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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0072100 |
| Transcript ID | LotjaGi4g1v0072100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfotransferase; TAIR: AT2G15730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06237|NOH4_RHIML Nodulation protein H; TrEMBL-Plants: tr|A0A0R0J6A9|A0A0R0J6A9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0072100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9119817..9124215) extracted from Lotus japonicus Gifu genome v1.2.
CATGAGGTGAAAGATTCTATTTTTGATTTTGTTTTTTCATGGGGTGGCACGTGAATATGTCCGATCTGGTTTCTTTAAAA AAAACTCAATGAATGTGTGTGTTTTGTAGGTCAATGGGTGTTACTGTATTAGGCTTTTTGATTTGCTGGTTTTTATTAAG ATGCTGATTCTGTGGGGTTAACATTATTCATGTGCTGGGTCAACCAAGTTGAGACCTTTGTTTTGTCGTTAATAAATCGA TTTTTAATGTTCTAGTTCATGGTTTCAGGATGTTTTGCTTGTGAAGGGTCTGAAGAATTCTACCTTGGTGTGGAGGTTGG TCGTTTTGACCTTTGCAATGGTCTGTGGTGTGTATATATGTACCATTTGTCTAAAGCAGATAGGCACTAGCAGCAAGATT GGTCTTTTAGATATCAAGGTCATCCAAAATCCATGCCCTGAACCCAACATTGAACCTTGGGAGATTCCTTATGTGCATTA TCCAAATCCTAAAACTTACAGCAGGTTAAATTTTTTGTATAGTGTTCAAATCTGAGATTTTGTTGCAGAATCTGTTTGAA AATTTTGCTGATGTTGCATCCTTTGGTGTATCTTTTTCAGGGAGGAGTGCTCTTGCCACCCTGTGCGCTATTTCGCTATT CTGTCAATGCAAAGATCTGGGAGCGGATGGTTTGAGACGTTTTTAAATAGTCATCCTAACATAAGCTCAAATGGGGAAAT CTTTTCGGTTAAGGTGAGGAGGAGTAATGTGTCGACAATAACGGAGACTCTGGATACAATTTATAATCTAGACTGGTTGA GTAGTGCTTCAAAAAATGAGTGCACTACTGCAGTTGGCTTGAAGTGGATGCTTAATCAGGTAAAGGTTGTTTTATGTGTT TGATTACTTGTATTGGGTTTTTGGTGTAGCCTTCAATAGGAAACTAGATTCTTTTAGCTTTTGTGGTAATAAATTTAAAT GAAGTTAAGGTCAAGATGTCCTCTGAATTACCAAAATAGAAATGAAATATAGGAAGAACAATATGATGATTCGGAATGCA ATTCAGTATTTTCCTCTGAATTACCAAAATTTGAATTGCAATTCATTACTAAAAGTGGGAGGAACATCTTATTACCTATA AGAGTGAGACCTGAAGGTTTGATTTATTTTTGGTAAGGAGCTTAGATAAGAGGGCTTGCAAGGATTGCAAGGTAATACCA AGAGAGAGCTTGGCTACACAATATAGGGTTCTGGTCATTGATGTTCATTTTAAGAGCTGTAAACAGAAAATCGACAAGTT ACAAACCCAAAAACAACTGTGAGAAGGGTTGATAACATGGTCTTTTGTCCTGCGAAGAGGGGTAGAGGGAGGCCAAAAAA AACATTGGAACTTGGAAGATGCTATTGAAAATGACCTCATGGTCAATAATATCCCACAAAGTTTGGTTTTTGATCGACCT CAATAGCTTAGTGTAAGCTATATAGCCGCCCTCATTTAGTAATTAGTGGGATTAGACATTTCTTGTTGTTTGTCCGTTAG TGACCCTTTCAAGTCTAAACTGTTGCTAATGGGAATGAGTGTATGTGTCTGCAAGTTTTTCTGTTCTTAAAGGATCCCAG AACAATGATATAAAAGGAAAAGAAGGAATGACTCTCTCTATCTCACACACACACAGTTATGCTAACAAAATGGATGCATG