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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0096900 |
| Transcript ID | LotjaGi4g1v0096900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein family; TAIR: AT5G67385.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q66GP0|Y5738_ARATH BTB/POZ domain-containing protein At5g67385; TrEMBL-Plants: tr|A0A0R0HCA2|A0A0R0HCA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0096900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:13103060..13109098) extracted from Lotus japonicus Gifu genome v1.2.
CTTCATGTTTGTATTTTGCTCCTCCTCCTACTTATAGTCATATGGTCCTATTACCGCTCATATATATTCCTTGCTGTACC CTCTAAAGGTTTGTGGTCTTTGACTTCAGATTCTACTCATTATTGTCTTTCTAGAATACTTGTGCAGTTTAGCATGGACG ACCTTCTCATTCGAATACATTTTCAAATGGATATATAGAGTAAGCAACATTCTGCTCCCTTACCCCTTTTGCCCTGAAGA AAATATAACTAGATGACCTTTGATTTGGATCACTTTTCACAAAAACTTGCAACACTTAATCAAACCCAACCATGTAAATG GTTTTCATATTATATTCTTAATAATACTCTTTAGGAGCAAGATCAAGAGAAATCTACAACAGCTGCTGCCTGCTGGTGAC TTGCTGAGGAAGAAGGAACTTAAATCTAGTGCAATGAAGAAAACAAGTGAATGGTATATATACTTTTTAACCCTCTGAAA CTCATTCATCGAATTCTCTTATTCCATATGCTCCCAACTTTCTTACATGTTATGTGTAAAATTACTGAAAACCTGTGGCT TCTTGAACTACTTATTTACAGGAATTTTCCCCAGGAGATTCCAAGTGATGTCACTGTTCAAATTGACAATGCTTCCTTTT CATTACATAAGGTAGTGAACCAATTCAACCAACATGTATCTTTTGCTGCATGTATCAATCTAATCAATCAGAGGATCATT ATATGGAGAGTACTGATATATAGCTCTTGTTAATTTCCAATCAACTGTGGATAGCACATCATACATGCTATTTCTTTTCT TTTCTTTCCAGTCAATTTATTTGCTTTTTATATTCAAAAAGACCTTAGATTATGAAGCAAGATATTTGTGTACATAATTA TTGAACTTTTCTTCATATCTTGTGATGTAATTTGCAGTTTCCATTAATTTCCAAGTGTGGATACATAAGGAAGCTGGTTT CAGAATCTAGTGAAGCTGATGTTTCATTTATTGAACTCTCGAATGTCCCCGGGGGAGCAGAAGCATTTGATTTAGCAGCA AAGTTCTGCTATGGGATAAATTTCGAAATAAGCGTTGAAAACATCGCTATGCTTCGCTGCGTGGCAGAGTATCTTGAGAT GACAGAAGACAATTCCATTGGAAATTTGGTGGGAAGGAGTGATTTTTACTTGAATGAAGTGGCACTAGAAACCATTTCCG GAGCTGTTTCTGTCTTGCATATGCCAGAAACGCTTCTTCAAGTTGCAGAGAAAGCGAAATTGGTGAACCGATGCATAGAT GCAATTGCATACATGGCCTCCAAGCAAAGCCAGTTATGTTCACCTGCAAGAAGTCAATGTAGCAGTGATGGAGTGATGTC