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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0083700 |
| Transcript ID | LotjaGi4g1v0083700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DCD (Development and cell death) domain protein; TAIR: AT2G35140.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|A0A0B2PKD3|A0A0B2PKD3_GLYSO B2 protein; Found in the gene: LotjaGi4g1v0083700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:10964396..10969672) extracted from Lotus japonicus Gifu genome v1.2.
GACGCTCATAACTTCACGCAGAAACGTCTTCACCGCTTCCCACTTTCTCTCGTTCGTCTCTATCTCTCTTCTCTCTCTCT CTCTCTCTCTCTCTCTGTCCCCAAACCCAAAACCCTTTCATCTTCATCGGTATGCTCTGTTAATCTTCTTCTTCTTCTTC CATTCATCTTATCATATTTTCATTCCTTTGAATTTGTGTGTTTGTTTCTTCCTGTAACTATTTCCGTTTCGATCAGATTT TGGAGTAGCTTTTCATTCATTTTTTGTCGTAACCAGGTTTGTCGATTTCATTGTTTTTTTCTCTAGAAATAGCAATCTGG AATAAAATAATATTTATGTCACGTTTGATTGAAACTATATCAATCCGATTCAATTGAAAATCGACATTGTGTTGATTAAG ATTGAGTTTCCTGAGTATTATTTACTCCTCTGTTCATATCAGGCTTGTTAATCGGGTGCCGTAGCGGCGCAATAGTGCTA TAGCGTGGGGTTCACCGCTACTCCACTATTCACAGCTATTGTCTGCAGCAATATAGCAGACAATAGCGCTCGAAATAGCG CTTTTAGGGCTTGCCCCTATGCTACGCTATCCGCCATTAACAACCCTGGTTTATATCTGTAAATGATTATTTCTTATAGA ATTTAACAATTACTGTTAATAGTTGAAAATCGATATTGTATACAGACGAAAGCTAATTTCCTTTGTTTTTCTCGTTGGCA TACTCTAACAAGTGATTAAGAATGAGTTTCCTGAGTAATATTTATTTATTTATTGTGTTGTTGATATCCCTAAATGGTTA TATAGAATTTGACAATTACTGTTAGTAGTTGAAACTTGAGAGGTGTTTATTTATTCTATTTGACTATATTTAGACAATGC AATTGGTATTGTTTTTATTTTCAAATTTGACAGCATAGAATAGTGATGTTATCGATGGGATTCAATGGAATGCACAACAA CAATGCTCGTGGAAGAGACCCGGATTTCGGTGCGATATTTATGTCGAATAGCGGAACAAAGAGGGAATGTTTCAAGAGGA AACTATTTGGCCTTCCATCGTCTGAAATCAAGTTTGTAGAGAAGGTTAAAGCCGGGATGATTTTGTTTTTATTTGAATAT GACAAGAGACGACTTCATGGTGTCTTCAAGGCTACTTGTGATGGATCTGTCAATATTGTGCCTAATGCCTTCGCTGCTTC AGGGAAGCAATTCCCTGCTCAGGTTAGAATCCACTTACTGCAGTTTTCGAATTTCAGCGAGTCGTGCATAACATTCTTTT GATTCAACGTGCAAGAGTGCGTTTTTGTTACTTCAATTAAAATTAAAATTATGGTCTTTTGTTCTCATTAATCTTTTGCT TTAGATAGTGTGCATTTTCTTTACTTTGATTAAAATTATGGTCTCATGTTCTCATTGATCTTTTGCTTTAGGTTAAGTTC