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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0091900 |
| Transcript ID | LotjaGi4g1v0091900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transmembrane protein, putative; TAIR: AT3G49720.1 transmembrane protein; Swiss-Prot: sp|Q9M2Y6|Y3972_ARATH Uncharacterized protein At3g49720; TrEMBL-Plants: tr|I3S0V6|I3S0V6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0091900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:12235562..12239913) extracted from Lotus japonicus Gifu genome v1.2.
GCGAGTGAGTAGTGCGATTTGCCAAACCACAACGCGTCTCAGATCTGTTCTCTGCTTAATGTAATCATTTCCGCTCCATT TTTCTTATTACACTTAGATCTCACAACAGACAGACAGACACAACTATTTATGAATGTGATCTAAATTCTAAGGTTCTTGT TTCCATCTTCATCAATCATCTTTCATTCTTCATCTTTCTGAATTAACAAGAACAAGAAGAAGTAATGTCACGAAGGCAAC CCAGTTCCACGAGACGTCCTGGTGGTGGTGGAACCTTTCCACTTTCAGGACTCTTGAATTCCAAATCTAAATCTTCTCCT CTGTTATCAGTAACCCTTCTCCTTTTGGTAATTTCATTTAATTTCTACATCTTTTATATTTTTTCTTATTTTCATGCAAA ATGGGTAATTATTAATTAATCATTTTCAATTTTGGTTGAAAACATCACAGGGAGCTGTCTTTCTCATCATTTATGCTTTT GGTGGATCAGGTAACAAGATTTTATACAGTTTGTTTCTCTTCAATGGATCAACAGATTTATATGCAGTGAAAACATATTT CTTATTACTTTTTACCAGCACCAAATGTAAGTAACATAAAGTTATACTTATAGCTTGTTTGGAAATTTTTCTAAGTGCAT GTTTCGAAATGAGTTTGGGTACCGCGTTTTCTTTTTTGATCCACGTTTAGTCGAAGCAACAATGTGTAGCTTTTACAAAC TTCACATGATTGTTTGGTTTTTTAATGCGCAAACAATCGATCTAGATTCTAAAACCAAAATCAATTATGAGGAGAAGTTT TTATGCGTAGTTTTTACAGACTTCACACGATTGTTGGTATTTTAATGCGGAAACAAACGATTTAGATTCTAAAACCAAAA TCAATTATGAGGAGAAGCTTTTATGCGTAGTTTCTGGGTTCTAGGATCATTTGTGAGAAAAAATAAGGGTATACAAGCAT GCTATATTGTCTTGTTGCTTTTAAATCTGTCTGTTGTGAACATTCATTAATTAGAGGAAGAAAGAGTGCTGTTTAATCTT ATATTTTCCAATGAACAGGTCTATTTGGAGGAAGAAAGGATGGGGTTAGCAGGGTTGAAGGTAAGGATGTGACCATGTTT TCAGAATGTTATTGAGACTGCTTTATGTGAAATTATTGGTTGTTTTATAGCTGCTTTTGTTTCGAGAAGCCATTACACTT GACCAAAAGCATTAAAATTTCCCTTGCCCAGGAAGTTACTTGGAAACAATGCTAATACAAATTTCAACAAGTTCCATGCA TTGACATATTGTTTTAGGAAACAATTGGACAATAATACAGTGATTAACCACACTCTTCAGTCTTTAAATCAAGACGCACC AAGGGAACATGAAAAATCTTCTTGATATGAACCATATGAGCTGAAGGCTGACTCCGTGAGCCACTCATCTTTCTTGATTA TAGAAACTACTATGGTTTTTAGTACTCTTTGTTGGTTTTCTAGCATTTTGTTGCTTCAATTAAGAAAGGAGAAACTAGCT TCTGTATCTGGGTTTATATCAGTATTGTCATCTAAGCATCTGATTGTATAAATTTGTTATCCTACTAGTATTAAAGACTC CCTTGGTTAGGTGCTTCTTCCAGACATGGTTCATTTTTATTTCCTGAAGAGAATGAATTGGTAAGATGACTAGAAAGGCT