CACCTTTTTCATTATTTGTGTTGAGATGTTGCTTTTATAAAGTATCAGCAACAGGATGACTTGCTGAGTTTTTCACTACC AGTTTTTCTATAATTTTGGTATGTTTTCATGGCTTCTTCCCAGATGATTTGTGTAAGTTTACAAATGTGGCATGTGTTGA TGAAGGCTTAGTGAAGATTGGAGATTTCCTTTCTGTAGTGAAATACTTTCACATAAGATTGATAGTTCTTGGAGATTTTT AAAAGTTGATAGAAAGCTCAAGAGTATATAAAGCACTGATTTTAATGGAAGATGAAGGATCATGTTGGCCAGCTTAAAAT CCATCATGACAATAGTGACTTGTGGCAGAAGCATCAGGGAGACACAAACAATGTATTACAAAAAAAGCAGCAGCCAAGAA AAAGAAAGAAACTAATAATATATGTCAAAAACATTAAACTAGAAACGTAGCCATAGATAAAATTCACCTAAAATATCGTT AATTCATTATTAGCTGTTCTAGAATCACTTAACCAAGGACCTAATCACATACAGGAAGACATAGACAGAACAGAGAAGGA AAAAGAAAGAGAAAAAGTGAGGAATAGATAACAAAATAGGATATACAGGACAGGGATTGGGACTTAGGTCATATAGTGAT AGGGATTGACCATCCATTAAGAAATTTTATGAGAAGAGGTATAAGGGTCATAAAGTGGGAAACTTACTAACTAACTTTGA GTCTTTGACAGTAGGTTAGTCAGGCTCTGCAATATAAGGAGAACAGTTAGAGGAGAGAGAAAATGTTGGAGAAGAGTCAG AAGACATGGAAGGGATAACGCTCAGGTCAGTAAGAATCTAAGCAAGAGAGAGTAAAGGGAACGTAGTGTATGGAGCGAGT CTCCTCTTTTTAGGCTTTATTTGGAGGGCTTATTTGAGCTTATCTAATAACATAAGCATTATGCAAGTGTTTGGGTAAGT TTAAGAAAATATCTTATGAATACCTATAAGTCACTTTGAGCTTATTTTCATATGCTTATCAGATTAGCTTATGAATAAGC ACTTATACCTATCTATAAGCTATTTTGAGCTTCTCGAATAAACTTATGTTTATTGACATAGCGCTTAATTAAGTTGTTTA CGTAAATGTGTCTATGCGTTGGATCAGGATAATGTAAAGTGGGTTGTGGGATCCAACTGTTAGAAAATGCATCCACTGTT TATAATTAATAGGGTTTGCTGAATCTATCCATTCTTGGCTAGCGGATCCGGCCCATTACCTTAGGTGGCCAGGAACACTG ACAAGATTGGGCTCTTATGAGCTCAGTCAGGAACAAGTTTCATAGAAGGTGTTGTGTTTGAACAGATAAAGTTATCATTC AATTTTGGCAGTAATCTTGATTGATTCTATTTCTCACTTTTTTACATACTGAACTATTATGTGTTGCCCATTCTTTTCAG TTGGTACTATTGTAAATTAAACTGTATTGCGCAATGTAATTAATGTGGTTCCCAATATTTGTCTTTCCTTTCTTGATATA GTTATTCAGAACATTTCTTTTTGGTCGATAAATGGGACCAACATCTAGAAAAGGAACAAAAAAAACACCTAAGGAAGAAG CCTATCAAAACTGATAGTAGCGATATTTGCGATTAAACAATTCATTGTGCGATTTAGTCCCAAAGACAAAACGCCATACG ATTCGCATCAGCGAGGCTGAAAACTGCATCGTATCGCGATTCGAGTCTTACAATACTGGCGGTACTGATAAGTGATAACC ATGATCAAAAGCAACCCCTGCAATTTGAACTCAGTTTTTTAACAGCTGGCTTTTGTATTGGCTACACATATTGCATTTGT TTATTTGTGTATTCACTAAATATCTGACATGTTATTGACTTCTGTTCTCTCCATTAATTTTTTTTAGCAATCTAAGGATA TCATAACATTTGTAATTTAATGCAGGGATTGATGCAGCATCATGAACAAATTGCCGAGTACTTCAGAATACATGGTGTTT CAGTCATATTTCTTTTCAGGAGGAATCTTTTGCGCCGGATGGTTTCTCTACTTGCAAATGAATATGACCGGAATGCTAAG CTATTAAATGGGACTCACAAATCTCATGTTCACTCACCCAAGGAGGTCTCTGTCTGTACTTTGTTCTGTGCATGCATGTG TGCTACTTGTGTGTGAGCTTGAATATCCCTTGGCTGTACTTTTGCATGAGTGTTTCATCGTGACGCAAGGTGCTTAACTT