Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi4g1v0096700 |
Transcript ID | LotjaGi4g1v0096700.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Peroxidase; TAIR: AT5G67400.1 root hair specific 19; Swiss-Prot: sp|Q43873|PER73_ARATH Peroxidase 73; TrEMBL-Plants: tr|I3T6L6|I3T6L6_LOTJA Peroxidase; Found in the gene: LotjaGi4g1v0096700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:13011591..13016262) extracted from Lotus japonicus Gifu genome v1.2.
CCCCACCCGTGGTCCTAACCTGAAGCATTAATTTGACAAAAATTAAAGCAAACATTTGAATGAGACGAAGGCGGCTATAG ACATAGCCAAAGCTCAACCATGTCCCTTTCAGAGCCAACCATCCTTTTCAATTATCATTCAAATAATTAACTTTCCCTTC TGTAAAAATAAAAAGCTTCTAATGACAACTGGCTGGTGAGTCGTGACCACGTCCTCTATGTGTAGCTAGCTCACAACACA TATATATATTCCCTCATACTTTTCCACTTAAACACCATCCTCATTAGTTCTCTGCTCTGTGTTTTCTTGTCTTCCTGCAA AAAAACCAGCAAAATGGGTCAGATTAATCGTGTACTTGTGCTGTCACTCTCATTAACGCTGTGTTTTTACACTTGTTTTG CTCAGCTTAGCCCAAACCACTATGCTAGTACCTGCCCCAATCTTCAAAGCATCGTTAAAGGTGTTGTTCAGAAGAAATTT CAACAAACATTTGTTACAGTTCCTGCTACCCTTCGTCTCTTCTTTCACGATTGCTTTGTTCAGGTAACTAGATCAACAAT CAATTGATTAAGTAATAATGTGAATGTGATTAATTAATGCTAATTGAAATTTAATTCTAATGTTGCTCTGTTTGGCTTTT GGTTTGCAGGGTTGTGATGCTTCTGTTATGGTGGCGTCTAGTGGGAATAACAAAGCAGAGAAGGATCACCCTGATAATCT GTCACTGGCGGGTGATGGGTTCGACACCGTGATCAAAGCGAAAGCCGCCGTGGACGCTGTTCCGCAGTGCAGGAACAAGG TTTCGTGTGCTGATATTCTCGCCTTGGCTACCCGGGATGTTGTTGTTCTGGTTTGTACTTCAATCACTCACTACTCTGTT TTTGTACTTGAGGACATAAATGAAACACATGTTTGCAAAGACTTTCATAATTAATTCTAGAGCTAAAAATCACTTATGAC AAGAAATTTATGTGACAGCATCTTCGGATGTAAGGTGGAAAACCATAGTGAAGCCAAAAATATTGCAGTTGACATGAACT AAAGCTGAGGAGAATTACTTCTGTGCATTGTGATTTTGTCGCGAACATGTTTGAATTTGATTTGTTTTGGTTAAAGTGAA TTTGATTTTAGAATTATTAATTAGAAAAAGGTAATTTAACATTGAACAAAACAAATCTTATTTGAATAGTAATATAATAA ACATAAATTATTAATATATATTAAATTTTAAAACCTTTTATTTTCGTATACACAAATTAGATTTTCTTCGCAAAAGGTTT ACATTGAAAATGTTACTTTTATGTTTAGAGACTTATAGTGCATGTTTGGAAACTCATTTTAAAATCGCAGTGAAAATAAA ATCACATTGGATAGAAGCAAACGTTAAGAAGATATATATTTTTTTTACTATAATTTTAATTTCACCATGACTTTCGAATG AGTTTGTAAACATGCATATAAATATTTAATTTTTTAATCTTGTTTGTACTTCCATTGATAGAAAAATGTTATGCACATTT