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LotjaGi4g1v0095300.4

Overview

Field Value
Gene ID LotjaGi4g1v0095300
Transcript ID LotjaGi4g1v0095300.4
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Adenylyl-sulfate kinase; TAIR: AT2G14750.1 APS kinase; Swiss-Prot: sp|O49204|KAPS_CATRO Adenylyl-sulfate kinase, chloroplastic; TrEMBL-Plants: tr|A0A0L9TQH1|A0A0L9TQH1_PHAAN Adenylyl-sulfate kinase; Found in the gene: LotjaGi4g1v0095300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:12730411..12732714) extracted from Lotus japonicus Gifu genome v1.2.

TTAACATCTGGTTCATTATCTTAATAGGTCAAAGTGTCCACCAGATGTCAAATGTTGGGATGTCGACAAACATTTTGTGG CATGACTGTCCAATTCAGAAACAGGATAGACAGAAGCTGCTTCAGCAGAAAGGATGTGTTATATGGCTAACTGGCCTCAG CGGTTCAGGTTTGTGGATTTTTAGATTGATATTGTCTCTGAATGTCTACTCTTTAGTTCATTGAAATCAAGCAAAATTAT AATTCTTGTACAAGAATAGGATTCTAGTTGTGATTTAGTTTGGAGCTCTAGCTTTACGGCTTTTCTTATGTTGTCTGTTG TTTTACATTCACTGCATGAACAGAAAGTCAGAAACAGTGACAATTCGTTTTGGTATTTGCTCCTCTTCATTTGATTAATG CTAATATTATTGTATTTGGGAACAGTTGAAATGTTGCAATGTCTTGCTTCTTATGTACCCTTCTCTGTTTCTTCTCTTCA ATCTATGTGTAACCTATGGTAGATTCTTGTCAAACTTTGCTTGCTGTCCACTTAGTACTGGTTTGTTAAAATCATGTACA ACTATTAGAAGCTAAGATGCCTATGGGTATTTTTTTAATTTAATTAGCTTGATGTCTTCTTTGTATTAGTCTATACAATT TAAATTTTTTGTAATGATTTAGCGAGGTTTTGGCTGAACCAATTCATGTTTGCTATCAAATATAACTTCATAAATGAAGG ATATGAAAGCTCATGTACAGATGTCAGGATACACCATTATTTTCATTCTTCTAGATACCATTTCTGGACTCACTAGTTAT TTGATTTTAGGGAAAAGTTCTCTTGCATGCGCTTTGAGTCAAAGCTTGCACTCCAGAGGAAAACTGTCTTATGTCCTTGA TGGTGACAACATTCGGCATGGTCTGAACCGTGATCTTAGTTTTAAAGCAGAAGATCGTTCAGAAAACATACGAAGAATTG GTGAATTTCTAATTTCTGCACCTTGCAGTTATATTCTATAATTTAATAAGTGGTCATACATCTTGATTTAAAAATTTTCA GGTGAGGTGGCCAAACTCTTTGCAGATGCCGGTGTTATTTGCATCACTAGTTTAATATCCCCTTACCGAAAGGATAGAGA TGCTTGCAGAGCACTGCTGCCAAAAGGAGATTTTGTCGAGGTATGTTCTTATGGTGCTACAAATAATGCTGGTAGTTTGG CATTAGCTATTAGGGGCTTAGGGCACAATCATTGAACAATAAAATGTTCTCCATAGTTAATACATTGCTCACATGTTGTA GGTTTTCATAGACGTGCCGCTACATGTGTGTGAAGCTAGGGACCCAAAAGGCCTCTACAAGCTCGCTCGAGCTGGAAAGA TCAAAGGTATCTTGGTACAGATTTTCATATCACTGCTTGCGATCTAATTCGGCACTAAAATTATTTGCCCGTGGTGTGCC ACAATCTTTCATTACTGTATTTGTTCTTTACACATATTAGCATCAGTAGTGCAGCTACATATGTCATGCTTACTCTTTCT TCTTTCTAATCAAAATTGAGTATCATTTCTCTTAATGGGTTACAATTATTTATTTGGCATGCTGCAGGTTTCACTGGTAT AGATGATCCATATGAACCACCGTGTAGCTGTGAGGTTTGTATTCGTTGCACTGTGCTTAGTATTGTTAACGAGGAACAGG ATAGAAAAGGAAAATGATTCTTACACTAATTTTTTCATACCTTTACACTTGTTAATGATGTCTCACTTAACAAGGTTTAT GCTTTGGTTTACCAATGCAGAATCTACACATCTTATTAACCTATAATTGAGTCATCATTAACCAGCGTAACAATGGTTGA ATGGCATGCAAATAATATTACCAAATAGAAAATAAATACTTACTATTTTCATTGAAAGTTTTTAGTTCTCTTTGCTTGAA ACCCAACAAGGGAAAAAGTGTTGTCTTCTGGACAGGAGAGCTTTTTTTTACATTTTTAATTTCTTCTTCTTTTCTTTGAT TTCTCTGATATTAAATGGATGAGAAATAGCCACATAAGCTTACTACATACATCAGATGTCATAGTACCCAGCTTCATGCT TTTCCTTTGAAACTTATGCATACCTTTTATCTTTGAGATTCTAAATTATTGTTTTTCTGTTTTCCATTTAATTGATTCTA CTTTTCGTTGTCATTTGAAAAGACTCTGCCTTCTTTGTCTTGCAGATAGTGTTACAACAGAAAGGAAGTGATTGCAAGTC TCCTAATGATTTGGCTGAAATAGTGATATCTTACTTGCAGAAGAGTGGATATCTGCAGGCCTGA 

