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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0096000 |
| Transcript ID | LotjaGi4g1v0096000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT2G23070.1 Protein kinase superfamily protein; Swiss-Prot: sp|O64816|CSK2P_ARATH Casein kinase II subunit alpha-4, chloroplastic; TrEMBL-Plants: tr|A0A072UNW2|A0A072UNW2_MEDTR Casein kinase II subunit alpha-like protein; Found in the gene: LotjaGi4g1v0096000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:12861381..12865544) extracted from Lotus japonicus Gifu genome v1.2.
TTGACTCTCATTCCCAATTTAATGGCCATAAGGCCCTTCCACCACTTCAACTTGTTGTCGCGCGATAGATTGCTCTATCT CTTCCGCACGGCACAACAATTTCATTCTCCTCCTTCTTATCTTCTCCGCTCCCCCTCTTTCTCCCTCCGCCACTTCGCCG TCTCCGCCACCCCTGCTCCGCCGCAACCTCGCCGTCACCTCCCGCCGCCGCCCGACTCCATGGCGCAGAAGATTGGCAAA TCCACTCGCCGCCCTGGCGCTTCCTCCAAAGCCAGGGTTTATGCCGATGTCAACGTCGTTCGCCCTAAGGAATATTGGGA CTACGAAACCCTCACCGTTCAATGGGGGTGGGTAATCATGTTTTTCCCCCTTCAATTTTGTTATGATTTTTTGTTTTAAT TAGGTCTGATTCTGATTGATTTTCGTTTTGTTTGTGTTGTGGTTTTTGTAGGGAGCAAGATGATTATGAGGTGGTGAGGA AGGTGGGTAGGGGGAAATACAGTGAGGTATTTGAAGGTGTTCACTGCATTGATAATGAAAAATGTGTCATCAAGATCCTC AAACCTGTCAAGAAGAAGAAGGTGAGTTTTTATTGCGCGGGTGTGTGGTGGTGGTTGCTTTTATATTGGAATTTGATGAA TCAATGTGTTGTGGTATAATTATCACAGACAAATCATGTTGTATGAACCCTAAGGCATGGATTTACAATATAGAATAACA ATTTTGTTATCAGAATGAACTGGAGCTGGTTAGTGATAATAAGTTAGTTATAGGGAAAAATATTCAACCATAGAGTCCGA AACTGTGAATGCATATAGTATATGCTGTGGTTGCAGCTGGAATTTCACTTGCTGACTTGCCAAAGTGAATGTATTTTGTT TATGTTATTAGTTTGTTAGTGGAAGTGTGTATTGTTGGCCGGCTGTTGGGAGGGGATATTTTCATCTAAGTTTGCTTTCT CTTGATGAAGTCTTTAGAGTGATAGTGAAGGATGTAACATTCTTCTGGTTATAAATATATTTAACTTTGACAACTTTTCT TATTTTTAATGCAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGGCCTAATATTGTAAAGTTGCTTGAC ATTGTTAGAGACCAACAATCGAAGACCCCCAGTCTCATATTTGAATATGTCAATAACACTGATTTCAAAGTGCTTTATCC TACATTATCAGACTATGATATAAGATATTATATCTATGAACTTCTGAAGGTAAGTTTAATGCTCTCATATTTTAATGAAA ACACGAGCCTGCAACAATGAAAATTTGTCATTTTTTTCCTTAGATCTTGTTGGACACAAGATGTACCAGACTCTTCATAA CAAGGTTGATTGTTGTGCCTTTCATGATTTTCTTGTTGAATTAAATTTGCAAGTGATTAAGGTTTGAGCCATTTACTGCA TAAATTTTATGAATACTTCTGTGACTGTCTTAGTTATAGTGTAGACATTTTAGTTGGTATCTGTAGATGTGCTTTAGATG TGTAAGGAACTCATAGAACCTACTGCATCATAGTTGCTCTTGTGATGGAAGACATCACCTTGTCTTCATTATACATTAAA