ATACAACCAAATTCTTTTTTTTCCAAACAAGCTTTTCTGTTTGGGAGCATAGAACCAAAACCCAAATAAGAGATTCCTGT GATTTTGGAGTTTAGTGAGGACCTTTAGTTAATTAATTGATTAATTAGTAAATTAAATTTCATCTACAGGCTGGTGGACC TTCCTACACTGTTGAATTGGGGAGATTTGATGGGCTAGTTTCAAGAGCTTCTGATGTAAATGGGAGGCTTCCTGAGCCAA ACTTCAACTTGAACCAGCTTAATTCCCTATTTGCGTCACAAGGGCTCACCCAAACAGACATGATTGCACTCTCAGGTATT GCGTTTGCTTCTATTTATTAAATGTGTACCATTGACATATAGAAGTTCTTAATTAATTAGGTGTTTATCTTGGATATTTA TCATCTAACTTATGATAATCAAAAAAGAAAATGATGATGATTCACACAATGAAATTGTGCATATTTAAGTTATGACACGT AAGAAAATATTCCACCTGCTAAATGAGAATATAACCATCTATCTACTACCACAATTTGTTTATGTTAAATTGTACTATGA AAGAAATTAATTAATGATGGGCTAATGCGTCATACATCTAACTAACATTAGTGACATACACTAAACAAGCTTAATTTCAA CTTTTGATAGAGTTTGTGTACATTATTCTCCACCGACGTTCATGAGATCAGGCCATTTTTTTCATATTGTTATGCATTAT TACAATATCCAATAGGCATTGAGATATGTGATTTTTGTTTTTGTATTTGCTTTTGGGAACATCTAAACCGAACAAGCTGC GAGTTTAGTTTTAGAGTTTAATTTTAATATAATTACTATTCTTTTGTTCCATTAAAATTTCACTTACATAAGTAGTTTAG TTTAGTTACTCTAACGAAATGTCAAATCAATTAAATGATGTGACAACACCATTGAATTTATTAAGTATGATTTATCCCCA CTAATAATACATTAAAGTTAAAATTCTATTTCAATTCACTATATATAGAAGGAAATAAACTTGACATTAGTATCACTAGC AAATTATTTCAAAGTTTAACTATGCCAACAAACTCATAATGTGTTATATATACCTAATACGACCAACACTCAATAAGAAA TTTTCTAGCAAAATATTTATTATTATGAGTCAGGTCTCATCAAATTACTATGAACTCTATATAATTTAATTGATCTGATA TGGATTTCAACTAATAAAAAATAGCAAACTAAACTAATTAAGTGTTAGTAACACTATTGATACTAAATATTAACCAAGTT TGTATTGTAAATCTCAATAAAACATGCTCTACTCTATTATGTTCGAATTTAGATTGTGCGTTGTTAATAAGTCCAAATTT TTTTAATTATCCGATCTTTTAATGAGACGACTAAAATTATAAGATATTTCTACTATTTGATTTTGGTAAGAAATATGACT CGAATTAATCCTAATCCTACAACATAAATTTATAAATGTGTGATGTAGAAAATTAGTAAGTGCAAACACAAAATATCTTG TGACTTTTTGAAATATCACTAGCTTGACTATTCTGTTCGACACCATCTGATAAATTATTTGTGCATTGAATATAAAAAAA AAACACAATTATTTGTCAATTTTGAATTGAAATCTTATCAAGTGAGTCATGATTAATTTATGAGTTTGGTGTACACATTA TAATATGTATATCTATATTAAATTTATCGAGAACTAAGATGTCCTAACTCCTGAGAATATTCCAATCTAAATGGAAAATG GAAAATGACTTGTTCACATCAATCTATCTTTATTTAATAAAAAGATAACAGGAAGAGGAGTAAGAAAACTAAAAGATAAC AAGTGATGCGATAAAAAAAAAAAGAAAAAGAGTAACATGAGAAGAAAATGCAAGTGAAAATAAAATGGAATTGGAAATAC TGTGTAAACTTATCAGTGTTAAAGCCGAACTTCAAGCTCATTAGGTACATGCACAATGCACATGCAAAAGCAAGAAAACG