TTCCTCCATGGCATCTCACAGAAGGCCAGTAGTTCATTGGTGGGGTGAAGATTTGACAGTTCTCAGAATTGACATTTTTC AAAGGGTTTTGATTGCTATGATGGGAAGAGGGTTTAAGCAGTTTGATCTTGGTCCTATTATAATGCTCTATGCTCAGAAA TCTTTGGAAGGTTTGGTAAGACCCTTTATTAAAACATGGAAAACTTCTATATATTTTTCTTTTGAGAGCAGAAACTATTT TAGTGCATTCAGGTGCAAAACCATGATTTAGTCAAAATTACGGTGGACATACACAAAAGCTAAGGGAAGTTAATTTTGTC TACTGACAATAGTTTTCCATCATGAATTCAACATGCACTTAATAAGAAAAAAAACGGACTTAAGAACAACCCAGGTGATT AAGAAAAGCAATACATAAGAAGAAAAAGGTAACACATAAAGCCTATGTACATGATAGCCCACAAGTTTTGATATCTATGA CCTCCAAGATTGGGGAAAGCTGTAGCATAGTTTTCCAGTATCCTTATCCTGTTTGCAACCTTAATTGTCCAATTTAATTA AAAGCTTATGGAAATAAGCGATTATTGTATAAGCGCTATTTTAGAAGCAAATTTGAGAAGGTTATTGGAATAAGCTAAAA TTAGTTTATCGGTAGGTATCGCCGTTTATTCATAAGCTAATCTGAACAACTTATGAAAATAATGTCAAAAAGAGATTATA GATAGGTCATAAATTATTTACATAAGTTCTCCTAAACACTTGCATAAACGCTTATGCTGTAAGGTATGCTTAAATAAACT CTTCCAATTTGGCCTAAATAGAATAGAATTGTTCCTCATAACGAAATTCAAGACATTCCTACATCAGTATGGTTTTATGT ATTGAATCTTGAAATTTCATTTTTGTGGTGCAGGAGATATTTGGAAAGGGAAGGAAGGAGCTTGAACCACAACATGAGCA CGAGAAGAGGGTTGTTGTAGAGACACTAGTGAGCCTTCTACCAAGAGAGAAGAATGCAATGTCTGTCAGCTCTCTATCCA TGTTGCTCCGAGCAGCAATCTATCTTGAGACAACCGTTGCTTGCAGGCTTGATTTGGAGAAGAGAGTGGCCATGCAATTA GGACAGGCTGTTTTAGATGATCTTCTGATTCCTTCCTATTCCTTTCCCGGGAACACTTTGTTTGATGTGGATACAGTGCA GAGGATCGTGGTGAGTTACCTTGAATTTGAAATAGGAAATCATTCAGTGTCCAGTGCAGATGATGAGTATTTTTCTCCTT CACAAAGAGGTATTGTAAGGGTTGGAAAGTTAATGGAGAACTACCTTGCTGAAATAGCTGCTGACAGAAATTTACCGGCT TCAAAGTTCATCAGCATTGCTGAACTAATTCCTGAACAATCAATACCAACAGAAGATGGGAAGTATAGAGCCATAGACAT CTATCTCAAGGTACGGTTTTTATACTAAGTGCATGTTTAGAAATTCTTCTACAATTAACTCAAAAATCAGAATCAACTAT GAGCAGAAGCAGTAGCTTCTGAATTTTAGATTTCATTCTGAAGAAAGAGAAGATTACCTAAACATGCTATAAGATGGTTG TACAACGTCTCAAATTACTCATTCTTGATTGGCTTAAAAGCATTTCATGCCCCTGATGTATTACAGTTGTGCAAATGTCG CCCCTACTCTTTTTTTGTCTACATTTGTACCCTTCATGTTTCTGAAAAGTGCAACGAATGCCCCTCCGTCACTCTGACGT TAAAAATGGATGACGTGGCTGTTAAATGCCACATCAGCATCCTACGTGGCGTGACACGTCATTAAATAAAAATCAGAAAT TGGAAAGGTGGGGGGAGTTTCGAACCCGGGACTTCAAAGTGGCAAAACAAGCCCTTAACCAGTTGAGCTACTTAAATAAT TGTTCTATTTAGCAACAGAATTATATTTATAGCATTTATCTTATTCATCTTCTTCCCTCACTCTGACAAATTTCCTACAT