGCACAACTTAACTCGTCTTCAATTTAGGTTGGTCAAAATCCATAACATGCAAATTTCAAGTTAGACTGATCTG ACTAATCCAACCTGTAGGTCGAGTGGGTTCACACTCGATTTGTTTTATAGATTTTTTGCTAAAAACCAACGAGCCAACTC GCGGTCGGTCGAGCCGGATTGGTCCAACTCACTTTCCTGGCAACTTGTGACAAGTCAACCCAGATGGGTCTCGTTGATCC ATTTTGACTGCTCGACCATTACCAAAGGATCACTCAACTTGAGTGGTCGCCCAGACAAGCTCTAGGATTCAATACATTTG GCAACAAGTTTGGGTAATGATAGAAAAGTAAATATAAAATCATTTGTGTCTTTTATCTAGACGCGTAAGTTTTTCAGATA GTTGGTTCCAAGTGGTCTATATAGTTCAATTCTTAAAGTTCTCCATGTGCATTATCCAAGTTTCAAACCTCATAGAATTT GTGTTAGGCTAAACTCAATCCCAAAAGATAGTTTAATGATGAAGGTTGTTTTACCCTTTATAAAAACTATTTGGTCATAT CTTTATTCAATGTGGGACTTGATACCATTTTAGGATTTGGGTTACCCCTGACCCTATCCCTTCAATTTCTTTGAGAAAAA CATTTGTTAAAATGTGTTGACTTGATTTGGTGGGTGAATTGTTAATTGTAGATGGATAAAGCCACATTACTGGGTGAAGT TATCAGCCAAGTGAAGGAATTAAAGAAGAAAGCAGTGGAAGCAAGCAAAGGTCTTCTCATCCCAACGGATTCTGATGAAG TAAAAGTTGAACTATGCGATAATGGAGAAGAAAATGAATCCATTTCTTACATGGCAACTGTATGCAGTGATTACCAATCT GAGATACTATCTGATCTAAAACAGACACTTGATGCCCTTCAACTACAGCTTGTGAAGGCTGAACTTTCAACATTAGGAGA AAGAATGAAGAATGTGTTTGTGTTTACATGTTGCAAAAGGGAAAATGTGAACATTGAGGCATGTCAAGCTCTTGCTAGTA ATGTTCACCAGGCTCTTGGCTCTGTACTTGAAAAGGCTTCTAATGCACTCGAATTCTCGTTCAGAGCTTCAGATCGATGC AAGCGGAGAAGACTAAGCTTCATTGAATCATCTTCTTCCTCATGCAACCATGAATTTTGTTCATGCTGATGGGAACTGTT TTCGGTGTTATATACTTATGCAAAACTGGGTTTCTATTTATTCTTGAAGCAAAATTTACAATGTTATTGAACTCCAAAAA CGGCTTATATTAAAGTTGTTATTATTGTATATGTGAGGGGAGCTATTGGAGATTTGTACTACTATTATTGAGTGTAACCT CTACATGTGTGTTTGGACACATTACACATTGACACGGGTGCTCCATCGCATATGAAAGCCAAATTTACATATTATAGCAA TGCGATTTTTCTGTGTAGGGGCATGTGGTGGGTGCAAATAATCCAATTTGATAATTATCTATATGAACTTGAAGAATCAA TTTACAGGATTGGAACTTTCTGATTGTCAAGACATTGAGAAGGTAGAAGCAAAGAAAGACGCTGAAGGAAGAAACAATCT TCTTATGAGAATCCCACAGGCTTTTCTGTCAAGCCTGAAGGCATAGAAGGACCAAGTAAGGTTAGGGACTGAAAATACAT GAGATATCATCCTCCTGACCAAAACATTGGAAGCACATCAAAGGGGGTCACAACAAGATCAAGGGTCCAAGACCCAAACC TAAATGCTTTCATCACAGAAATTGAGCCAAAGAACATTGAAGAACCTCTACAAAGTGAGTAGGCCTTTATTTTGAAGCAA AACTTCTTTGCATGCCATAAATTTAGAATATGGCCTTATTTGAAGCAAATTTGGATTTGGTTGGAGACCTGGATTTAGTC AAGCAAATAGATGCAAAATGATGAAAAATAGGGTATTAATGGTCTACCTCTCCATTCACATAGCCTTGGTCAAGCACTCA CTCGGTGTCACGTCCAACATGGCCGCGATTCAAACCCTCATTGTCGAAATCCACAATTTCATCTTATCTTTCTCTCCAAG CTACCATTGCTCTCGACCTCTCTCTCAATCTCATCTTTTATCGTGATCTAAGAATACAAATGGTATCTAATCAAATACAG ATTCAATCAGTAGAAAAAACTTAAACACGACAAGCCATTGAGAAAGTTAGGGGGAAGGAGAGGAGAAAAAAAGAAAAAGG GTCACCATTACAAAGGGACGAAGAGAGTTTTGACTTGTGCATAAGAAGTAAAGGTAGAATCTTGAAAGAGGGGTAAGTGA