AAGATTCATTCTGAAAAAATCAGAACCAAACATTGCTGTAACTTTTGTACTCTTGCGAATTTTCTTTCTCTATCAACATG CTAATTGCAACTATTTTACAGGTGCACATACCCTCGGATTCTCCCACTGCAACAGGTTCTCGAATAGAATATACAGCACC CCAGTGGACCCAACACTCAACAGGAACTACGCAACCCAGTTGCAACAAATGTGCCCCAAGAATGTGAACCCCCAGATCGC CATCAACATGGACCCTACGACTCCTCGAACATTCGACAACATTTACTACAAGAACCTTCAGCAAGGGAAGGGTCTCTTCA CCTCTGATCAGATCCTCTTCACGGATCAACGGTCCAAGGCCACCGTTAATTCATTTGCTTCTAACAGCAACACCTTCAAT GCCAACTTCGCGGCGGCCATGATCAAATTGGGTCGCGTCGGAGTTAAGACCGCCAGAAATGGGAAGATTCGTACTGATTG TTCAGTGCTTTAAATAGCATGTATTTTGTGGAGGAATGTGAGTGATGGAGAAAAATTTGCAAGTGGTAGTTAGATTATTA TTTGATGTTATTAATCGGTGAGGGATATTGAGGTGGCTTGTTTGGATTTAATGGGATGGGAGAATAAGCTTTAGTTTCTC TTTGGTGTGACGTTTCAAATAATTAGAAGTCCTCTGAATTTATGAACTCTCCCTGAATTGTTCATAAAAAATGAATAAGA GAGTGTTACCAGAAATATATATGAATGAATGAATGGATTTATTGTTTGAGCATATCCAATTTCCTTTTTAAGTCTATTAA GATAAGGGTGTTCACTAATTGAAATGGGTCCATTTTGAAGAAAAGTCTTTTGATACAACCAATTTATTGTTTCCTAAGGC ATCTTGAATTAATTGAAATGACAGATTTCGTCACCAATTATACAATTGAATTCAAAATGCAACTAATTGAAGTCAATTTA TACAATTAATTGAATTAAGAACTAGACACCACCATTTGAAATGACAAAGACAAGAGAAGAAACAAAGAGTGCGTACCAAA TATCCTAAGACAGTTTGGTCCAACTCTTTCATCTCAGCTAATAAAGCTGATATAATGTATCCAAAAACAAATGAACTAGT GCGTTCAACATAGGTAACTAAAATTGTCATGA
CDS sequence (LotjaGi4g1v0096700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCAGATTAATCGTGTACTTGTGCTGTCACTCTCATTAACGCTGTGTTTTTACACTTGTTTTGCTCAGCTTAGCCC AAACCACTATGCTAGTACCTGCCCCAATCTTCAAAGCATCGTTAAAGGTGTTGTTCAGAAGAAATTTCAACAAACATTTG TTACAGTTCCTGCTACCCTTCGTCTCTTCTTTCACGATTGCTTTGTTCAGGGTTGTGATGCTTCTGTTATGGTGGCGTCT AGTGGGAATAACAAAGCAGAGAAGGATCACCCTGATAATCTGTCACTGGCGGGTGATGGGTTCGACACCGTGATCAAAGC GAAAGCCGCCGTGGACGCTGTTCCGCAGTGCAGGAACAAGGTTTCGTGTGCTGATATTCTCGCCTTGGCTACCCGGGATG TTGTTGTTCTGGCTGGTGGACCTTCCTACACTGTTGAATTGGGGAGATTTGATGGGCTAGTTTCAAGAGCTTCTGATGTA AATGGGAGGCTTCCTGAGCCAAACTTCAACTTGAACCAGCTTAATTCCCTATTTGCGTCACAAGGGCTCACCCAAACAGA CATGATTGCACTCTCAGGTGCACATACCCTCGGATTCTCCCACTGCAACAGGTTCTCGAATAGAATATACAGCACCCCAG TGGACCCAACACTCAACAGGAACTACGCAACCCAGTTGCAACAAATGTGCCCCAAGAATGTGAACCCCCAGATCGCCATC AACATGGACCCTACGACTCCTCGAACATTCGACAACATTTACTACAAGAACCTTCAGCAAGGGAAGGGTCTCTTCACCTC TGATCAGATCCTCTTCACGGATCAACGGTCCAAGGCCACCGTTAATTCATTTGCTTCTAACAGCAACACCTTCAATGCCA ACTTCGCGGCGGCCATGATCAAATTGGGTCGCGTCGGAGTTAAGACCGCCAGAAATGGGAAGATTCGTACTGATTGTTCA GTGCTTTAA