CDS sequence (LotjaGi4g1v0095300.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCAAATGTTGGGATGTCGACAAACATTTTGTGGCATGACTGTCCAATTCAGAAACAGGATAGACAGAAGCTGCTTCA GCAGAAAGGATGTGTTATATGGCTAACTGGCCTCAGCGGTTCAGGGAAAAGTTCTCTTGCATGCGCTTTGAGTCAAAGCT TGCACTCCAGAGGAAAACTGTCTTATGTCCTTGATGGTGACAACATTCGGCATGGTCTGAACCGTGATCTTAGTTTTAAA GCAGAAGATCGTTCAGAAAACATACGAAGAATTGGTGAGGTGGCCAAACTCTTTGCAGATGCCGGTGTTATTTGCATCAC TAGTTTAATATCCCCTTACCGAAAGGATAGAGATGCTTGCAGAGCACTGCTGCCAAAAGGAGATTTTGTCGAGGTTTTCA TAGACGTGCCGCTACATGTGTGTGAAGCTAGGGACCCAAAAGGCCTCTACAAGCTCGCTCGAGCTGGAAAGATCAAAGGT TTCACTGGTATAGATGATCCATATGAACCACCGTGTAGCTGTGAGATAGTGTTACAACAGAAAGGAAGTGATTGCAAGTC TCCTAATGATTTGGCTGAAATAGTGATATCTTACTTGCAGAAGAGTGGATATCTGCAGGCCTGA 

Protein sequence (LotjaGi4g1v0095300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSNVGMSTNILWHDCPIQKQDRQKLLQQKGCVIWLTGLSGSGKSSLACALSQSLHSRGKLSYVLDGDNIRHGLNRDLSFK AEDRSENIRRIGEVAKLFADAGVICITSLISPYRKDRDACRALLPKGDFVEVFIDVPLHVCEARDPKGLYKLARAGKIKG FTGIDDPYEPPCSCEIVLQQKGSDCKSPNDLAEIVISYLQKSGYLQA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 207 207 1.5E-134
PANTHER 1 207 207 1.5E-134
Gene3D 6 207 202 4.6E-84
TIGRFAM 12 193 182 6.2E-78
Hamap 28 203 176 35.82
SUPERFAMILY 28 201 174 4.94E-35
Pfam 29 182 154 1.9E-72
CDD 32 178 147 9.40017E-104

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Sulfate assimilation The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds.
Molecular function Adenylylsulfate kinase activity Catalysis of the reaction: ATP + adenylylsulfate = ADP + 3'-phosphoadenosine 5'-phosphosulfate.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0095300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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