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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0092000 |
| Transcript ID | LotjaGi4g1v0092000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | AP2-like ethylene-responsive transcription factor; TAIR: AT4G37750.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q38914|ANT_ARATH AP2-like ethylene-responsive transcription factor ANT; TrEMBL-Plants: tr|V7CEK3|V7CEK3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0092000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:12246755..12251157) extracted from Lotus japonicus Gifu genome v1.2.
GGGAGCGTAGTAGTAGAATAAAGCAAAAGCTAAGGTCTTTCTCATGCACGGATCCCCATGGAATTGCTGGAACGATGCCT AGCATTGCTTGCTTGAACACATTCTTTTTGTTTAGTTTAAAGGAACTTGCTTTGTTCTCTTTAGAAATGTGTCCAAATGA GACTCTTGAAACACCCCTTATATACAATACAACCACACACACCTTATAGATGCACCATGACAAAAATATTCAGCAAAAAC TAGCGAAAAAATATATATATTTTTCCAAATGGTGTGGGGGTGAGAAGGCTAGATAGAGTGTAGACTTGGTATGATTAGTT TCTTTGTTTCCCAATGATTGAGTCACCTTGCTAGATTTTCTGTTATTTGGTGAAGGAGTGTTTGGTAATGAAGACCATGG ATAATGATGATAGTGTTGATGATGTTAACAATCAAAATAACTGGTTGGGATTCTCACTCTCTCCTCAAATGAACATGGGA GTTTCTTCACAAACTCATCATCACTCTCAACCTTCTTCTGTTTCTGCTGAAGTGCTTCCACCAAGCTTTTACCACCATGC TCCTCCTCTTAGCAACTATGGCTTCTATTATGGACTTGAAGGTGAAAATGTTGGGTTGTATTCAGCTTTTCCAGTCATGC CCCTCAAATCTGATGGCTCTCTCTATGGAATGGAAGCTCTTCAAAGCAGATCACAACAAGAAGCACAAGGTTAGCACAAA AAGAGAACTTTTTTTTTATTTTGTTTTTGGTGTCAAAGAATATACTAATTGTTGATCACTTTTTTTATCTATTTTTGTGA AGCAATGGCTACTACTTCAGCACCAAAATTGGAGAATTTCTTGGGCAGTGAAGGGATGGGGACCCCTCACTATAGTGTAT CAGAAACAATGCCTCTAAGCTTAGATAGCATTTTTTACAACCAAACCTCACGCCACCAAAATAACCCAAGTTACCAAAAC CAAGTTCAACACATCAATAGCCATCAACAACAGCAAGAGCTTCATGCTCAACAGTTATCATATTACTCCACCTTGAGAAA CCATGAAGAGATGTTAGAAGTGTCCAAGCAAAGTACTCAAACTTGTGACATCAACCTCCATGTTCCAAACTTCCCAGCTA GCATTGCACAAGAGTCAAAGATGGTTGTTGCTGTGCAGGAAAATGAAGGTGAATCAATGGGATATGGGGATTTGAAGTCC TTAACATTGTCCATGAGTCCTAGCTCACAGTCAAGCTGTGTCACGAGTTCACAGCGTGCATCACCTGCTGTCACTGATTC TGTTGCCATGGAAACAAAGAAAAGAGGAGCTGAAAAGGTTGACCAGAAGCAAATTGTTCATAGGAAATCCATTGACACCT TTGGACAGAGAACATCACAGTATAGAGGTGTAACAAGGTAAGTTTTGTTCTCTTGTTTGTGTGAATGTGCGTGTTCAGAA GTCTCACATCCATTCGAGATATAATTACATAAGTTTTTACTAAGGGTATTCCAACTCTCACTTCTAATCTAACTTTTGAA GTAGAGTTAATCCTAACCCAAAGTATATTACATTATTTTGTGTTTTCTTTTTTCCTTTATCTCTAAAGGGTGTTTGTTTG