GTTCCAATTTGGTTCTGTGAGCCACTTCATGAAAAGACATTCCGGCGTGCAATCAAAGAAAATTACTTTTCAACTTACAA GTTTAACTTCGGGTTATCTGAAAAGCAGGTCTGTTCTTGTACATTGTTACTTTTTTACGAAATGAGGAAAATTTTCTTTA AGGTTTTACATCAAACTTTTTTTTTGGCTGTTGTGTAGGTCTCTGAACTTCTATACTTGTTCAGCAAGAGAAAGCTAGAA GTGGAGGCTCCTGGGAGATCCTTAACCAGAACAGAAGACTTGAAATCAGACCGGGACAAAGTAGGTAAAGTTCGAAGATC TGTTCGTCGTGAAATGCATGTTGAAACTGTTCGAAATGAGCAAAGAAGTATGAGTGATATCATTTCACCAATCTCAATGC ATAAATACCATGGAGATTCTTTGCATCACAATCGAGAAGATGAATATATTGGATTGAATAGAAGTGATATTGTTGTAAAC AAGCAAGGAAGAGCTGCTGAGCTCATGGTGGATGCTACAAATGGTTATGCTAGTGAATATTTGACATTCGAAGATGAAAG CAGATTTTCTGCACATGAGAGTGAGGATTATATTAGTATCCGTACATCTGAGTTTGCCGTGGATACTAATGGATATGTTA GTGATTATTTGACATTAAAGGATGAAAGCAGGTTTACTGTGCATGAGAACAAAGATTATATGGACATCCATTCCAGGCCA AACATCATGGGCGGATATTCCAAAAGTCTATCTGATCAAATTATTGCTCCTGGTGATCTCAGGTTATCAATTAGGGATAG GGTTATGGGTCAAGACATAAGAGAGACTGATCAGAGGATGGTACCTTCAGATGATATTCGTGGTTTACATAATTACGATG TGAATCCATCTCTCTTTTACGGAGAGCCTAGGCCAACTTCTGCAACACAAAGAGATATGAGCTGTAGGAGCAATCTTCTG TATAATGCAGATGCTCCTGATTTAAATTTCAATCAGTCATCATCTGTTGGATTTTATAGTGGTTCTAAGTCGATAATAGA CACCACTTCTCCTTTAAGAAACAGTGAAAGGAATTCATTAAATAGCCAACCACATCTCATGCTTCCAGAACTGAAAGACA TGAACAGATGGCATGATAGTGGTGGTGACTTTCTTAATTCTGTTTTATACAGTAGCAGCAGAGATTGCATGTTTTTCAAT GAGGCTCGAAATTCTGACCTGTTGGCACCAGAGTCTCGTTTACACGAAGCTTGCAATAACATTCCTTCCTTGATGCCTCC ATCAGCTCCTATCCCTCCTTCAGATATTGGGAATTCTGGCAGGGTACATGGGCCCTTTTCTTCCATGTTCTATGATAGCA AATCATCTTCAGGCAATAATATTAATCCTGTAGCATTACAAGAAAATATGAGTCATGAGATAGCACTACCAAAGAACAAT GTGATGTTTAGTCCTGATGTTCCTTGGGCAAGTGAGAGTCCTTCCCAAGTCCAATATGGTGATTCATTAAATCATGAATA TGATATTGGATCTTATCGTGATTCTCAAACTGTTAAGTCTGGTCATCCCAAGAAAAAAAGTAGTGTGTTTTCTCGTTTAT CTTTTGTGCAGGATGTTGACAAACAAGAAAATGCAAACAATGCACGGAATAAGAAACATGATTTCCATACTTCAGTTGAT GAAGTGATGGAAATGGTACGTCACAGTCAGAACCAGTGGACGACAAAAAGAATGTCAAAGCCAAGCAAGCACAGCAAGGC TGAAAGTTTGAGGAGTAGAACTCAATTAACTGGTTCAAGGAAGAAGGATGATTGCTTTGAAAATACCTTGAAGGATCTAA GTACGGATTTGACTACTGCAAGTGGAGACAAGTCGATGACAAAAAGAATGTCAAAGCCAAGCAAGCACAACAAGGCTGAA