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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0072700 |
| Transcript ID | LotjaGi4g1v0072700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cyclin-dependent kinase inhibitor family protein; TAIR: AT1G49620.1 Cyclin-dependent kinase inhibitor family protein; Swiss-Prot: sp|Q94CL9|KRP7_ARATH Cyclin-dependent kinase inhibitor 7; TrEMBL-Plants: tr|V7CEB0|V7CEB0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0072700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9188686..9191076) extracted from Lotus japonicus Gifu genome v1.2.
GATCACCCTCTTTTTAAGCTCACTCCACCTCGCTCTCTCACACTCTCTCTCAGCTCCACCCATCTGAAAATAGCAAAACT CCACAGAGAGAGAAAGAAGAAGAGAATGAGTGATTGTAAACGCAGTGCTTCAACAATTGCAGCAATGGAGGAGGATTATG TATCTTCTTCTAGTGGACCTACCATCTCTAAGAAAAGGAAAACCACTCCTTCCAACTCCCATTGTTTCCTCATTGAATTT CCTCACATATCGCCTGAAACTTCCTTGAATTCCGCCGGCACGGTGGTTTCCGGTGAGTCTTGCTTGGATCGCTCTCCGCT CTCTTCCTGCTGCAGCTCCAGCCATGTTGCTGATACCGGTGAATCCGTTAAGACCGCGCCGTTAGATCTGGAGGTATGTC TCTCCAAACTGAAATCATTAACCAACTCTCAAAAAATTTCTATTTATTTTTTCTTACTTGAATTGCTGTGTTTTTTTTAC ATCGAAAATATAAATTACATCCGTCAGGGATCGATATCCTTGACTTTCTCATCTCCAACTCATATGTCACCCAGCTCTTA CGACTCGAGCTATGGACTTAATTACCTCCTTTAATTAACCTATTTATTTTAATTTATTTGTAGTAATTTATTGACATTGG TGAATTTATGTGATCCTGCAGGTGCAAACCAAGGGTTTCGAAACTGTAGACTCAACGAATCACAATTTGAAGTCATTCAG GTTCATCATGTGTAAATTTTCCTCCATTTTCATTCTGAAACTGTAGACTCAACGCCACTTTCTTTTTTTGTTCCTTCCAT TTTCTTTGTTCAGTTTGTTGAGGGAATTTTCTGGAGACTCAGAAGAATTGGTGTTTCCAGAGAAATATTCAGCGGCGGTG AGCGAGCTTCGGAAAATGAAGAAGACACCACCAATGGCGGAGATTGAAGAATTCTTTGCAACCACCGAAAGAAACGAGCA AAAGCGCTTTGCAGAGAAGTGAGTGTTATAACAAAGAGCTTATAGTGTTTTTTTGTGTGGCACTGGATAAGGAATGCGAC CCCGCTCGCATTCTGTCAGTGCCATAATCGAACCCTAATTAACTAACAGTTTTTCCATGTGGTAGGTACAACTTTGATAT TGTTAGAGATATGCCGTTGGAGGGTCGATACCAGTGGGTTCGTTTACATTAAATGCAATGAATAAGAGAGATCGAGTGAA AGAGTTAGAGAAAGAGAAAGTGTTTGTGTGTTGGTTATGGATGATGGAGGGGGTAATAGAGGTGAGAGGAGTTTGTAGAG TTTTGAAATTTCTCTCTTCTATCTGGTCTTCACTCATTTTTTCTTTTTCTTTTTATCTCTTTGTTTTGTTCCTATCACAT CACCTATCATATTCATTTCGTGCCTTATTTCTTCTTTTATATCTCGGCGGAAGTGGGATTGAAACGTGAAAGTAAGTTTT TCTAAGTTTGAAGGGAGAGTTGGTGTTGAACACTGATGGTGATGGATGATGAAGCTAACTTGACATGGTAAAATGGAAAT TGACAGTGTAACTTCTGGTAGAGATGCTGGTGATGGAAAGGCTACAATTTTTGTACAGCTAACTCTTTTCTCTTTTCACA TGTTGGATATAACAAGCTGGCTTTTCTGCTACAACACAATCTCCCTACTCATAGATAGAATAAATAGAAGTGTAGAGGTC CTTTTTCAGCTGATGATGATGAAGAAAAAGAGGAAGAAATATAAAAAAAGAGCATAGAAATTCCCACACGGAATTGGTGT