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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0072100 |
| Transcript ID | LotjaGi4g1v0072100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfotransferase; TAIR: AT2G15730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06237|NOH4_RHIML Nodulation protein H; TrEMBL-Plants: tr|I1JEW1|I1JEW1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0072100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9119817..9123947) extracted from Lotus japonicus Gifu genome v1.2.
GATGTTTTGCTTGTGAAGGGTCTGAAGAATTCTACCTTGGTGTGGAGGTTGGTCGTTTTGACCTTTGCAATGGTCTGTGG TGTGTATATATGTACCATTTGTCTAAAGCAGATAGGCACTAGCAGCAAGATTGGTCTTTTAGATATCAAGGTCATCCAAA ATCCATGCCCTGAACCCAACATTGAACCTTGGGAGATTCCTTATGTGCATTATCCAAATCCTAAAACTTACAGCAGGTTA AATTTTTTGTATAGTGTTCAAATCTGAGATTTTGTTGCAGAATCTGTTTGAAAATTTTGCTGATGTTGCATCCTTTGGTG TATCTTTTTCAGGGAGGAGTGCTCTTGCCACCCTGTGCGCTATTTCGCTATTCTGTCAATGCAAAGATCTGGGAGCGGAT GGTTTGAGACGTTTTTAAATAGTCATCCTAACATAAGCTCAAATGGGGAAATCTTTTCGGTTAAGGTGAGGAGGAGTAAT GTGTCGACAATAACGGAGACTCTGGATACAATTTATAATCTAGACTGGTTGAGTAGTGCTTCAAAAAATGAGTGCACTAC TGCAGTTGGCTTGAAGTGGATGCTTAATCAGGTAAAGGTTGTTTTATGTGTTTGATTACTTGTATTGGGTTTTTGGTGTA GCCTTCAATAGGAAACTAGATTCTTTTAGCTTTTGTGGTAATAAATTTAAATGAAGTTAAGGTCAAGATGTCCTCTGAAT TACCAAAATAGAAATGAAATATAGGAAGAACAATATGATGATTCGGAATGCAATTCAGTATTTTCCTCTGAATTACCAAA ATTTGAATTGCAATTCATTACTAAAAGTGGGAGGAACATCTTATTACCTATAAGAGTGAGACCTGAAGGTTTGATTTATT TTTGGTAAGGAGCTTAGATAAGAGGGCTTGCAAGGATTGCAAGGTAATACCAAGAGAGAGCTTGGCTACACAATATAGGG TTCTGGTCATTGATGTTCATTTTAAGAGCTGTAAACAGAAAATCGACAAGTTACAAACCCAAAAACAACTGTGAGAAGGG TTGATAACATGGTCTTTTGTCCTGCGAAGAGGGGTAGAGGGAGGCCAAAAAAAACATTGGAACTTGGAAGATGCTATTGA AAATGACCTCATGGTCAATAATATCCCACAAAGTTTGGTTTTTGATCGACCTCAATAGCTTAGTGTAAGCTATATAGCCG CCCTCATTTAGTAATTAGTGGGATTAGACATTTCTTGTTGTTTGTCCGTTAGTGACCCTTTCAAGTCTAAACTGTTGCTA ATGGGAATGAGTGTATGTGTCTGCAAGTTTTTCTGTTCTTAAAGGATCCCAGAACAATGATATAAAAGGAAAAGAAGGAA TGACTCTCTCTATCTCACACACACACAGTTATGCTAACAAAATGGATGCATGCACCTTTTTCATTATTTGTGTTGAGATG TTGCTTTTATAAAGTATCAGCAACAGGATGACTTGCTGAGTTTTTCACTACCAGTTTTTCTATAATTTTGGTATGTTTTC ATGGCTTCTTCCCAGATGATTTGTGTAAGTTTACAAATGTGGCATGTGTTGATGAAGGCTTAGTGAAGATTGGAGATTTC