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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0090700 |
| Transcript ID | LotjaGi4g1v0090700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | myb-like protein X; TAIR: AT2G22795.2 hypothetical protein; TrEMBL-Plants: tr|G7JFA7|G7JFA7_MEDTR Transmembrane protein, putative; Found in the gene: LotjaGi4g1v0090700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:12014555..12018358) extracted from Lotus japonicus Gifu genome v1.2.
GCAACCTGACGGTGCTCCTTAATTTTTTTCCAATTTCGTGCTGCATCCATTTTAGCATTCACACTTTTAGTTTTGAGTCA CAAAACAGTTACATAAATAAATAAATTGATCTTTGCATATAAAACTTTAGACATACATATAAATTGTTTCAGCATAATAA TGTAGAGCAAATAGTCAGTAGAGCTTCTTAAACATTTAGTTAAAGTTTGATTATTGAACCGTGCATATAGAAAACATTTG TTCAGAGATATTTAACTATTTAATATGATTTTCGAGTTTCGAGAATTAGTCTCATGACTGTCGAGGGGATATGATACCTT GCTAAACAAAATATATATAAATATATAAAGTTGTTTGAGATCTATGATACAGTTTGTATAAATAAATGAGAGATGCAAAA AATGATTATTCTAAAAGAATCTGCTTCGTGATCAGATCCAGGTAGAAGATAGAAACTTCAAAACCCAGTTTCTGTGAATG TTAGTTACCTTCCCATTCATTCTTCTAATTCTTAGTGCGGAGGAAGACCGTGCTTCTTGTCTCTTTACAAGCATTGATTT CTCCTCTACTCAAGAAATCTATATTTGAACACTGAATCTGCAGCCTCAGTTTGCTGCCACGTATGTAATCTATATTTGCA TTTGCTAATGATGTTGAATTTAGATCTGTGTTGATGTGTTAATGCTTGCATTTGAACATGCCATGATTCAGCATTTGTTT TAATTTTTGTTTCTGGCTTGACACATGATAATGTTCTGTTCTTGATCTGGATTTGGCTACATGTTACCATTGTGTTATGC TGCTTGCTTTCTCTTATTTATGAGCTTTGTCATTAATTTCAAAATGAAGGAGTTTTAATTTTCATTCATAAGATTGCTGA GTAAGTAGGTTGCAGAAGTGGCCTTGTTTTTCTGTTTTTGTATACTTTGGATGATATGAAATAATATCTCTATTTCAACT TCTACAAATATTATTTTATTAATCACAGTATCAATATGTAGAACAATCTAAGAATTATATGTGGATATTGAATTGGCAGA TTTTCTGATAGAAATTGGTTTTCATAAAGGCAGGTCTGGGAAAGAAGAAGTGAATTTTGGAGTCTGAGGAATATTCAGCT ATGTTCAGGCTATCTCCCAGGAGGAGTCAAAGATCCAAAGGCTTCAAGGTGAAGCATGCTCTACAAATATGTGTTCTGCT TGGAGTTTGTATCTGGCTGGTTTACCAGATCAAACACACGAATGAGAAGAAAGCGTCTTATGGAGAAAGCGCAAAAACTG GCAATGATGTTGTCAGGTTAGGGAGGAAGGACCTGAATCCTCTTGTGGAGGAAACTACTGTCGTGGATGCGAGACACAAG GAGCAGGACGAGGAGAGTGAACATGAAAGCAAGACTGAAGAGCAAATTAATCTGGATGAGGTTAATAGTGTGGATGAGAA TGAACCAGAACACAAGCCTGAAGAAGAGCATATCAAACTGGATGATGCTAATGGTGTGGATGAGAATGAAGTAGAAAACA AGCCTGAAGAGCATATCAAACTGGATGATGCTAATGGTGTGGATGAGAACTCTGAGCATAGTCAGGATTTAGTGGAACAT GAGGGTGAAGGAAGTTCTGAAAATGCTAGGACAGACATTGAAAGTGAACAGCATGTAGAGAAAGTTGGTGAAGAGAGTGA