AGTTCAAGAACCATTTCCTTTCATTTGAAATTTCTTGTGAGTCTAATAAACCCTTCTCATCAGAATGGCTTGTATGCTCC TTTATCCATTTATTTCTCGTGAGATAATGTGGCATGTTTTCTATGCCAGTGTCTCTGGGTATGATTTTGCAACTCTTTTT TCAACCTGGAAGATTTGGTTTCTTGGTGTTCATTGCACTTTTGGTATTTTTCATCCTTTGTCATTCAATAAAGACAAATT TGATGTAGTAGGCAAATATCACTCGAATATGTCAACTGTTTCACTGAAGTACTAGAAAGTTTTGCCTGGAAGGTTTAAAT TGCAAAAGACAATGTATCTGCATATATGTCTCTTTAGTCTCTTTACGTGTTGTGCAGGTTTCAATATTATTCCATTAGTT ATATCTGCTCACATTAGTTGTATCTGCTCATATATCCTGGTTGGTGTATGTATGATTGTGATGCTTTGTTCTGTCTGTTA TCCATAATTGCAAGACAATTGTGATGCTTTGTTTGCATTAGATTATTTTACCAGTCCAGCCATTTTCAGTTTTTTGGCTA TCAAATTGGAAGCGCTAAGTTAATTGAAACTTCTGCCAGGCTCTGGACTATTGCCATTCACAAGGAATTATGCATCGGGA TGTAAAGCCGCACAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAGTTCTATC ATCCTGGGAAAGAATATAATGTTCGTGTGGCTTCAAGGTGCATTTGCCATTATATATATTTTTTTTCTTGGGAGGGGGGT TGTTTTAGGGGAGGGTTCACAATTAAGGTGTTTAGATGAGTATTATTCTCTATTGCGCTCGCACATTTTTGATTGAGTAA CAGCACTTCCTTACTTCCTTTATGCACTTGCCTTGCTTGTAGATATTTCAAAGGTCCCGAGCTTCTTGTTGATCTTCAAG ACTATGATTACTCTCTAGATTTATGGAGTCTTGGTTGTATGTTTGCTGGGATGGTAAGCAACAAACTTTCCTTTAAATGA AAATTTTCTATACTTCCACTAAAAGGTAAACCTCTGAATATTTACCCATTGCATGCTAAAGATTAATTTCTCCTTTTGAA GTTAATGTATAGGTCTGTTTACCTGAGCTTTTTTACAGATATTCCGTAAGGAGCCATTCTTTTATGGGCATGATAACTAT GATCAACTGGTCAAGATAGCTAAGGTAAGTGAAGCCTGTAAGTGGACTTGGTAGCATTTGTGCTAGATTGTCAGCTTATG GTTGATAACTCATTACTGCTTTTGCTCAGGGTCTGTGACGTTTATTTGTAACATTATGTTCCCCACTGGATATATTATTG TATGTTGTAAGTGTGCATTTTTCTTGTACCTTGTGCCAATTTCTTTCTTTCTTTCTGTTTTTTTTTTCCTCTAAAGATTT ATGATAGCTATGATCAAGTGGTCAAGATGGCTTAAGTAAGTTAAGCCTGTAAGTGGGCTTGGTGGTGTTTGTGCCAGATA GTTGTGCTGTGTGTTTGGATGATAATTGGCTACTGCTTTTACTTTTTTTTATCTGCAACCTTATGTTTCACATTGAGATT TTGCTGTGTTGCAAGTGTGTATTTTTCTAGAGTCTTGTGTCCTTTTTCTATTTTTTGGCGTTTCCTCTTCAATTATATCC CCCTTAGTGCTCCTGTGATAAAATTCTCTTGTTGTCAAGAAATGAAATGTTGTTGCCTTTTGAGAATGCCTTTGTTTTGT TACAACTTTTTCAGCTATGGATCTTGGCAGAAAATGCAGCTTCTTTGTTCATCTATTTATGTAGTACTTATTCATGCCTG TGAAAGTATTCAGAATTCTGAGTTAGATTTAGAATTGCAATTCTGTTAAAGATGTTTGCATTGTTCATATGCAGAAGCAA CTTAAACAAATATAGGGGATTGAGAATTTTAGAGTGATGACATTTTTCTTCCCTCTTGCAATAGGTACTTGGGACAGATG AATTAAGTGCATATTTAAATAAGTATCGAATAGAGTTGGACCCAAATCTTGCAGCACTTATTGGGAGGTATATTGGGGTT CTTTCGTAGTTTACTATATATGTTGCGTTTGTTAAATCAAACTATCATTATTTTAACTAATATACTCTCAACACTGACAG