TTTATCAGGCATAGATGGACTGGTAGATATGAAGCTCATCTATGGGACAATAGCTGCAAGAAAGAGGGCCAAAGCAGGAA AGGAAGACAAGGTGAGAATGAGACTATGTTCCCACAATCACTTTTCCTTTTATTTTTTCTTGTGTATTTTTTTGGGTCAA ACATGTACATCTTACTATTGTTTTTTGTCTCTTTGCCGGGAAATGCCACTCAAATATATGATGAATCTCAGTCTATCTAG GTAAGGTTTTCCTGGACCAAGATATTACACACACACACACACATTTTATTTTCAATATTTCTCAGAGCTTAGATTAACCA GACAGATAAAGATAGACATTATATACTTGACATTTTGCTTATGATGTTAACAAAAGAGGAAAATTAATGTTTATTAAAGT CATTCCAAAATGTTTATTTTAGGGGGTTATGATATGGAAGAAAAAGCTGCAAGAGCTTATGACCTGGCTGCACTCAAGTA TTGGGGTCCCTCCACACACATAAACTTCCCTGTAATAGCAAATAATTTATTTGTTTTCCCTTTTCTCTTTAAAGTTTCCA CTCATTTTTTTATGAGATCTAATTCAGTAACAGTGACTGGATAATAATCACTAACTAACAAGTTTTCTTTTTACTACATT ATTTTATTACAGTTGGAAAATTATCAAAATGAACTTGAGGGAATGAAGAATATGACTAGACAGGAATATGTTGCACATTT AAGAAGGTAAAATCCTTTCTTCCCTCTACCATCTAGAAATCTTGTCGTAAATAACCATGTTACTTGTTCATAACAACTCT CAATTTTGTCCTAATCAGAAAAAGCAGTGGTTTCTCAAGAGGGGCTTCCATGTACAGAGGAGTAACAAGGTCTCACAGGC TATCAATTACCTAATATAACATTACAATTTTAAATAATAACTAATATTTAATCTGAAAAATGAGTTTCTTTAGTTTTTTA AAACTTGATTCTTTCCGGTTCAATTGATAGCAGACACCACCAACATGGAAGGTGGCAAGCTCGGATTGGTAGGGTGGCTG GAAACAAAGATCTTTATCTTGGGACCTTCAGTGAGTATTCTTTTCCTCTTTTTTACTCATACTTAACTTCTTTTCCCTTT GAATATGCCATGAATATGTTTTTTTTTTTTTTTCATACCAAGGAGCAAGGACCATGTTTCTATAATAGGAAGAGACAGAG AGAATGCTTTATGACTTTGAAAAGCTAATCTTTGGTGCACCATAAGGTGCTTGAGCTCATCTTTTCAACAGCTAAAGGCT GTTCATGAGCCACTTAATATTGTAGATGACTGATAAAATAATCCTAGAGATAGCTTTTACTAATGTTGTTCACACAGATA GATTACACAATTATAGTGCAGATTACACAATTATAGTGCATGTTTGAAAGCATAGTAGAAAATCACGGTGAAGTTAAAAT CATGGCGAACAAAATAAAAAACTAAGGGAAGTTGTTTCTAACTACCATAAATTTTGGTTCACCGTGGTTTTCTGCTATCC GGATATATCTTCAAATCTTATCCAGTTTTCTGCCAAAAAAAGTAAAAAAAAAAACTAATCCAATGTTGTTTACCATAAAG TTCTGTTCCAATGTTAGCAGGAAAAGCTAATCATTACTTCTATTGAAACTAAAATTTCAGGTACCCAAGAGGAAGCAGCT GAAGCCTATGACATTGCTGCTATAAAATTCAGAGGAGCTAATGCTGTGACCAACTTTGATATCACAAAATATGATGTGGA AAAAATCATGGCAAGTAGCAACCTTCTTAGCAGTGAACTAGCAAGGAGGAACAGAGAGGTAGAAGGTGGTGGAACTCAGT ACATTGATCAGAAGCCTCCATCATATGATAACAATCAAGAAGCAATTTTGATGCAGAAGAGTGCTGAATCTGAAGGCCAA TCAAATCAGTGGAAGATGGTTCTGTGTCAAAATCAGAATCAACCACCAAGAACTCATGAGAGCTTCTCAGCTGTGTCTTT AGACCACATGTTTCTACATCAAGAAGTAGAGGAATCTAGTAAAGTGAGAAGCCATGTGTCAAATCCTTCTTCATTGGCCA CAAGTCTGAGTAGCTCAAGAGAAGGTAGCCCAGATAGGACAAGCATGGCACCTGTGCTTTCTGGAATAGCTTCAACAGCT