AGTTTGAGCAGTAGAACTCAATTAATTGGTTCAAGGATGAAGGATGATTGCTTTGAAAATACCTTGGAGGATCTAAGTAT GGATTGGACTACTGCAAGTGGAGAAAATTCCAATAAAATAGCTGAAGATGTATCTTTTGTGGATTTCAAGCGTCGCAGCA AAGTGAGGAAACTTAGTGATGAGACTGAGATTAGAAGTTCCGATGAGAGTGAAAAGACTGAGAATTTGGTACTTGTGCAA CCGAAGAGAAGAAAGTTGGTCCGCCCAAATTTCAACAAAAGTACAACTTCTGATGACAAGGGTGTCGATCTTGGTGCTTC TCAAAATTTACCTTTGTCACATGGGAGTTGCAATCTTATGGATGCTAGCAAAAGTGGCTGTTCTTTGCCACAAACAGAGG CAAAAATTAAAACTAGCATTTTAGCACTTTTAGCTCGTGCTGAACTGCAAAACATTATTGGTAATGCACACTCTGAAGAT AAGAATACTACTCAGGCCAGGGGACGTGTCTGCAGCGAAGGAGGAGAAAAAGCAACAGACCGTGCTCTTACTGCATTTCA TGATGGATCAGAATGCATAGAGAATGTAAAAAATACGAATGTTTTTTCTTCAGCTTCTTGCAGAGACAAGAGTTGCCATA TGAAGGAAGGTTTCTGTGCGATGGATAGCATAAAATCAGTTCCACAGGACACGGAATCATTTCATTCTATTTGTCAAGAA CATAATGGAGAGGCATCTGCTGGAAGAGGTATGAAGGAAGGTTTCTGTGCGATGGATAGCATAAAATCAGTTCCACAGGA CACGGAATCATTTTGTTCTATTTGTCAAGAACATAATGCAGAGGCATATGTTGGCAGGGGTATGAATGCTGAAGAAGAAG CACTGAAAGATGGATCTTCATATTTGCAGAACTCTGGTAATGAAAAAGCTCCAATTGAAACTCCTCATATCAATGAGGGC TTAGGTGTGATGGATAGTACGAAATCAGTATTTCCAGGCATAGAATCACTGCATTCCGTTTGTCAAGGGCACCATTTGGA TAAGATCATATGTGCTAGCAGAGGTATTAAAACTCATAATCAAAAAGCTTCAATTACAACTTGCTGTCATATCAAGGAAG GCTTAGGTAGTAATGGTAGTGTAAAATCAGTGTCTGCAAATTCGGAATCACCGCGTTCAATTTGTCAAGAACGTCATGCA GATAAGAATCATGAGATCCTACATGCTGGCGTAGGTGTTAACTCTGAAAAACGAATGCCAAAAGATGGAAGCTCCTCCTT AGCCACTGAATTTAAAGATGGATCAGACACTTCACAGTTCTCTGGCAATGACAATGCTCCAATTGAATCAGTGTCTGCAA ACTCGGAATCACTGCGTTCAATTTGTCAAGAACGTCATGCAGATAAGAATCATGAGATCCTACATGCTGGCGTAGGTGTT AGCTCTGAAAAACGAATGCCAAAAGATGGAAGCTCCTCCTTAGCCACTGAATTTAAAGATGGATCAGACACTTCACAGTT CTCTGGCAATGACAATGCTCCAATTGAACAAAAGATGGATTGAACTTTCATCGTTGGCTTGCATACACCATTCTAACTAT GTTTTGGGAGAAAATCCAGAAACATGTGAAGTTCTGGGAATTTTTGTAGACTGTACTGTGTTATTCAGGGGAGGCTGTAG TCGGTTGGAGAAAAAGTTGATATGTTCCGCAAGTCGTTTTTAGTTGAAACGTTGGAAAGAACAATGTTTTGTGGGAGTTG ATGATAGGCTTGTTTGAGACACTTTTGTAATAGATCAATTCTCCTTTCAAGTTTGAAATCTTATATTTTGTAAATGCCCG ACTTGAATATGATTCTAAAAGTATTTTTTTGGTTACATAATTCTGAAAGTATTGCAATGCAATGACCATTAACACTA