AGTTACTCAATCTGTCATAGAGCAATCTCTTGCAATTGCTGATGCAGCTGCATGAAGTTGACCATAAAAAGTTTATAAGG GTCTTTCTCGTTCCGCCTTTGCAGTGCATAGCTTGTGTTTACATTGTTAAATGCCTAGTATTGTTCTAAGTCAAGTTGAT TGTGAAGTTTTGAAGCAGAAGACAAGTATATTAACATGAGAGTGGAGGATGCCTAGAGATTATGAAGTTGGAACATATTT TTCAATTTTCTGTATAATAGATTTGCAAACATCATGCAAAATTTTAGTACAAAAACTCTGAATAAGATCCATTTTATTTG GACCAATTTCAAATCAGGGAGGTTTTCTGTCTTTCTACTCTTTCCCTTCCTCCTTTTTCTATTTATTTGCTTTGTTCCTC TGCAAAATTTTAGGATGAAGAAATTGTCTTTATGCCCCCCATACCACAACTATTAAGATTTTGACCACTCCTGGTCATAA CATCTGAACCTTAAACTATATTCTAATTAGCAACTATTAGTTTAATTGTGACCACTATTAAGATTTTACCTCAACTATAG TTTAATTAGCAAAAATGAAGTTTTTCTATCACGTGCTTTGTCTTGTAAATGGAAACAACTAGTTAAACATTACTCATTAA CAAATTTCAAATTTGTTTTATCTTGTTGGTAGGTGATTTTTCATGCACATCTGAAGTGCAAAGTGCAATTCCTGTTTTGA AGAAGGCTTATGGTGGCAACATGAAAAATGTTTTGCATGTAGGCCCTGAGAGTTGCTCAGTGGTCTCCAAATTAATAAAA GAAGGGGAAACTGAAGCATGGGGTGTGGATCCATATGAAATAGAAGACGCTGATAGGAACTGCAAGGCTCTAATGCATAA AGGCATTGTACGCGTTGCAGATATAAAATTCCCTCTACCATACAGGGAAAAGTCTTTTTCTCACGTTATAGTATCGGATG CTTTGGATTACCTGTCTCCAAAATATTTGAACAAAACTCTTCCTGAACTAGTAAGAGTATCTGCTGATGGTGTTGTTATT TTCACAGGTACTTCACTTTCTAAGTAAATATGATCTTTCTAACACTGATAAACATGAATGCAGCTTTTTACCAGCTAATT AGATTTCTATTCAAGAGTACTATTCTTTTCCCCATGTTTTGGTTGTGTGCTACATCTTTCAATGATTTCAACCTTATGTT GATTTTAGTACACCTTCATAAATAGGTTTTTCAAATTCAAGGATTAGTTTTATATGGGAATTTGTATGAAAATTCATATC CAAGTTTTTCACCTATTACCAAACTGACTCTTGAATAATGTTTTTCTTGCTAGCGTTATTTCTATTTTACTTGACCTTGC TTTAATTTGGTTCCTTCCTGCCTTTTTAGGTTACCCTGGTCAACGGAGAGCTAAAGTAGCTCAATTATCCAAATTCGGCC GCCCGGTGAGTGGCCTTCTCCGGCTGGTTATATATTACTCTTCGCTACTGATTGGACTGCAATCGTTTCCTGCATATGAT CCAAATATATTTTCATTCATTAAAATCCCATCTACCCTAAACAATAGAAATTGTCAAGATATAACCATGTTTTCATTTGT CCTTTCAAATTATGTTTACAAAACTGATCATAATATGATAAAAGTAGCATAAAATCTGGGCAGTAAGGACCGACATATAT CATTTTCCTAACCATTGTTAACTCACTATATCCTTTGGTACCAATTTGCGATGATGAGAAATCTTCTAGCAGTTAGATTC TGCAAGATAATTAACCTTTGACAAAGCATATGCATTATTTACTATTACTGACAATTCTGATTAGGCAAGCTGGAATACCC TATAATCTTGATTCTTGGGTAACATAAGAAATGGAACAACATTAATAGATTGTATTATAAATAATAATTATGTTTTTATT GTTTTAGAAGATCATTTTCTTATCATTTCTGAGTGCTGACGATAACAATATCTGCTTCATATCTAAAGGCTAAAATGCGG AGTTCATCATCGTGGAAACAAATTTTCGCTGAAGCAAGCTTAGAAGAAAACGAAGCTTCTGTCAAGAAGTTTGAGGAAGC TGCATCAAAGATGTCCTACGCACCAAGCTGCCAAATTTTCCACCTCAGTTCATAGTATACCATTAATAATTTATTATTCA CCGTTTGGTATTTTTTTGTATTCCTATAGACATGAGTATAATTTCATCTATCAGGCAATTCTGTTTTACCAGTACATGCA