AGTTGATGTACTTCATGTTAATGGATTTTCATTTTGACTTTGGTTTCAGGCAGAAATACTTGCGAAATACAAGCCCACGG TCAATTCAACATTGCTGATCGCAAACCTGAGGAAAGTGAACGAAACCACGACTAAGGCTTTGGAATATTTCAAGAGCACC CGGCACATTATCGTATACTACGAAGAAGTTGTCAAGAACCATACTGTAAGTCCCACTACCTGCTGCATGATATCTACTTT ATTGCCCTTTTTCATATGCGCCTATAGTAGGCTCTTGACGATTTGATTGTCTTTCTTGGTTTCAGAAATTAACAGACGTT CAGGATTTTCTGAAGGTTCCTCGCACGGACCTAAAGAGTAGGCAGGTAAAGATACACAAAGGATCCTTATCCAGCCAAGT TGAAAATTGGAATGATGTGAGCAAGGTACTCACTGGGACGCCATATGAGAGTTTCCTTCATGAAGATTACCGTAGGTAA
CDS sequence (LotjaGi4g1v0072100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCTGTGGTGTGTATATATGTACCATTTGTCTAAAGCAGATAGGCACTAGCAGCAAGATTGGTCTTTTAGATATCAA GGTCATCCAAAATCCATGCCCTGAACCCAACATTGAACCTTGGGAGATTCCTTATGTGCATTATCCAAATCCTAAAACTT ACAGCAGGGAGGAGTGCTCTTGCCACCCTGTGCGCTATTTCGCTATTCTGTCAATGCAAAGATCTGGGAGCGGATGGTTT GAGACGTTTTTAAATAGTCATCCTAACATAAGCTCAAATGGGGAAATCTTTTCGGTTAAGGGATTGATGCAGCATCATGA ACAAATTGCCGAGTACTTCAGAATACATGGTGTTTCAGTCATATTTCTTTTCAGGAGGAATCTTTTGCGCCGGATGGTTT CTCTACTTGCAAATGAATATGACCGGAATGCTAAGCTATTAAATGGGACTCACAAATCTCATGTTCACTCACCCAAGGAG GCAGAAATACTTGCGAAATACAAGCCCACGGTCAATTCAACATTGCTGATCGCAAACCTGAGGAAAGTGAACGAAACCAC GACTAAGGCTTTGGAATATTTCAAGAGCACCCGGCACATTATCGTATACTACGAAGAAGTTGTCAAGAACCATACTAAAT TAACAGACGTTCAGGATTTTCTGAAGGTTCCTCGCACGGACCTAAAGAGTAGGCAGGTAAAGATACACAAAGGATCCTTA TCCAGCCAAGTTGAAAATTGGAATGATGTGAGCAAGGTACTCACTGGGACGCCATATGAGAGTTTCCTTCATGAAGATTA CCGTAGGTAA
Protein sequence (LotjaGi4g1v0072100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVCGVYICTICLKQIGTSSKIGLLDIKVIQNPCPEPNIEPWEIPYVHYPNPKTYSREECSCHPVRYFAILSMQRSGSGWF ETFLNSHPNISSNGEIFSVKGLMQHHEQIAEYFRIHGVSVIFLFRRNLLRRMVSLLANEYDRNAKLLNGTHKSHVHSPKE AEILAKYKPTVNSTLLIANLRKVNETTTKALEYFKSTRHIIVYYEEVVKNHTKLTDVQDFLKVPRTDLKSRQVKIHKGSL SSQVENWNDVSKVLTGTPYESFLHEDYRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 100 | 100 | 2.2E-142 | – | |
| PANTHER | 1 | 100 | 100 | 2.2E-142 | – | |
| SUPERFAMILY | 30 | 263 | 234 | 1.56E-15 | ||
| Gene3D | 63 | 252 | 190 | 7.8E-18 | – | |
| PANTHER | 100 | 268 | 169 | 2.2E-142 | – | |
| PANTHER | 100 | 268 | 169 | 2.2E-142 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0072100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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