CDS sequence (LotjaGi4g1v0083700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTATCGATGGGATTCAATGGAATGCACAACAACAATGCTCGTGGAAGAGACCCGGATTTCGGTGCGATATTTATGTC GAATAGCGGAACAAAGAGGGAATGTTTCAAGAGGAAACTATTTGGCCTTCCATCGTCTGAAATCAAGTTTGTAGAGAAGG TTAAAGCCGGGATGATTTTGTTTTTATTTGAATATGACAAGAGACGACTTCATGGTGTCTTCAAGGCTACTTGTGATGGA TCTGTCAATATTGTGCCTAATGCCTTCGCTGCTTCAGGGAAGCAATTCCCTGCTCAGGTTAAGTTCGTTCCAATTTGGTT CTGTGAGCCACTTCATGAAAAGACATTCCGGCGTGCAATCAAAGAAAATTACTTTTCAACTTACAAGTTTAACTTCGGGT TATCTGAAAAGCAGGTCTCTGAACTTCTATACTTGTTCAGCAAGAGAAAGCTAGAAGTGGAGGCTCCTGGGAGATCCTTA ACCAGAACAGAAGACTTGAAATCAGACCGGGACAAAGTAGGTAAAGTTCGAAGATCTGTTCGTCGTGAAATGCATGTTGA AACTGTTCGAAATGAGCAAAGAAGTATGAGTGATATCATTTCACCAATCTCAATGCATAAATACCATGGAGATTCTTTGC ATCACAATCGAGAAGATGAATATATTGGATTGAATAGAAGTGATATTGTTGTAAACAAGCAAGGAAGAGCTGCTGAGCTC ATGGTGGATGCTACAAATGGTTATGCTAGTGAATATTTGACATTCGAAGATGAAAGCAGATTTTCTGCACATGAGAGTGA GGATTATATTAGTATCCGTACATCTGAGTTTGCCGTGGATACTAATGGATATGTTAGTGATTATTTGACATTAAAGGATG AAAGCAGGTTTACTGTGCATGAGAACAAAGATTATATGGACATCCATTCCAGGCCAAACATCATGGGCGGATATTCCAAA AGTCTATCTGATCAAATTATTGCTCCTGGTGATCTCAGGTTATCAATTAGGGATAGGGTTATGGGTCAAGACATAAGAGA GACTGATCAGAGGATGGTACCTTCAGATGATATTCGTGGTTTACATAATTACGATGTGAATCCATCTCTCTTTTACGGAG AGCCTAGGCCAACTTCTGCAACACAAAGAGATATGAGCTGTAGGAGCAATCTTCTGTATAATGCAGATGCTCCTGATTTA AATTTCAATCAGTCATCATCTGTTGGATTTTATAGTGGTTCTAAGTCGATAATAGACACCACTTCTCCTTTAAGAAACAG TGAAAGGAATTCATTAAATAGCCAACCACATCTCATGCTTCCAGAACTGAAAGACATGAACAGATGGCATGATAGTGGTG GTGACTTTCTTAATTCTGTTTTATACAGTAGCAGCAGAGATTGCATGTTTTTCAATGAGGCTCGAAATTCTGACCTGTTG GCACCAGAGTCTCGTTTACACGAAGCTTGCAATAACATTCCTTCCTTGATGCCTCCATCAGCTCCTATCCCTCCTTCAGA TATTGGGAATTCTGGCAGGGTACATGGGCCCTTTTCTTCCATGTTCTATGATAGCAAATCATCTTCAGGCAATAATATTA ATCCTGTAGCATTACAAGAAAATATGAGTCATGAGATAGCACTACCAAAGAACAATGTGATGTTTAGTCCTGATGTTCCT TGGGCAAGTGAGAGTCCTTCCCAAGTCCAATATGGTGATTCATTAAATCATGAATATGATATTGGATCTTATCGTGATTC TCAAACTGTTAAGTCTGGTCATCCCAAGAAAAAAAGTAGTGTGTTTTCTCGTTTATCTTTTGTGCAGGATGTTGACAAAC