CAATACGGAGAGCAAGGAGAATGATAGTTTAGTGAAGGAGAATGAAGAGAACAAACATGAAGCGGAGAACAAAGAAGCTG CAGAAGTTCATGAGGAAAAGAGTCAACAAGAGAATGAAGAGACTAAAGATAAGGAGAATGAAGAGATAAAAAATGAAGTG GAGGATACGGAAGCTGGAGAAGTTAAAGTGGAAAAGAGTCAGCAAGAGAATGAAGAGACCAAAGATAAGGAGAATGAAGA GATCAAAAATGAAGTGGAAGACAAGGAAGCTGGAGAAGTTAAAGAGGAAAAGAGTCAGCAAGAGAATGAAGAGACTAAAG ATAAGGAGAATGAAGAGATCAAAAATGAAGTGGAGGACAAGGAAGCTGGAGAAGTTAAAGAGGAAAAGAGTCGGCAAGAG AATGAAGAGACTAAAGATAAGGAGAATGAAGAGATCAACCAGAATGGAACTGATGTGAAGGATCACGTGGAGGAAAATCA TGAGCAAGATAGTAAGGAAGAGAAGGAGGAGAGCAATGGAACTGAGGCAGAGAAAGAAGAGCAAGGTAAGATTCAGGAAG AGGCTTCATCTGAAAAACAAGTCCAAGATGGTGAAGGGAACAATGAGCAGCATAGAGAGGAAAATTATGCAGGAGATAAC GCTTCTAGTGCTGTAGACCATAAATCGCAAGATATCTTCAATGAAAGTTATAACAAGACAGAACAAGTTGACAAAAATGA AAAGAATGAGTCTGAGATGGAATCTCAGAAAAGTGGTACTGAAACTAATGAAGTGACTGATTCTAATGCCACAACAAACA TCCAAGAAAATGGTGGGGAGAATCAGGCACAGACAGATAATGGTTCAGAGAAGAGTTCCACATCAGAGTCAGGTGGACAA CAGCATCAAGAGCAGAATAACCCCACTAGTGATGGTGTAGAAACTGTGGATTCATCCTCGCAGAATGGGAATGAGACAAC ATCTCATACAACTGATAAACAGAATGAAACTTCAGAAGATGCAAACTCCAAAGTAGAGGACTCCAGCACTGACACTACAA CGCCAAAAACGGAAGATTCTAATGCAGATGCAGCTGGGGATGATGTTGATTCCACTTACAAATCTTCCTCAGGAAACAGT GACAGCAATGCAAATAATGGTGCATATAAGGAGACTACTAATTTGGTTCAAAATGAAAATCCGAATGGCAATTCTGTCCA AGAAGGAAAACAAGATGCTAGCCATGAGGCTCAGCTCACTGCCTCTGATACTTCCTCAGAACAAAAGAAAGATGAATCCT CAAATGCAGAAACTAATACTGATTCTGTGCAGAATGACAATGTCAACTCTGATGGAAGCAATACAAACAGTGAGGGAAGT GCTAATGACAACAAAGAAGCTAGCCAGGTTAATTCCTCCGATGTTTCATCTGAAGAAAGCAAAGAGGGATCCTCGAACTC AGAAAACAGCAGTGATGCTAACCAGAATGGCTCAAACAGCAATGAAAATGACAATGGGAATGCTAGCCATGATGCCAATG AGAATGAGAACTCTGTTCAGAGAAAAACAAGTGAAAATGATGGTGAAGCTGCTCAAAATGAATCAGTGGAGTCAGAAAAG GCAAAGGATGAATCTGCACACTCTGATGAAGGTAGCAATTCCAACACCAATGATCAAGGAAGTTCTTCTGATCCTTCAAT CACTGAGGAAGTTAAGGAATCTCATATAGATTTGGGAACTTTGCCAGAATCCAATGCAGAAAGCAATCACAGGGATGTTT CTTCTGCAGAGTGATAATTTTAAATTAATTCATTGTATCCTATAATTGCTTCCTCTGATCCTACTTTCTTTTCTTATTTT TATCATTTTTGTTGAGCCATGTATTGTTGTTTACATAGCTAATATGGTATCAAGGTTTTTGTTTCCACAAGAATTTAGAA AGGTCTAGTATATTGTTAGTATAAGAAACATTTGTTGTTCTTCATATGTAACCAGTGCCCTTTTATGGGAGAAATAATTA TCACTCCAAAATATCATCAAAGTGAAGTTCTCTTTAGTGTTTACGAGTGTTGCTAGCATTTCTCTATTATACAATTTGCG CTGTTTCCTTTAAGCATTCATTGAATGAACCAACTGTGCTTTTG