GCATAGCCGGAAGCCATGGGCAAAGTTCATTAATGTAGAAAATCAACACTTGGCAGTTCCTGAGGTAGTATGCATTGTAA TCATGTTTTTAATCTACCCATAATGTCATTGATTCTTGTGCTAAGTTTACACTTTTGTAAAGGCTGTGGACTTTGTTGAC AAGTTGCTACGATATGATCACCAAGAACGCCCCACTGCTAAAGAAGCCATGGTAAATTCCTGATCTTTTAGCATTTTTAT TACTGTGTTGGCTGACTTCTGATGTCAATTTTGCTACATCTGTGGCTTCCTCTCTGTACGATTCCTGCCTTGTTTGGAAT TTTGTTTTTACAATCTTTGTGGAAAAAAGTGTTGGGGCTTAAGATCATTGCACTGCAATATGATGCTTCTAACTGACCTT ATAG
CDS sequence (LotjaGi4g1v0096000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCATAAGGCCCTTCCACCACTTCAACTTGTTGTCGCGCGATAGATTGCTCTATCTCTTCCGCACGGCACAACAATT TCATTCTCCTCCTTCTTATCTTCTCCGCTCCCCCTCTTTCTCCCTCCGCCACTTCGCCGTCTCCGCCACCCCTGCTCCGC CGCAACCTCGCCGTCACCTCCCGCCGCCGCCCGACTCCATGGCGCAGAAGATTGGCAAATCCACTCGCCGCCCTGGCGCT TCCTCCAAAGCCAGGGTTTATGCCGATGTCAACGTCGTTCGCCCTAAGGAATATTGGGACTACGAAACCCTCACCGTTCA ATGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGTAGGGGGAAATACAGTGAGGTATTTGAAGGTGTTCACT GCATTGATAATGAAAAATGTGTCATCAAGATCCTCAAACCTGTCAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTA CAGAATCTTTGTGGAGGGCCTAATATTGTAAAGTTGCTTGACATTGTTAGAGACCAACAATCGAAGACCCCCAGTCTCAT ATTTGAATATGTCAATAACACTGATTTCAAAGTGCTTTATCCTACATTATCAGACTATGATATAAGATATTATATCTATG AACTTCTGAAGTGTCTCTGGCAAATTGGAAGCGCTAAGTTAATTGAAACTTCTGCCAGGCTCTGGACTATTGCCATTCAC AAGGAATTATGCATCGGGATGTAA
Protein sequence (LotjaGi4g1v0096000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIRPFHHFNLLSRDRLLYLFRTAQQFHSPPSYLLRSPSFSLRHFAVSATPAPPQPRRHLPPPPDSMAQKIGKSTRRPGA SSKARVYADVNVVRPKEYWDYETLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCIDNEKCVIKILKPVKKKKIKREIKIL QNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKCLWQIGSAKLIETSARLWTIAIH KELCIGM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 50 | 81 | 32 | - | – | |
| PANTHER | 58 | 239 | 182 | 6.4E-106 | – | |
| PANTHER | 58 | 239 | 182 | 6.4E-106 | – | |
| SUPERFAMILY | 85 | 227 | 143 | 1.02E-25 | ||
| Gene3D | 100 | 190 | 91 | 3.0E-43 | – | |
| SMART | 114 | 245 | 132 | 1.1E-4 | ||
| Pfam | 114 | 222 | 109 | 6.1E-16 | ||
| ProSiteProfiles | 114 | 247 | 134 | 16.132 | ||
| ProSitePatterns | 120 | 143 | 24 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0096000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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