CTTTCTGTAGTGAAATACTTTCACATAAGATTGATAGTTCTTGGAGATTTTTAAAAGTTGATAGAAAGCTCAAGAGTATA TAAAGCACTGATTTTAATGGAAGATGAAGGATCATGTTGGCCAGCTTAAAATCCATCATGACAATAGTGACTTGTGGCAG AAGCATCAGGGAGACACAAACAATGTATTACAAAAAAAGCAGCAGCCAAGAAAAAGAAAGAAACTAATAATATATGTCAA AAACATTAAACTAGAAACGTAGCCATAGATAAAATTCACCTAAAATATCGTTAATTCATTATTAGCTGTTCTAGAATCAC TTAACCAAGGACCTAATCACATACAGGAAGACATAGACAGAACAGAGAAGGAAAAAGAAAGAGAAAAAGTGAGGAATAGA TAACAAAATAGGATATACAGGACAGGGATTGGGACTTAGGTCATATAGTGATAGGGATTGACCATCCATTAAGAAATTTT ATGAGAAGAGGTATAAGGGTCATAAAGTGGGAAACTTACTAACTAACTTTGAGTCTTTGACAGTAGGTTAGTCAGGCTCT GCAATATAAGGAGAACAGTTAGAGGAGAGAGAAAATGTTGGAGAAGAGTCAGAAGACATGGAAGGGATAACGCTCAGGTC AGTAAGAATCTAAGCAAGAGAGAGTAAAGGGAACGTAGTGTATGGAGCGAGTCTCCTCTTTTTAGGCTTTATTTGGAGGG CTTATTTGAGCTTATCTAATAACATAAGCATTATGCAAGTGTTTGGGTAAGTTTAAGAAAATATCTTATGAATACCTATA AGTCACTTTGAGCTTATTTTCATATGCTTATCAGATTAGCTTATGAATAAGCACTTATACCTATCTATAAGCTATTTTGA GCTTCTCGAATAAACTTATGTTTATTGACATAGCGCTTAATTAAGTTGTTTACGTAAATGTGTCTATGCGTTGGATCAGG ATAATGTAAAGTGGGTTGTGGGATCCAACTGTTAGAAAATGCATCCACTGTTTATAATTAATAGGGTTTGCTGAATCTAT CCATTCTTGGCTAGCGGATCCGGCCCATTACCTTAGGTGGCCAGGAACACTGACAAGATTGGGCTCTTATGAGCTCAGTC AGGAACAAGTTTCATAGAAGGTGTTGTGTTTGAACAGATAAAGTTATCATTCAATTTTGGCAGTAATCTTGATTGATTCT ATTTCTCACTTTTTTACATACTGAACTATTATGTGTTGCCCATTCTTTTCAGTTGGTACTATTGTAAATTAAACTGTATT GCGCAATGTAATTAATGTGGTTCCCAATATTTGTCTTTCCTTTCTTGATATAGTTATTCAGAACATTTCTTTTTGGTCGA TAAATGGGACCAACATCTAGAAAAGGAACAAAAAAAACACCTAAGGAAGAAGCCTATCAAAACTGATAGTAGCGATATTT GCGATTAAACAATTCATTGTGCGATTTAGTCCCAAAGACAAAACGCCATACGATTCGCATCAGCGAGGCTGAAAACTGCA TCGTATCGCGATTCGAGTCTTACAATACTGGCGGTACTGATAAGTGATAACCATGATCAAAAGCAACCCCTGCAATTTGA ACTCAGTTTTTTAACAGCTGGCTTTTGTATTGGCTACACATATTGCATTTGTTTATTTGTGTATTCACTAAATATCTGAC ATGTTATTGACTTCTGTTCTCTCCATTAATTTTTTTTAGCAATCTAAGGATATCATAACATTTGTAATTTAATGCAGGGA TTGATGCAGCATCATGAACAAATTGCCGAGTACTTCAGAATACATGGTGTTTCAGTCATATTTCTTTTCAGGAGGAATCT TTTGCGCCGGATGGTTTCTCTACTTGCAAATGAATATGACCGGAATGCTAAGCTATTAAATGGGACTCACAAATCTCATG TTCACTCACCCAAGGAGGTCTCTGTCTGTACTTTGTTCTGTGCATGCATGTGTGCTACTTGTGTGTGAGCTTGAATATCC CTTGGCTGTACTTTTGCATGAGTGTTTCATCGTGACGCAAGGTGCTTAACTTAGTTGATGTACTTCATGTTAATGGATTT TCATTTTGACTTTGGTTTCAGGCAGAAATACTTGCGAAATACAAGCCCACGGTCAATTCAACATTGCTGATCGCAAACCT