Protein sequence (LotjaGi4g1v0096700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGQINRVLVLSLSLTLCFYTCFAQLSPNHYASTCPNLQSIVKGVVQKKFQQTFVTVPATLRLFFHDCFVQGCDASVMVAS SGNNKAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILALATRDVVVLAGGPSYTVELGRFDGLVSRASDV NGRLPEPNFNLNQLNSLFASQGLTQTDMIALSGAHTLGFSHCNRFSNRIYSTPVDPTLNRNYATQLQQMCPKNVNPQIAI NMDPTTPRTFDNIYYKNLQQGKGLFTSDQILFTDQRSKATVNSFASNSNTFNANFAAAMIKLGRVGVKTARNGKIRTDCS VL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
Phobius | 1 | 23 | 23 | - | – | |
SignalP_EUK | 1 | 23 | 23 | - | – | |
Phobius | 1 | 6 | 6 | - | – | |
PANTHER | 2 | 322 | 321 | 9.3E-175 | – | |
PANTHER | 2 | 322 | 321 | 9.3E-175 | – | |
Phobius | 7 | 18 | 12 | - | – | |
Phobius | 19 | 23 | 5 | - | – | |
ProSiteProfiles | 24 | 322 | 299 | 74.72 | ||
SUPERFAMILY | 24 | 321 | 298 | 5.3E-106 | ||
CDD | 24 | 321 | 298 | 4.86123E-170 | ||
Phobius | 24 | 322 | 299 | - | – | |
Gene3D | 29 | 320 | 292 | 1.7E-111 | – | |
PRINTS | 34 | 53 | 20 | 6.5E-57 | ||
Pfam | 42 | 287 | 246 | 1.6E-71 | ||
ProSitePatterns | 56 | 67 | 12 | - | ||
PRINTS | 56 | 70 | 15 | 3.5E-31 | ||
PRINTS | 58 | 78 | 21 | 6.5E-57 | ||
PRINTS | 99 | 112 | 14 | 6.5E-57 | ||
PRINTS | 120 | 130 | 11 | 6.5E-57 | ||
PRINTS | 121 | 138 | 18 | 3.5E-31 | ||
PRINTS | 139 | 151 | 13 | 3.5E-31 | ||
PRINTS | 139 | 154 | 16 | 6.5E-57 | ||
Gene3D | 167 | 304 | 138 | 1.7E-111 | – | |
PRINTS | 186 | 198 | 13 | 6.5E-57 | ||
PRINTS | 187 | 202 | 16 | 3.5E-31 | ||
ProSitePatterns | 187 | 197 | 11 | - | ||
PRINTS | 241 | 256 | 16 | 6.5E-57 | ||
PRINTS | 243 | 258 | 16 | 3.5E-31 | ||
PRINTS | 257 | 274 | 18 | 6.5E-57 | ||
PRINTS | 297 | 310 | 14 | 6.5E-57 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi4g1v0096700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…