CAAGCATTAAGATGCATGCTTGCTAAAGCAATAGGCAAAATTAAAAGTAACTTATTTTTGGATGGCTGAAAGGTTTGTCC CATCAAACATTCAAGCTATAGTATTTGAGGCAAAAAATGACACTTTCGATATGATCATGTATATGCTAGTTTTATCAGTT TGAAAATTTAATGAATATTCCTATTATTCTAGTCTGACGGGTGAATCGGGTGACATACTAAGCACATATAGTGCGTTGAG AGGTATGTTCAAAAGAATGTGTTAGTATCATTTCTCACTCAAATGATAAATAGAGATGATTTGAATGATTTTAAGAAATG ATTGTGGTGCATGAATTGACCTAAGCTTGGGCAACAAAACCTGCATCCTCTTATCTACCTAAATATAACCATAAACTAGC ACTAATACATGTTGGCTCAATTAGTAAGAATG
CDS sequence (LotjaGi4g1v0091900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCACGAAGGCAACCCAGTTCCACGAGACGTCCTGGTGGTGGTGGAACCTTTCCACTTTCAGGACTCTTGAATTCCAA ATCTAAATCTTCTCCTCTGTTATCAGTAACCCTTCTCCTTTTGGGAGCTGTCTTTCTCATCATTTATGCTTTTGGTGGAT CAGGTCTATTTGGAGGAAGAAAGGATGGGGTTAGCAGGGTTGAAGGTGATTTTTCATGCACATCTGAAGTGCAAAGTGCA ATTCCTGTTTTGAAGAAGGCTTATGGTGGCAACATGAAAAATGTTTTGCATGTAGGCCCTGAGAGTTGCTCAGTGGTCTC CAAATTAATAAAAGAAGGGGAAACTGAAGCATGGGGTGTGGATCCATATGAAATAGAAGACGCTGATAGGAACTGCAAGG CTCTAATGCATAAAGGCATTGTACGCGTTGCAGATATAAAATTCCCTCTACCATACAGGGAAAAGTCTTTTTCTCACGTT ATAGTATCGGATGCTTTGGATTACCTGTCTCCAAAATATTTGAACAAAACTCTTCCTGAACTAGTAAGAGTATCTGCTGA TGGTGTTGTTATTTTCACAGGTTACCCTGGTCAACGGAGAGCTAAAGTAGCTCAATTATCCAAATTCGGCCGCCCGGCTA AAATGCGGAGTTCATCATCGTGGAAACAAATTTTCGCTGAAGCAAGCTTAGAAGAAAACGAAGCTTCTGTCAAGAAGTTT GAGGAAGCTGCATCAAAGATGTCCTACGCACCAAGCTGCCAAATTTTCCACCTCAGTTCATAG
Protein sequence (LotjaGi4g1v0091900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRRQPSSTRRPGGGGTFPLSGLLNSKSKSSPLLSVTLLLLGAVFLIIYAFGGSGLFGGRKDGVSRVEGDFSCTSEVQSA IPVLKKAYGGNMKNVLHVGPESCSVVSKLIKEGETEAWGVDPYEIEDADRNCKALMHKGIVRVADIKFPLPYREKSFSHV IVSDALDYLSPKYLNKTLPELVRVSADGVVIFTGYPGQRRAKVAQLSKFGRPAKMRSSSSWKQIFAEASLEENEASVKKF EEAASKMSYAPSCQIFHLSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 32 | 32 | - | – | |
| PANTHER | 1 | 260 | 260 | 4.8E-149 | – | |
| PANTHER | 1 | 260 | 260 | 4.8E-149 | – | |
| TMHMM | 31 | 53 | 23 | - | – | |
| Phobius | 33 | 52 | 20 | - | – | |
| Phobius | 53 | 260 | 208 | - | – | |
| Gene3D | 76 | 252 | 177 | 2.2E-10 | – | |
| SUPERFAMILY | 91 | 231 | 141 | 1.72E-7 | ||
| CDD | 94 | 195 | 102 | 0.00608022 | – | |
| Pfam | 96 | 188 | 93 | 3.2E-4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi4g1v0091900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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