AAGAAAATGCAAACAATGCACGGAATAAGAAACATGATTTCCATACTTCAGTTGATGAAGTGATGGAAATGGTACGTCAC AGTCAGAACCAGTGGACGACAAAAAGAATGTCAAAGCCAAGCAAGCACAGCAAGGCTGAAAGTTTGAGGAGTAGAACTCA ATTAACTGGTTCAAGGAAGAAGGATGATTGCTTTGAAAATACCTTGAAGGATCTAAGTACGGATTTGACTACTGCAAGTG GAGACAAGTCGATGACAAAAAGAATGTCAAAGCCAAGCAAGCACAACAAGGCTGAAAGTTTGAGCAGTAGAACTCAATTA ATTGGTTCAAGGATGAAGGATGATTGCTTTGAAAATACCTTGGAGGATCTAAGTATGGATTGGACTACTGCAAGTGGAGA AAATTCCAATAAAATAGCTGAAGATGTATCTTTTGTGGATTTCAAGCGTCGCAGCAAAGTGAGGAAACTTAGTGATGAGA CTGAGATTAGAAGTTCCGATGAGAGTGAAAAGACTGAGAATTTGGTACTTGTGCAACCGAAGAGAAGAAAGTTGGTCCGC CCAAATTTCAACAAAAGTACAACTTCTGATGACAAGGGTGTCGATCTTGGTGCTTCTCAAAATTTACCTTTGTCACATGG GAGTTGCAATCTTATGGATGCTAGCAAAAGTGGCTGTTCTTTGCCACAAACAGAGGCAAAAATTAAAACTAGCATTTTAG CACTTTTAGCTCGTGCTGAACTGCAAAACATTATTGGTAATGCACACTCTGAAGATAAGAATACTACTCAGGCCAGGGGA CGTGTCTGCAGCGAAGGAGGAGAAAAAGCAACAGACCGTGCTCTTACTGCATTTCATGATGGATCAGAATGCATAGAGAA TGTAAAAAATACGAATGTTTTTTCTTCAGCTTCTTGCAGAGACAAGAGTTGCCATATGAAGGAAGGTTTCTGTGCGATGG ATAGCATAAAATCAGTTCCACAGGACACGGAATCATTTCATTCTATTTGTCAAGAACATAATGGAGAGGCATCTGCTGGA AGAGGTATGAAGGAAGGTTTCTGTGCGATGGATAGCATAAAATCAGTTCCACAGGACACGGAATCATTTTGTTCTATTTG TCAAGAACATAATGCAGAGGCATATGTTGGCAGGGGTATGAATGCTGAAGAAGAAGCACTGAAAGATGGATCTTCATATT TGCAGAACTCTGGTAATGAAAAAGCTCCAATTGAAACTCCTCATATCAATGAGGGCTTAGGTGTGATGGATAGTACGAAA TCAGTATTTCCAGGCATAGAATCACTGCATTCCGTTTGTCAAGGGCACCATTTGGATAAGATCATATGTGCTAGCAGAGG TATTAAAACTCATAATCAAAAAGCTTCAATTACAACTTGCTGTCATATCAAGGAAGGCTTAGGTAGTAATGGTAGTGTAA AATCAGTGTCTGCAAATTCGGAATCACCGCGTTCAATTTGTCAAGAACGTCATGCAGATAAGAATCATGAGATCCTACAT GCTGGCGTAGGTGTTAACTCTGAAAAACGAATGCCAAAAGATGGAAGCTCCTCCTTAGCCACTGAATTTAAAGATGGATC AGACACTTCACAGTTCTCTGGCAATGACAATGCTCCAATTGAATCAGTGTCTGCAAACTCGGAATCACTGCGTTCAATTT GTCAAGAACGTCATGCAGATAAGAATCATGAGATCCTACATGCTGGCGTAGGTGTTAGCTCTGAAAAACGAATGCCAAAA GATGGAAGCTCCTCCTTAGCCACTGAATTTAAAGATGGATCAGACACTTCACAGTTCTCTGGCAATGACAATGCTCCAAT TGAACAAAAGATGGATTGA