GCTGCTTCAAAACTATTGGCTGCTAATCCAAATAGTAACGTCAATTCTTGGGATCCATCACATCATCTTAGGCCTGCACT TTCTTTGCCTCAGATTCCAGTTTTTGCTGCTTGGACAGATGCATAGTCCTTTTCTTTTCTTTTGTTTTTTCTCAAGTAAA ATTTCAAAGCTCTTGTTTTTTTCTTTCTGCATGCATGGAAATGGACAACACAAGAGAAAGGGTGGTGGGTTTTTAGCTAG TAAAATTGAGGGTTTAATTAATTGTTTGCAATTTTAAACTTACAAATCGTTAGATTTTAGCATTTTACTAGCAAAAATTT CCTAAATCCTCATGTCTTATGGCCTGATTTTATGGATGATTGGTTTCACAGTTTATAGGGAGTCCGAGCGACGTTTAGAT TGTTGTTGACATACAATTTAAACTACGGTAAAACACAAGTTACACTTCATAGTTTCTAATCATAAGTGATTATGAGACTT CCTATCATAGGGCCAAACAAGCTGTGAGTATTTGGTTTCGCATTGTTCATCCACAGAAGCACTTCTAATGTTCTCTAATA TGATTTTTCAACATCAGAACATATTTGGGTGAAATTCCTAGATGCACTTCATGCTGATAAAATCAAGTTGTAGCTACAAA AAG
CDS sequence (LotjaGi4g1v0092000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGACCATGGATAATGATGATAGTGTTGATGATGTTAACAATCAAAATAACTGGTTGGGATTCTCACTCTCTCCTCA AATGAACATGGGAGTTTCTTCACAAACTCATCATCACTCTCAACCTTCTTCTGTTTCTGCTGAAGTGCTTCCACCAAGCT TTTACCACCATGCTCCTCCTCTTAGCAACTATGGCTTCTATTATGGACTTGAAGGTGAAAATGTTGGGTTGTATTCAGCT TTTCCAGTCATGCCCCTCAAATCTGATGGCTCTCTCTATGGAATGGAAGCTCTTCAAAGCAGATCACAACAAGAAGCACA AGCAATGGCTACTACTTCAGCACCAAAATTGGAGAATTTCTTGGGCAGTGAAGGGATGGGGACCCCTCACTATAGTGTAT CAGAAACAATGCCTCTAAGCTTAGATAGCATTTTTTACAACCAAACCTCACGCCACCAAAATAACCCAAGTTACCAAAAC CAAGTTCAACACATCAATAGCCATCAACAACAGCAAGAGCTTCATGCTCAACAGTTATCATATTACTCCACCTTGAGAAA CCATGAAGAGATGTTAGAAGTGTCCAAGCAAAGTACTCAAACTTGTGACATCAACCTCCATGTTCCAAACTTCCCAGCTA GCATTGCACAAGAGTCAAAGATGGTTGTTGCTGTGCAGGAAAATGAAGGTGAATCAATGGGATATGGGGATTTGAAGTCC TTAACATTGTCCATGAGTCCTAGCTCACAGTCAAGCTGTGTCACGAGTTCACAGCGTGCATCACCTGCTGTCACTGATTC TGTTGCCATGGAAACAAAGAAAAGAGGAGCTGAAAAGGTTGACCAGAAGCAAATTGTTCATAGGAAATCCATTGACACCT TTGGACAGAGAACATCACAGTATAGAGGTGTAACAAGGCATAGATGGACTGGTAGATATGAAGCTCATCTATGGGACAAT AGCTGCAAGAAAGAGGGCCAAAGCAGGAAAGGAAGACAAGTCTATCTAGGGGGTTATGATATGGAAGAAAAAGCTGCAAG AGCTTATGACCTGGCTGCACTCAAGTATTGGGGTCCCTCCACACACATAAACTTCCCTTTGGAAAATTATCAAAATGAAC TTGAGGGAATGAAGAATATGACTAGACAGGAATATGTTGCACATTTAAGAAGAAAAAGCAGTGGTTTCTCAAGAGGGGCT TCCATGTACAGAGGAGTAACAAGACACCACCAACATGGAAGGTGGCAAGCTCGGATTGGTAGGGTGGCTGGAAACAAAGA TCTTTATCTTGGGACCTTCAGTACCCAAGAGGAAGCAGCTGAAGCCTATGACATTGCTGCTATAAAATTCAGAGGAGCTA ATGCTGTGACCAACTTTGATATCACAAAATATGATGTGGAAAAAATCATGGCAAGTAGCAACCTTCTTAGCAGTGAACTA