GAGGAAAGTGAACGAAACCACGACTAAGGCTTTGGAATATTTCAAGAGCACCCGGCACATTATCGTATACTACGAAGAAG TTGTCAAGAACCATACTGTAAGTCCCACTACCTGCTGCATGATATCTACTTTATTGCCCTTTTTCATATGCGCCTATAGT AGGCTCTTGACGATTTGATTGTCTTTCTTGGTTTCAGAAATTAACAGACGTTCAGGATTTTCTGAAGGTTCCTCGCACGG ACCTAAAGAGTAGGCAGGTAAAGATACACAAAGGATCCTTATCCAGCCAAGTTGAAAATTGGAATGATGTGAGCAAGGTA CTCACTGGGACGCCATATGAGAGTTTCCTTCATGAAGATTACCGTAGGTAA
CDS sequence (LotjaGi4g1v0072100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCTGTGGTGTGTATATATGTACCATTTGTCTAAAGCAGATAGGCACTAGCAGCAAGATTGGTCTTTTAGATATCAA GGTCATCCAAAATCCATGCCCTGAACCCAACATTGAACCTTGGGAGATTCCTTATGTGCATTATCCAAATCCTAAAACTT ACAGCAGGGAGGAGTGCTCTTGCCACCCTGTGCGCTATTTCGCTATTCTGTCAATGCAAAGATCTGGGAGCGGATGGTTT GAGACGTTTTTAAATAGTCATCCTAACATAAGCTCAAATGGGGAAATCTTTTCGGTTAAGGTGAGGAGGAGTAATGTGTC GACAATAACGGAGACTCTGGATACAATTTATAATCTAGACTGGTTGAGTAGTGCTTCAAAAAATGAGTGCACTACTGCAG TTGGCTTGAAGTGGATGCTTAATCAGGGATTGATGCAGCATCATGAACAAATTGCCGAGTACTTCAGAATACATGGTGTT TCAGTCATATTTCTTTTCAGGAGGAATCTTTTGCGCCGGATGGTTTCTCTACTTGCAAATGAATATGACCGGAATGCTAA GCTATTAAATGGGACTCACAAATCTCATGTTCACTCACCCAAGGAGGCAGAAATACTTGCGAAATACAAGCCCACGGTCA ATTCAACATTGCTGATCGCAAACCTGAGGAAAGTGAACGAAACCACGACTAAGGCTTTGGAATATTTCAAGAGCACCCGG CACATTATCGTATACTACGAAGAAGTTGTCAAGAACCATACTAAATTAACAGACGTTCAGGATTTTCTGAAGGTTCCTCG CACGGACCTAAAGAGTAGGCAGGTAAAGATACACAAAGGATCCTTATCCAGCCAAGTTGAAAATTGGAATGATGTGAGCA AGGTACTCACTGGGACGCCATATGAGAGTTTCCTTCATGAAGATTACCGTAGGTAA
Protein sequence (LotjaGi4g1v0072100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVCGVYICTICLKQIGTSSKIGLLDIKVIQNPCPEPNIEPWEIPYVHYPNPKTYSREECSCHPVRYFAILSMQRSGSGWF ETFLNSHPNISSNGEIFSVKVRRSNVSTITETLDTIYNLDWLSSASKNECTTAVGLKWMLNQGLMQHHEQIAEYFRIHGV SVIFLFRRNLLRRMVSLLANEYDRNAKLLNGTHKSHVHSPKEAEILAKYKPTVNSTLLIANLRKVNETTTKALEYFKSTR HIIVYYEEVVKNHTKLTDVQDFLKVPRTDLKSRQVKIHKGSLSSQVENWNDVSKVLTGTPYESFLHEDYRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 310 | 310 | 3.1E-185 | – | |
| PANTHER | 1 | 310 | 310 | 3.1E-185 | – | |
| SUPERFAMILY | 61 | 277 | 217 | 3.0E-18 | ||
| Gene3D | 63 | 294 | 232 | 9.7E-26 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0072100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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