Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0106900 |
| Transcript ID | LotjaGi4g1v0106900.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transcription factor, putative (Protein of unknown function, DUF547); TAIR: AT4G37080.2 ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547); Swiss-Prot: sp|Q8RWQ4|RGAP7_ARATH Rho GTPase-activating protein 7; TrEMBL-Plants: tr|K7MM81|K7MM81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0106900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:14981412..14987043) extracted from Lotus japonicus Gifu genome v1.2.
ACTCAACATCAACTTAGTTGGTACTCAAAAACAACTGGATCACTTTTTTTCTGGGAGGAGGCAAGAAGCTTGACATCCTC GTCGTTTTGCTTCTTCTGCTTCTTCCGTGCTCTTTTCTTACTGTCTTTCACTCTGTTCGAGATTCATAGTAACACACAAA ACTAATAATATATATACAAAACTACAAACCATTCATTTTTTTGCAGAAGAAGCTAGCATTTTTCTCTCCCTCTAGTTTTT TCTTTCAATTTTCCCGCTCAGAATCCTTAGTTTTCTTCTCTATCATTGCATTGTATTCTTTCTCGTTTTCTGAGAAAGTA GAAGAAGAATAACAGATGAATGGCAGAGCACGCACCACTCTTCACTCAATGAAACCTCCTTTGAATGACACCAAAGTAAT AATATCTTGTTCTTGTTCTTGTTCTTCTTCTAGATTCCTATTTTGTTTTTAATTTCAAAAATATATTTTTAGTTTATGAT TTTATCTTGTTCTATTGCAAGATCTCAAGAAACAAATGGAATGGCCAATTGTTAGGGAATAATAATGGTAAAAAGAAAAA GTGATTGAGCATGAGCTTGATTTCAAAGAATGGAATTTGTCTTCCAAGTTTGGAATCTTTCTTTTGAATTGTGTAATCTA CTGCTTAGCTGAGAAAAAGTGTGTGGTGCTTTTGATCCAAATCTTGAAACATGGTTCTTTAACTTCTCTTAAAGAAAAGA ATAATTTATTTATTTATGCATTTTTCTTTTCACTTCCACTTTTGGCTTCTTTTCAAATCAAGTTTTGTGTGATGGATTTG TTTATTGCTGAATGTGCAAAGCAGGGGAAGATGGAAGGTGGAGGAAACAGAACAATGGCTGGGGGGCGTCGATCCAATCG AGAAAGGAAGATGGCTTTGCTACAAGATGTAATTTGAATCTTCCTCAAAAAATGGTATTTGTAGATTCCTTTTTGTTCAT TTATCCAAGTAGTAATGTTTTCAAGCTTGGTTGCAGGTGGATAAGTTGAAGAGGAAGCTCAGACATGAAGAGAATGTACA TAGAGCCTTAGAAAGAGCATTCACAAGACCTCTGGGATCCCTACCTCGTCTTCCTCCTTATCTTCCTCCATATGTAAGTA TTTTTCTCTTCAATGTTGTTCCTGGCAATGACTTAGAATGTTTTTGTATAAATGTTGGGTGAATGTAAACAGACATTTCT TCAATCCAACCCTTCACATCCGTTAGCTTTTATGCCTTAGAATGTGCGCGAATGTGCTTTGGGGACTTTCCCAATAAAAA TCAAACAGAGTCGAATTCATAGTTTCAGTGAAGTTTTTTTCTTGATTTTACTTGTATTTTCTGTTTTTGTCTTCCTCCAC ATGTTACATGTTAGTATGTATCTCTTCGTGCATTTTTTAATACACGATGAAGCCAAAATCACCGTGGACTGTCATAAAAG CTAAAGAAAGTTGTTTCCTGTCCACCGTGATTTTGACTCACTATGATTTTTCACCATATACCCAAACATGCACTTATGTT