GAACAAACTCACATTTTCAGCAATTTCTCAAACTCAACCCCACTCCACGTGAATCTGACAAACTCAATTTAAGGATATAG AAAATGATTTTGTTTTATTCCCTTAATTTGAAATATTGTAACACAATGTAATATATAACAATGTAATATATAACACTGGT TGAGGTTCTCAGTGCAATTGTCGTTGGAGTTGCGTTTGCTATCGAAGAAATTGGAATTACGATTTCTAAAGAAGGAGATT CAAAGTTCCGGTTTTTATTTTTTTGGGGTGTTCTGTTTGGGTATGAGGATTGAAATTTAGGCTGCGTTTGGGGATTCAAA ACAACCATTAACCAGTTGAGGTACTTAACCAGTATCAACGAGATTTGAGAGCTTTTCCAGCGAGCCACCCGACCTGCAAA TGAGGTTTCCAAACAAACGGTAAAGCTTTTGGAGAAACGGACACCACCGTCGTGTTCCTGGCCGCGAAAGGATGAAGACC CACTATTCCTTTCCTCCTCCGGCGAAACTCCATCATAGACCGCCGTGAACCGCCACCTTCTCCGGCGAGACCTTCGCCGG GAAATCTCCAGAATTCTCCCAAACTTTCCTGAATTGTTCTTTACTCACCCAAAAACGTTTTTAAGGTAATCCGGAGAGGG TTTAGTGAAGAAATTCGAAGAACTAAGGTTGGGAAAATGATGAAGGTTGAGGGTGGTGATGACTCAACCATGGTGGGTAA GGCTTCTCAGCCATGGAAAAGAAAGCACGATGAAGAGAGCTTTACTGGTTGTTCCATGATGATGGTGAGGGAAGAAGAGG AAGGTAAAATGCAGTGGTTGCTCCATGGTGATGGTGAGGGAAGAAGAGGAAGAAAAAGGCATGGTGATAATGAGGGAAGA GGAAGAAAAAGGCATGATGATGGTGAGGGAAGAAGATGAATAATATAAATTCTATAAATAAAATTATGTTGCTAAATATA ACAATTATCTAAGTAGCTCAACTGGTTAAGGGCTTGTTTTGCCACTTTGAAGTCCTGGGTTCGAACCCCCCCACCTTTCC AAATTCTGATTTTTATTTAATGACGTGTCACGCCACGTAGGATGCTGATGTGACATTTAACAGCCACATCATCCATTTTT AACGTAAGAGTGACGGAGGGGCATTCGTTGCACTTTTCAGAAGCATGGAGGGTACAAACGTAGACAAAAAAAGAGTAGGG GCAACATTTGCACAACTGTAATACATCAGGGACATGAAATGCTTTTAAGCCTTCTTGATTGAAGCTTATTTCCACTTATT GTACTGCTATAATTTTTTACTTAAACAAGCACTCATAGTTTAGTATTTTGCATACTAATTACTAATAATAGGTAATGTTT GGCACATAGATAAAACAGCATGAAAAAGGGTGTTATGTTCTGTTTTTTTTGTACCACTTTTCCTACTTTCTGCCATGTTT TATTCTGCTCTTAATATGCACCAAACATAGAAAGAGAACATGCCTATCAAATTGTACCTTAGTTTTGTGTCTCCTATGCA GCACATATTTTTAGGCTTCAGCATATTTGGTTTTACTTTATACATTGATGTTGTCACTTGTCATATAGGTTTATGACAAA ATTGAACTTACAATAGTTCTGTCATTGAGTTCAAGGATATAATAGTTACTGTGTTCTTCTCATATTAAATTTTTACATGA CACGTTGGAATCATAAAGTTTTAAATTGCAGTTGCGAACCGATAAATGCGGGTTAAAATGGCCACAATTGCGGTCACAAT GCTGTAGCGTGGACTTTAAAACCCGTTACAATGCAGCCACATTTGTGGTTGCCGACTGCAATTTAGAACTTCATGATGAG TGCTGATAAAATTTGGAATTATCAACAATTCTCAGGCTCATCCTTTTCTAAGTGAAATGGAGAAGAAGAACGTTTGCAGC GTGATGCATTGCCAGAAGCTATCACGCGATGCGCGTGCACACGCTGCTCAAAATGACAGGCTTCCGGTCCAAACAGTACT