GCAAGGAGGAACAGAGAGGTAGAAGGTGGTGGAACTCAGTACATTGATCAGAAGCCTCCATCATATGATAACAATCAAGA AGCAATTTTGATGCAGAAGAGTGCTGAATCTGAAGGCCAATCAAATCAGTGGAAGATGGTTCTGTGTCAAAATCAGAATC AACCACCAAGAACTCATGAGAGCTTCTCAGCTGTGTCTTTAGACCACATGTTTCTACATCAAGAAGTAGAGGAATCTAGT AAAGTGAGAAGCCATGTGTCAAATCCTTCTTCATTGGCCACAAGTCTGAGTAGCTCAAGAGAAGGTAGCCCAGATAGGAC AAGCATGGCACCTGTGCTTTCTGGAATAGCTTCAACAGCTGCTGCTTCAAAACTATTGGCTGCTAATCCAAATAGTAACG TCAATTCTTGGGATCCATCACATCATCTTAGGCCTGCACTTTCTTTGCCTCAGATTCCAGTTTTTGCTGCTTGGACAGAT GCATAG
Protein sequence (LotjaGi4g1v0092000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKTMDNDDSVDDVNNQNNWLGFSLSPQMNMGVSSQTHHHSQPSSVSAEVLPPSFYHHAPPLSNYGFYYGLEGENVGLYSA FPVMPLKSDGSLYGMEALQSRSQQEAQAMATTSAPKLENFLGSEGMGTPHYSVSETMPLSLDSIFYNQTSRHQNNPSYQN QVQHINSHQQQQELHAQQLSYYSTLRNHEEMLEVSKQSTQTCDINLHVPNFPASIAQESKMVVAVQENEGESMGYGDLKS LTLSMSPSSQSSCVTSSQRASPAVTDSVAMETKKRGAEKVDQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDN SCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEGMKNMTRQEYVAHLRRKSSGFSRGA SMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDITKYDVEKIMASSNLLSSEL ARRNREVEGGGTQYIDQKPPSYDNNQEAILMQKSAESEGQSNQWKMVLCQNQNQPPRTHESFSAVSLDHMFLHQEVEESS KVRSHVSNPSSLATSLSSSREGSPDRTSMAPVLSGIASTAAASKLLAANPNSNVNSWDPSHHLRPALSLPQIPVFAAWTD A
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 641 | 625 | 1.5E-242 | – | |
| PANTHER | 17 | 641 | 625 | 1.5E-242 | – | |
| Gene3D | 299 | 368 | 70 | 3.5E-21 | ||
| SUPERFAMILY | 299 | 368 | 70 | 1.05E-16 | ||
| Pfam | 299 | 358 | 60 | 1.6E-12 | ||
| CDD | 299 | 366 | 68 | 1.9569E-22 | ||
| ProSiteProfiles | 300 | 366 | 67 | 19.203 | ||
| SMART | 300 | 372 | 73 | 4.3E-29 | ||
| PRINTS | 301 | 312 | 12 | 2.3E-6 | ||
| CDD | 401 | 462 | 62 | 1.75576E-25 | ||
| SUPERFAMILY | 401 | 461 | 61 | 1.44E-17 | ||
| SMART | 402 | 466 | 65 | 2.4E-33 | ||
| ProSiteProfiles | 402 | 460 | 59 | 19.19 | ||
| Gene3D | 402 | 462 | 61 | 4.8E-20 | ||
| Pfam | 403 | 452 | 50 | 3.5E-9 | ||
| PRINTS | 442 | 462 | 21 | 2.3E-6 | ||
| MobiDBLite | 559 | 590 | 32 | - | – | |
| MobiDBLite | 563 | 585 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi4g1v0092000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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