GTGTTTGGCAATGAGTTCATGGTAACTGAATTGTAGTACTAGTGAGGTTTTTCTTCATTTTTGTAGTTTTTTTTTGTTTT TGTCTTTTCTGGGTCCTGGATGATAACTAACTAGTACTGTTACTGTGTGTGGTTATTTTAGACATTGGAGCTTCTAGCTG AAGTAGCAGTGTTGGAGGAGGAAGTGGTTAGACTTGAAGAGCAGGTTGTGAATTTTAGACAAGGTTTATATCAGGAAGCA GTGTACATTTCCACAAAAAGGAATGCAGAGAATTTGAGTGACCCTATTGACCAAACCCCTATTAGGAGTTCCAAGCACCA GAGATCAAAATCCATGTCCCAAAGTGAGTTTAATTCAACTATGATAACAACAAGGTTGCCTCAGCCTTCTCTAGCCAGAA GTGCTTCCAGCAGAAAGCTGTTATTCTCCTCTGATACTGTCACTGATCAAACTGCTGGGAAGCTAGCTCATGGGAAGCAA TTGCACAGAAAGCAAGATTCATTCTCTTCTATCCCAGAAGAGGGAAGGGGAAAGGAGAATAGGTCATCTAGCAACTTAGT GAAAGATAAGCAATCTCCAGAAAAGAAACTGGGTAAAATCATTACTCCAGTAAAGAGGTCTCCATTCAAACAAGAATCAG CTGAGAAGAGCTTGGATCACTTGAAGTTGCAGGTAAATTGTAACCTCACAAACAAAATTTTCAACAGTTCTGTAAAATTT GATTATGGTCCCTACCTTCTATGATTTTGGTCTCTACTTTTAGTTTTTTGCCTATAACTTTAGTTTCAGTTCTTTCTTTA TAATCCCACTGCTAATTGGTGATATGGCTAACAGAAAGCACATCACCATTCCCACGTGTCAGAGTAATCTTATATAACGT ATTTTATTGTGATGAAAGATATGATAGCTAACACTTTTAATATGTCACATGGGATTGTTCGGGACATATGGCAATGGTGA TGTGATCCTCCATTAGCCACATCACCCGTTAACCGTGAAATATTATAAAATGATGACTTAAACCTAAGTTTTTTTTTTTT TACTAAAGTAGGGACTAAAACCATAAAAATGGGACCAAAAACTTGTTTAAGCCTTTCAATAATTATTAGTTAGTATGTGA TATGATCATATGAGTACTGTACTGTCATTTCATCACTGTTTTCCCTTTTTCTTGCCCAGTTGGATTGGAGATTATCAGAG CAGGAAAGGGCACAGACTTCATCAAGTTCATCAGATGATAAAGTGTCAGAAGTTGATAGCACGCCCAATAGAGTTTCAGA GGATCTTGTGAAATGCTTGTCTAGCATATTCATGAGAATTAGCACATCCAAGGACAAATTTGGGGAATCTAAGACGCCTT CGCGCTTCATATCAGCATTGAACCAATGCAGCAAGGAAAAGGATCAGTTCTGTGATCCTTATGGTATCTGTTCAGAATCT AAAACAAGAGAAGTTGGCCCTTATAAGAATGTATGTGAAGTTAAAGCCGCCACGGTTGATTTCAACAGAACAACAAATGC AGTGTTTCTAATCCACAGATTAAAGTAAGTTGTAGATGCATACTAGTTGTTGGTTAATGATATATGGATATCTATCTAAC CTTGCAGACATATTCAGGTTCCTACTTGGGAAACTTGCCTCTTTAAATTTGAAGGGCCTTAATCATCAGGAAAAACTTGC ATTCTGGATAAACACTTATAATTCCTGCATGCTAAATGTAAGACACCTTTCTGCCACTTATTTTAGTTCTAGATTTGAAT ATTTGATGTCATCCTTATCTTTCCTAAGATGCAGAGAGTTTGACTTTAACACCTTATTATGGTTTCAATATTGCAGGCAT ATCTAGAACAAGGCATACCTGAGAGTCCTGAAATGGTTGTAGCACTAATGCAAAAGGTATGATTATCGATATCTAGGCAT CATTCACAACATTATCCTTTTATCCTTTTTAACACAAGAACAAGAGTTTGTTTGGTTGACCGCTAAAAGAAATATGAAAA TGAGAAAATAACACATACCTAGATACTTTTTGTTGACAAAAAATGCATCAGGATGTGTTATTTTCCCGTTTTCATACTTT CTAATGGTAGACAAACGGATTCTAAAGGTCCAAGTTAACTATGACATGGCAATGACATGTTTCAGGCAATGATAGTAGTG