CDS sequence (LotjaGi4g1v0090700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCAGGCTATCTCCCAGGAGGAGTCAAAGATCCAAAGGCTTCAAGGTGAAGCATGCTCTACAAATATGTGTTCTGCT TGGAGTTTGTATCTGGCTGGTTTACCAGATCAAACACACGAATGAGAAGAAAGCGTCTTATGGAGAAAGCGCAAAAACTG GCAATGATGTTGTCAGGTTAGGGAGGAAGGACCTGAATCCTCTTGTGGAGGAAACTACTGTCGTGGATGCGAGACACAAG GAGCAGGACGAGGAGAGTGAACATGAAAGCAAGACTGAAGAGCAAATTAATCTGGATGAGGTTAATAGTGTGGATGAGAA TGAACCAGAACACAAGCCTGAAGAAGAGCATATCAAACTGGATGATGCTAATGGTGTGGATGAGAATGAAGTAGAAAACA AGCCTGAAGAGCATATCAAACTGGATGATGCTAATGGTGTGGATGAGAACTCTGAGCATAGTCAGGATTTAGTGGAACAT GAGGGTGAAGGAAGTTCTGAAAATGCTAGGACAGACATTGAAAGTGAACAGCATGTAGAGAAAGTTGGTGAAGAGAGTGA CAATACGGAGAGCAAGGAGAATGATAGTTTAGTGAAGGAGAATGAAGAGAACAAACATGAAGCGGAGAACAAAGAAGCTG CAGAAGTTCATGAGGAAAAGAGTCAACAAGAGAATGAAGAGACTAAAGATAAGGAGAATGAAGAGATAAAAAATGAAGTG GAGGATACGGAAGCTGGAGAAGTTAAAGTGGAAAAGAGTCAGCAAGAGAATGAAGAGACCAAAGATAAGGAGAATGAAGA GATCAAAAATGAAGTGGAAGACAAGGAAGCTGGAGAAGTTAAAGAGGAAAAGAGTCAGCAAGAGAATGAAGAGACTAAAG ATAAGGAGAATGAAGAGATCAAAAATGAAGTGGAGGACAAGGAAGCTGGAGAAGTTAAAGAGGAAAAGAGTCGGCAAGAG AATGAAGAGACTAAAGATAAGGAGAATGAAGAGATCAACCAGAATGGAACTGATGTGAAGGATCACGTGGAGGAAAATCA TGAGCAAGATAGTAAGGAAGAGAAGGAGGAGAGCAATGGAACTGAGGCAGAGAAAGAAGAGCAAGGTAAGATTCAGGAAG AGGCTTCATCTGAAAAACAAGTCCAAGATGGTGAAGGGAACAATGAGCAGCATAGAGAGGAAAATTATGCAGGAGATAAC GCTTCTAGTGCTGTAGACCATAAATCGCAAGATATCTTCAATGAAAGTTATAACAAGACAGAACAAGTTGACAAAAATGA AAAGAATGAGTCTGAGATGGAATCTCAGAAAAGTGGTACTGAAACTAATGAAGTGACTGATTCTAATGCCACAACAAACA TCCAAGAAAATGGTGGGGAGAATCAGGCACAGACAGATAATGGTTCAGAGAAGAGTTCCACATCAGAGTCAGGTGGACAA CAGCATCAAGAGCAGAATAACCCCACTAGTGATGGTGTAGAAACTGTGGATTCATCCTCGCAGAATGGGAATGAGACAAC ATCTCATACAACTGATAAACAGAATGAAACTTCAGAAGATGCAAACTCCAAAGTAGAGGACTCCAGCACTGACACTACAA CGCCAAAAACGGAAGATTCTAATGCAGATGCAGCTGGGGATGATGTTGATTCCACTTACAAATCTTCCTCAGGAAACAGT GACAGCAATGCAAATAATGGTGCATATAAGGAGACTACTAATTTGGTTCAAAATGAAAATCCGAATGGCAATTCTGTCCA AGAAGGAAAACAAGATGCTAGCCATGAGGCTCAGCTCACTGCCTCTGATACTTCCTCAGAACAAAAGAAAGATGAATCCT CAAATGCAGAAACTAATACTGATTCTGTGCAGAATGACAATGTCAACTCTGATGGAAGCAATACAAACAGTGAGGGAAGT GCTAATGACAACAAAGAAGCTAGCCAGGTTAATTCCTCCGATGTTTCATCTGAAGAAAGCAAAGAGGGATCCTCGAACTC AGAAAACAGCAGTGATGCTAACCAGAATGGCTCAAACAGCAATGAAAATGACAATGGGAATGCTAGCCATGATGCCAATG AGAATGAGAACTCTGTTCAGAGAAAAACAAGTGAAAATGATGGTGAAGCTGCTCAAAATGAATCAGTGGAGTCAGAAAAG GCAAAGGATGAATCTGCACACTCTGATGAAGGTAGCAATTCCAACACCAATGATCAAGGAAGTTCTTCTGATCCTTCAAT CACTGAGGAAGTTAAGGAATCTCATATAGATTTGGGAACTTTGCCAGAATCCAATGCAGAAAGCAATCACAGGGATGTTT CTTCTGCAGAGTGA