CCTTATGTTTGGAATTTGCAATTGAGATCGTCTCTTTCAGTGTTCCCAGTACAATAAGGGGTTCAGCTAATTCTTAGGGC TGTTTTCATTGTTCAGTTTTAGAAGAATTCATGGATAGAAAACCAGTTGTTATTTGGTAATTTTTCTATGAAAAAGTGTC TTTTGTTCGAGCTTTCTTCTTGGCTCCACGTTTCCCTTTTAGCTTTCCGCGGCTTTAATTGCATTTTTTGCTTTAAGTAA GGAGTTCTTTTTTATCTTTAAGCCATTTTGGAATATCCTTACGATCCCAAGCAATGATTCTCCTGTTCTGTGTGGGGACT GGGGACCATGTGCCTGGCGCATAAAGAAATGACTCCATTAATCTAATCAAGTCTTCCTTATCTCTTATAGCATATTGAAT CAATGGAAAATTTTTAAATCTTACCTTCTCAATTTCACCGATTTTCAAATGCTCTCGTGAATAACCTTCTTGATGGAGAT CTCCTGATGCTATTATGTACGAGTGGGTCTGTATTAGTCTTTCCAACATGTTATCTGATAATATAGATGTGCTTTCTCTT AGAAGCTATATATTCATATTTCGTTGTCAAACTGTTTACTTAATGGTGCAAAACATGAGAATGAGCAAATT
CDS sequence (LotjaGi4g1v0072700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGATTGTAAACGCAGTGCTTCAACAATTGCAGCAATGGAGGAGGATTATGTATCTTCTTCTAGTGGACCTACCAT CTCTAAGAAAAGGAAAACCACTCCTTCCAACTCCCATTGTTTCCTCATTGAATTTCCTCACATATCGCCTGAAACTTCCT TGAATTCCGCCGGCACGGTGGTTTCCGGTGAGTCTTGCTTGGATCGCTCTCCGCTCTCTTCCTGCTGCAGCTCCAGCCAT GTTGCTGATACCGGTGAATCCGTTAAGACCGCGCCGTTAGATCTGGAGGTGCAAACCAAGGGTTTCGAAACTGTAGACTC AACGAATCACAATTTGAAGTCATTCAGTTTGTTGAGGGAATTTTCTGGAGACTCAGAAGAATTGGTGTTTCCAGAGAAAT ATTCAGCGGCGGTGAGCGAGCTTCGGAAAATGAAGAAGACACCACCAATGGCGGAGATTGAAGAATTCTTTGCAACCACC GAAAGAAACGAGCAAAAGCGCTTTGCAGAGAAGTACAACTTTGATATTGTTAGAGATATGCCGTTGGAGGGTCGATACCA GTGGGTTCGTTTACATTAA
Protein sequence (LotjaGi4g1v0072700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDCKRSASTIAAMEEDYVSSSSGPTISKKRKTTPSNSHCFLIEFPHISPETSLNSAGTVVSGESCLDRSPLSSCCSSSH VADTGESVKTAPLDLEVQTKGFETVDSTNHNLKSFSLLREFSGDSEELVFPEKYSAAVSELRKMKKTPPMAEIEEFFATT ERNEQKRFAEKYNFDIVRDMPLEGRYQWVRLH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 192 | 192 | 6.1E-28 | ||
| PANTHER | 23 | 191 | 169 | 4.1E-40 | – | |
| PANTHER | 23 | 191 | 169 | 4.1E-40 | – | |
| Gene3D | 139 | 192 | 54 | 4.6E-7 | – | |
| Pfam | 149 | 191 | 43 | 3.6E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cyclin-dependent protein serine/threonine kinase inhibitor activity | Stops, prevents or reduces the activity of a cyclin-dependent protein serine/threonine kinase. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Cell cycle arrest | A regulatory process that halts progression through the cell cycle during one of the normal phases (G1, S, G2, M). |
Expression pattern of LotjaGi4g1v0072700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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