GGGGGCCAGTTGCTCAATGCAATTACAATAGAGCATTTTATCTTGAGACTTCCTTATCATCTGAAGTTTGTAAGTCCAAT AATCTTGTCCTTTCTTTGAATTTTCGAGTTTAGACATGATAAAGTTTGAGTATCCTTTTTTTGATTTTTTTTTTGTTTTC CTTTATACTGATGTAATTGTCTTAAAATCATATTGCAATTAATCCCTTGATTTTCACCTTTGCTTCCTGCGACAGACATG TCCAAAAGCTGCAAAAAATGAAGAGGTGAAAGCACGAAGCATATTTGGCCTGGAATGGTCTGAGCCTTTAGTAACATTTG CACTTTCCTGTGGAAGCTGGTCTTCACCTGCAGTATGTCTTTTGTATCTCTACTTAGCCGACAATATGACTATATTAGAC CTGATTTAATTACTTTTGAGCTATAGCTACCATGTTAGTATGTTACCAACTGGTTTGATAATGTATGACCAAATTAGGTT GTGCTTTGCTATCTGTTTGCACGGCTGCAAATGGATATTCACACGGAATTTAAGATGAAAACAGTGAATGGAGTTCTTCT GCGGATTGGGTTGAAAATCCGTTAACACTCAACTCGTATTCAAACACACACTTAGAGATGTCATGGATCTTAATTTGGAT TCAAAAAATAGCTCAGGGATCTTAATTTCATTGTGAGAACATTATAGTAATTAAAAAAAACCTAAAACTTTCTTGTTTTA ACTTTTCCATCTTTGTCTATTAGGATTAAGGTTTTAAATTACAGTTGCGGTTGCTATTACGGTTATGGTTGCGTTGCGGA ATTGCGGACAAATGTAGATTGATGTGGTAGCAATTGTGGTCGTAACGCCAATGCGGGGAGTCCAAATCCCTTTATGTTGC GAACTGCAGTTTAAAGCCTGATTTGGATCATAACAACATTCAATTTTAACATTATAAAATTTGTTATTGTGAATCCTAAA AGTTTAATCTATAAGGTGATTGAATTGATTTTAATATCTAATGAATATGTTCATATTTATTTCTTGATATATTATCTAAT GAATATGTTCATATTTATTTCTTGATATATTTCCTTTGATTAGTTGCATTGACTAAGCAAGTCTTTTTTTGTTTGAAGGT GAGAGTGTACACAGCATCAAAAGTTGATGATGAGTTAGAAGCAGCAAAGAGAGACTATTTACAGGCTTCAGTTGGCATTA CAGAAACAAACAAGTTAATAATCCCCAAGTTACTGGACTGGTATTTACTAGACTTTGCAAAGGACCTGGATTCTTTATTA GACTGGATCTGCCTCCAACTACCTGACCAAATAAGAAACCAAGCAGTTAAATGCCTTCAAGAAAGAGGAACAGACTCGGT TTCACAGAGGGTACAAATGATGCCCTATGATTTCAGTTTCCGGTTGCTTTTACACCAATAATTGCGTCTTTGGAAATCCT TCCACAATTGATTAAAAATGCATAATCAATTATAGGGAGAATCTATTATAGGGAGAATCTTCTGTGAGTAACTTTTAGAT TTCAAAATTGACACTGTAGAAAGAGAAATCGATTCAAACATGTTACAAGTCGTCGTGAGTGGAGGGTTCTGAACTTTGGT GTGGTGGGTTCTTTTGTTTTTTTGTACATGGGATAGTTCACAGAGAAAGTACATAATTCAAAGCATGTATTGTTTTCATT TGGGAATGGTTTAGGACTTTTGGGGTTCTGCAATTCGGTCAATATTGCTGATAAGTTATGGTTTTAGAAAATATACTGAG AAATTGAGGTCTCTTAGACATTGAGTTGGCTTCAAAGTTCAAACGTTTTGGACTTGTAATAATGTCATATATTGATTTAA CTTTAACCCCATGGCACAAAATAGCAATATAGCTAACTGTTAACAAAGCAACGCTTACCTATGTGAACATAACTTGAAGG CTTGAACCAATGTTTTAATCATTACTAGAGTT