TCAAGTTCTCTCTTTCCAACAGAAACATCTTCGCGAGACCATGAATGATGGTGGTGTAAATTGGGATGGTACTTCGATTC CTGACAAGTTGAATGTGTATTCTGCTGAGCTGAATCCAGTTTCAAAAGTAATCTCCAATTTACGTAGAGAAAATGAAGAA CTGAAACGAGAGATTGTGAAGTTGAAGATGAAGCTACAAGAGATTGAAAAACCTGCACATGAATCATCAGCTCCTAGTAG TCCTTTGATAAGTGCTTATTCACCTTCAGTGAACAAGCCTCCATTGCCTAGAAAATCATTCATGAAATCTGTGTCCAGAA AACTTGGGCGTCTTTATCCTTTTTCACGTGCTGCTGCTGATACTGTCACAACACCTTTCAAAGATCGTTTGAAACCAGAG AAGAAAATACGCCATTCCATATCTTGAGATTGTGCAGACTGCAGAGTACCTGTCTGTTTGTTGTTTGTTTGCAGAGACTT GTACGTAAACAGAATTAGTCTTTCGATTTTACTTCATTCGTGTTTTGCTCTTGTTTTGATCTCATGTCAAGATTCAAGAA CATTTTAAATAAAAATATTACGAACAATAATGATTTGTGTACATACGGTAGCTAGCTGCGACCTTCTGGCGGTTTAGGAA GCGCAACTGACAGGCACAAGATTGTGTATTAATATTTCC
CDS sequence (LotjaGi4g1v0096900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAAAACAAGTGAATGGAATTTTCCCCAGGAGATTCCAAGTGATGTCACTGTTCAAATTGACAATGCTTCCTTTTC ATTACATAAGTTTCCATTAATTTCCAAGTGTGGATACATAAGGAAGCTGGTTTCAGAATCTAGTGAAGCTGATGTTTCAT TTATTGAACTCTCGAATGTCCCCGGGGGAGCAGAAGCATTTGATTTAGCAGCAAAGTTCTGCTATGGGATAAATTTCGAA ATAAGCGTTGAAAACATCGCTATGCTTCGCTGCGTGGCAGAGTATCTTGAGATGACAGAAGACAATTCCATTGGAAATTT GGTGGGAAGGAGTGATTTTTACTTGAATGAAGTGGCACTAGAAACCATTTCCGGAGCTGTTTCTGTCTTGCATATGCCAG AAACGCTTCTTCAAGTTGCAGAGAAAGCGAAATTGGTGAACCGATGCATAGATGCAATTGCATACATGGCCTCCAAGCAA AGCCAGTTATGTTCACCTGCAAGAAGTCAATGTAGCAGTGATGGAGTGATGTCTTCCTCCATGGCATCTCACAGAAGGCC AGTAGTTCATTGGTGGGGTGAAGATTTGACAGTTCTCAGAATTGACATTTTTCAAAGGGTTTTGATTGCTATGATGGGAA GAGGGTTTAAGCAGTTTGATCTTGGTCCTATTATAATGCTCTATGCTCAGAAATCTTTGGAAGGTTTGGAGATATTTGGA AAGGGAAGGAAGGAGCTTGAACCACAACATGAGCACGAGAAGAGGGTTGTTGTAGAGACACTAGTGAGCCTTCTACCAAG AGAGAAGAATGCAATGTCTGTCAGCTCTCTATCCATGTTGCTCCGAGCAGCAATCTATCTTGAGACAACCGTTGCTTGCA GGCTTGATTTGGAGAAGAGAGTGGCCATGCAATTAGGACAGGCTGTTTTAGATGATCTTCTGATTCCTTCCTATTCCTTT CCCGGGAACACTTTGTTTGATGTGGATACAGTGCAGAGGATCGTGGTGAGTTACCTTGAATTTGAAATAGGAAATCATTC AGTGTCCAGTGCAGATGATGAGTATTTTTCTCCTTCACAAAGAGGTATTGTAAGGGTTGGAAAGTTAATGGAGAACTACC TTGCTGAAATAGCTGCTGACAGAAATTTACCGGCTTCAAAGTTCATCAGCATTGCTGAACTAATTCCTGAACAATCAATA