CCGAGAGAGGAAGAGAGTGAAGTTTTGTGTTAAGCGAGGCTTTGGCTGCAAGATGGGTACGGATAGGGAGCAATTTTGGG GATCATATTAGCTTTGGGATGTTGTGGCTCAATAGAAGAAAGAAAAAGAGAAAGAAAGAAATAGGGTCACCGTTACAAAG GGACAAAGAGTTTTGACTTGTGAGCAACAAGTAAAAGTAGAATCTTGAAAGAGGGGTAAGTGACCGAGAAAGGAAGAGAG TGAAGTTTTGTGTTGAGCGAGGCTTTGGCTGCAAGATGGGTACAAATAAGGAGAAATTGTGGGGATCATATTAGCTTTGG GATGTCGTGGCCCAGTGGCGTGGTGGTTTGGTGGCCAATGGTGGCTGACAAAAAAAAAAGAAAAAAAATAAAGGGGAATG GGGAGGTGCTAAAAGTGATTTTTTTTAAAGAGATCAAAATTGATATAAAAAGTTCACGTGATCACTTCACGACTGACTAG TCTCCCCACATGGACAATATTGGACAATGAC
CDS sequence (LotjaGi4g1v0066700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTATACTTCCTTTTGTGACAACAATTCTTCATCTGGTTTCAATCCTAATTTGCATGACGTTGGAGCTAGTAATTC CAATGGTGTTTCGCGAGGTAGGTTGTTATCATCATCGCGTTCAATGGTTTTTGAGAGTGAGAAGTGTGAGCTTGTGAAAC CCCCTGCTGCTGCAACTGCAAATAAGGTTGGAACTGGAAAGAATGAGCATTCTGAGGCGAAAGCTTTAGCTGCTTTGAAG AGCCATAGTGAAGCTGAGAGGAGGAGGAGGGAGAGAATAAATGGCCATCTTGCAACACTGCGTGGTCTTGTGCCCTCCAC TGAAAAGATGGATAAAGCCACATTACTGGGTGAAGTTATCAGCCAAGTGAAGGAATTAAAGAAGAAAGCAGTGGAAGCAA GCAAAGGTCTTCTCATCCCAACGGATTCTGATGAAGTAAAAGTTGAACTATGCGATAATGGAGAAGAAAATGAATCCATT TCTTACATGGCAACTGTATGCAGTGATTACCAATCTGAGATACTATCTGATCTAAAACAGACACTTGATGCCCTTCAACT ACAGCTTGTGAAGGCTGAACTTTCAACATTAGGAGAAAGAATGAAGAATGTGTTTGTGTTTACATGTTGCAAAAGGGAAA ATGTGAACATTGAGGCATGTCAAGCTCTTGCTAGTAATGTTCACCAGGCTCTTGGCTCTGTACTTGAAAAGGCTTCTAAT GCACTCGAATTCTCGTTCAGAGCTTCAGATCGATGCAAGCGGAGAAGACTAAGCTTCATTGAATCATCTTCTTCCTCATG CAACCATGAATTTTGTTCATGCTGA
Protein sequence (LotjaGi4g1v0066700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVYTSFCDNNSSSGFNPNLHDVGASNSNGVSRGRLLSSSRSMVFESEKCELVKPPAAATANKVGTGKNEHSEAKALAALK SHSEAERRRRERINGHLATLRGLVPSTEKMDKATLLGEVISQVKELKKKAVEASKGLLIPTDSDEVKVELCDNGEENESI SYMATVCSDYQSEILSDLKQTLDALQLQLVKAELSTLGERMKNVFVFTCCKRENVNIEACQALASNVHQALGSVLEKASN ALEFSFRASDRCKRRRLSFIESSSSSCNHEFCSC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 266 | 259 | 9.9E-98 | – | |
| PANTHER | 8 | 266 | 259 | 9.9E-98 | – | |
| Gene3D | 72 | 135 | 64 | 5.8E-15 | ||
| ProSiteProfiles | 77 | 126 | 50 | 15.567 | ||
| Pfam | 81 | 126 | 46 | 4.0E-10 | ||
| SUPERFAMILY | 81 | 130 | 50 | 4.32E-13 | ||
| SMART | 83 | 132 | 50 | 6.4E-12 | ||
| Coils | 175 | 195 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi4g1v0066700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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