Protein sequence (LotjaGi4g1v0083700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSMGFNGMHNNNARGRDPDFGAIFMSNSGTKRECFKRKLFGLPSSEIKFVEKVKAGMILFLFEYDKRRLHGVFKATCDG SVNIVPNAFAASGKQFPAQVKFVPIWFCEPLHEKTFRRAIKENYFSTYKFNFGLSEKQVSELLYLFSKRKLEVEAPGRSL TRTEDLKSDRDKVGKVRRSVRREMHVETVRNEQRSMSDIISPISMHKYHGDSLHHNREDEYIGLNRSDIVVNKQGRAAEL MVDATNGYASEYLTFEDESRFSAHESEDYISIRTSEFAVDTNGYVSDYLTLKDESRFTVHENKDYMDIHSRPNIMGGYSK SLSDQIIAPGDLRLSIRDRVMGQDIRETDQRMVPSDDIRGLHNYDVNPSLFYGEPRPTSATQRDMSCRSNLLYNADAPDL NFNQSSSVGFYSGSKSIIDTTSPLRNSERNSLNSQPHLMLPELKDMNRWHDSGGDFLNSVLYSSSRDCMFFNEARNSDLL APESRLHEACNNIPSLMPPSAPIPPSDIGNSGRVHGPFSSMFYDSKSSSGNNINPVALQENMSHEIALPKNNVMFSPDVP WASESPSQVQYGDSLNHEYDIGSYRDSQTVKSGHPKKKSSVFSRLSFVQDVDKQENANNARNKKHDFHTSVDEVMEMVRH SQNQWTTKRMSKPSKHSKAESLRSRTQLTGSRKKDDCFENTLKDLSTDLTTASGDKSMTKRMSKPSKHNKAESLSSRTQL IGSRMKDDCFENTLEDLSMDWTTASGENSNKIAEDVSFVDFKRRSKVRKLSDETEIRSSDESEKTENLVLVQPKRRKLVR PNFNKSTTSDDKGVDLGASQNLPLSHGSCNLMDASKSGCSLPQTEAKIKTSILALLARAELQNIIGNAHSEDKNTTQARG RVCSEGGEKATDRALTAFHDGSECIENVKNTNVFSSASCRDKSCHMKEGFCAMDSIKSVPQDTESFHSICQEHNGEASAG RGMKEGFCAMDSIKSVPQDTESFCSICQEHNAEAYVGRGMNAEEEALKDGSSYLQNSGNEKAPIETPHINEGLGVMDSTK SVFPGIESLHSVCQGHHLDKIICASRGIKTHNQKASITTCCHIKEGLGSNGSVKSVSANSESPRSICQERHADKNHEILH AGVGVNSEKRMPKDGSSSLATEFKDGSDTSQFSGNDNAPIESVSANSESLRSICQERHADKNHEILHAGVGVSSEKRMPK DGSSSLATEFKDGSDTSQFSGNDNAPIEQKMD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 1123 | 1115 | 3.2E-182 | – | |
| PANTHER | 9 | 1123 | 1115 | 3.2E-182 | – | |
| ProSiteProfiles | 18 | 148 | 131 | 61.819 | ||
| SMART | 18 | 148 | 131 | 5.3E-62 | ||
| Pfam | 22 | 146 | 125 | 6.7E-48 | ||
| MobiDBLite | 640 | 673 | 34 | - | – | |
| MobiDBLite | 653 | 673 | 21 | - | – | |
| MobiDBLite | 688 | 718 | 31 | - | – | |
| MobiDBLite | 1092 | 1232 | 141 | - | – | |
| MobiDBLite | 1140 | 1172 | 33 | - | – | |
| MobiDBLite | 1207 | 1225 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0083700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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