CCAACAGAAGATGGGAAGTATAGAGCCATAGACATCTATCTCAAGGCTCATCCTTTTCTAAGTGAAATGGAGAAGAAGAA CGTTTGCAGCGTGATGCATTGCCAGAAGCTATCACGCGATGCGCGTGCACACGCTGCTCAAAATGACAGGCTTCCGGTCC AAACAGTACTTCAAGTTCTCTCTTTCCAACAGAAACATCTTCGCGAGACCATGAATGATGGTGGTGTAAATTGGGATGGT ACTTCGATTCCTGACAAGTTGAATGTGTATTCTGCTGAGCTGAATCCAGTTTCAAAAGTAATCTCCAATTTACGTAGAGA AAATGAAGAACTGAAACGAGAGATTGTGAAGTTGAAGATGAAGCTACAAGAGATTGAAAAACCTGCACATGAATCATCAG CTCCTAGTAGTCCTTTGATAAGTGCTTATTCACCTTCAGTGAACAAGCCTCCATTGCCTAGAAAATCATTCATGAAATCT GTGTCCAGAAAACTTGGGCGTCTTTATCCTTTTTCACGTGCTGCTGCTGATACTGTCACAACACCTTTCAAAGATCGTTT GAAACCAGAGAAGAAAATACGCCATTCCATATCTTGA
Protein sequence (LotjaGi4g1v0096900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKTSEWNFPQEIPSDVTVQIDNASFSLHKFPLISKCGYIRKLVSESSEADVSFIELSNVPGGAEAFDLAAKFCYGINFE ISVENIAMLRCVAEYLEMTEDNSIGNLVGRSDFYLNEVALETISGAVSVLHMPETLLQVAEKAKLVNRCIDAIAYMASKQ SQLCSPARSQCSSDGVMSSSMASHRRPVVHWWGEDLTVLRIDIFQRVLIAMMGRGFKQFDLGPIIMLYAQKSLEGLEIFG KGRKELEPQHEHEKRVVVETLVSLLPREKNAMSVSSLSMLLRAAIYLETTVACRLDLEKRVAMQLGQAVLDDLLIPSYSF PGNTLFDVDTVQRIVVSYLEFEIGNHSVSSADDEYFSPSQRGIVRVGKLMENYLAEIAADRNLPASKFISIAELIPEQSI PTEDGKYRAIDIYLKAHPFLSEMEKKNVCSVMHCQKLSRDARAHAAQNDRLPVQTVLQVLSFQQKHLRETMNDGGVNWDG TSIPDKLNVYSAELNPVSKVISNLRRENEELKREIVKLKMKLQEIEKPAHESSAPSSPLISAYSPSVNKPPLPRKSFMKS VSRKLGRLYPFSRAAADTVTTPFKDRLKPEKKIRHSIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 574 | 574 | 2.8E-252 | ||
| PANTHER | 1 | 574 | 574 | 2.8E-252 | – | |
| SUPERFAMILY | 7 | 100 | 94 | 2.59E-15 | ||
| Gene3D | 8 | 103 | 96 | 1.3E-9 | – | |
| Pfam | 12 | 99 | 88 | 2.3E-6 | ||
| CDD | 12 | 110 | 99 | 1.70127E-39 | – | |
| ProSiteProfiles | 15 | 83 | 69 | 9.889 | ||
| Pfam | 190 | 441 | 252 | 1.3E-81 | ||
| ProSiteProfiles | 190 | 466 | 277 | 79.753 | ||
| Coils | 494 | 528 | 35 | - | – | |
| MobiDBLite | 526 | 555 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0096900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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