Protein sequence (LotjaGi4g1v0090700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFRLSPRRSQRSKGFKVKHALQICVLLGVCIWLVYQIKHTNEKKASYGESAKTGNDVVRLGRKDLNPLVEETTVVDARHK EQDEESEHESKTEEQINLDEVNSVDENEPEHKPEEEHIKLDDANGVDENEVENKPEEHIKLDDANGVDENSEHSQDLVEH EGEGSSENARTDIESEQHVEKVGEESDNTESKENDSLVKENEENKHEAENKEAAEVHEEKSQQENEETKDKENEEIKNEV EDTEAGEVKVEKSQQENEETKDKENEEIKNEVEDKEAGEVKEEKSQQENEETKDKENEEIKNEVEDKEAGEVKEEKSRQE NEETKDKENEEINQNGTDVKDHVEENHEQDSKEEKEESNGTEAEKEEQGKIQEEASSEKQVQDGEGNNEQHREENYAGDN ASSAVDHKSQDIFNESYNKTEQVDKNEKNESEMESQKSGTETNEVTDSNATTNIQENGGENQAQTDNGSEKSSTSESGGQ QHQEQNNPTSDGVETVDSSSQNGNETTSHTTDKQNETSEDANSKVEDSSTDTTTPKTEDSNADAAGDDVDSTYKSSSGNS DSNANNGAYKETTNLVQNENPNGNSVQEGKQDASHEAQLTASDTSSEQKKDESSNAETNTDSVQNDNVNSDGSNTNSEGS ANDNKEASQVNSSDVSSEESKEGSSNSENSSDANQNGSNSNENDNGNASHDANENENSVQRKTSENDGEAAQNESVESEK AKDESAHSDEGSNSNTNDQGSSSDPSITEEVKESHIDLGTLPESNAESNHRDVSSAE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 112 | 112 | 9.2E-198 | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 112 | 112 | 9.2E-198 | – | |
| TMHMM | 20 | 37 | 18 | - | – | |
| Phobius | 20 | 37 | 18 | - | – | |
| Phobius | 38 | 777 | 740 | - | – | |
| MobiDBLite | 69 | 777 | 709 | - | – | |
| MobiDBLite | 73 | 396 | 324 | - | – | |
| PANTHER | 111 | 276 | 166 | 9.2E-198 | – | |
| PANTHER | 111 | 276 | 166 | 9.2E-198 | – | |
| Coils | 194 | 242 | 49 | - | – | |
| Coils | 250 | 322 | 73 | - | – | |
| PANTHER | 280 | 777 | 498 | 9.2E-198 | – | |
| PANTHER | 280 | 777 | 498 | 9.2E-198 | – | |
| Coils | 344 | 364 | 21 | - | – | |
| MobiDBLite | 412 | 437 | 26 | - | – | |
| MobiDBLite | 438 | 511 | 74 | - | – | |
| MobiDBLite | 512 | 526 | 15 | - | – | |
| MobiDBLite | 550 | 604 | 55 | - | – | |
| MobiDBLite | 617 | 694 | 78 | - | – | |
| MobiDBLite | 713 | 729 | 17 | - | – | |
| MobiDBLite | 730 | 747 | 18 | - | – | |
| MobiDBLite | 761 | 777 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0090700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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