CDS sequence (LotjaGi4g1v0106900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGGCAGAGCACGCACCACTCTTCACTCAATGAAACCTCCTTTGAATGACACCAAAGGGAAGATGGAAGGTGGAGG AAACAGAACAATGGCTGGGGGGCGTCGATCCAATCGAGAAAGGAAGATGGCTTTGCTACAAGATGTGGATAAGTTGAAGA GGAAGCTCAGACATGAAGAGAATGTACATAGAGCCTTAGAAAGAGCATTCACAAGACCTCTGGGATCCCTACCTCGTCTT CCTCCTTATCTTCCTCCATATACATTGGAGCTTCTAGCTGAAGTAGCAGTGTTGGAGGAGGAAGTGGTTAGACTTGAAGA GCAGGTTGTGAATTTTAGACAAGGTTTATATCAGGAAGCAGTGTACATTTCCACAAAAAGGAATGCAGAGAATTTGAGTG ACCCTATTGACCAAACCCCTATTAGGAGTTCCAAGCACCAGAGATCAAAATCCATGTCCCAAAGTGAGTTTAATTCAACT ATGATAACAACAAGGTTGCCTCAGCCTTCTCTAGCCAGAAGTGCTTCCAGCAGAAAGCTGTTATTCTCCTCTGATACTGT CACTGATCAAACTGCTGGGAAGCTAGCTCATGGGAAGCAATTGCACAGAAAGCAAGATTCATTCTCTTCTATCCCAGAAG AGGGAAGGGGAAAGGAGAATAGGTCATCTAGCAACTTAGTGAAAGATAAGCAATCTCCAGAAAAGAAACTGGGTAAAATC ATTACTCCAGTAAAGAGGTCTCCATTCAAACAAGAATCAGCTGAGAAGAGCTTGGATCACTTGAAGTTGCAGTTGGATTG GAGATTATCAGAGCAGGAAAGGGCACAGACTTCATCAAGTTCATCAGATGATAAAGTGTCAGAAGTTGATAGCACGCCCA ATAGAGTTTCAGAGGATCTTGTGAAATGCTTGTCTAGCATATTCATGAGAATTAGCACATCCAAGGACAAATTTGGGGAA TCTAAGACGCCTTCGCGCTTCATATCAGCATTGAACCAATGCAGCAAGGAAAAGGATCAGTTCTGTGATCCTTATGGTAT CTGTTCAGAATCTAAAACAAGAGAAGTTGGCCCTTATAAGAATGTATGTGAAGTTAAAGCCGCCACGGTTGATTTCAACA GAACAACAAATGCAGTGTTTCTAATCCACAGATTAAAGTTCCTACTTGGGAAACTTGCCTCTTTAAATTTGAAGGGCCTT AATCATCAGGAAAAACTTGCATTCTGGATAAACACTTATAATTCCTGCATGCTAAATGCATATCTAGAACAAGGCATACC TGAGAGTCCTGAAATGGTTGTAGCACTAATGCAAAAGGCAATGATAGTAGTGGGGGGCCAGTTGCTCAATGCAATTACAA TAGAGCATTTTATCTTGAGACTTCCTTATCATCTGAAGTTTACATGTCCAAAAGCTGCAAAAAATGAAGAGGTGAAAGCA CGAAGCATATTTGGCCTGGAATGGTCTGAGCCTTTAGTAACATTTGCACTTTCCTGTGGAAGCTGGTCTTCACCTGCAGT GAGAGTGTACACAGCATCAAAAGTTGATGATGAGTTAGAAGCAGCAAAGAGAGACTATTTACAGGCTTCAGTTGGCATTA CAGAAACAAACAAGTTAATAATCCCCAAGTTACTGGACTGGTATTTACTAGACTTTGCAAAGGACCTGGATTCTTTATTA GACTGGATCTGCCTCCAACTACCTGACCAAATAAGAAACCAAGCAGTTAAATGCCTTCAAGAAAGAGGAACAGACTCGGT TTCACAGAGGGTACAAATGATGCCCTATGATTTCAGTTTCCGGTTGCTTTTACACCAATAA
Protein sequence (LotjaGi4g1v0106900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNGRARTTLHSMKPPLNDTKGKMEGGGNRTMAGGRRSNRERKMALLQDVDKLKRKLRHEENVHRALERAFTRPLGSLPRL PPYLPPYTLELLAEVAVLEEEVVRLEEQVVNFRQGLYQEAVYISTKRNAENLSDPIDQTPIRSSKHQRSKSMSQSEFNST MITTRLPQPSLARSASSRKLLFSSDTVTDQTAGKLAHGKQLHRKQDSFSSIPEEGRGKENRSSSNLVKDKQSPEKKLGKI ITPVKRSPFKQESAEKSLDHLKLQLDWRLSEQERAQTSSSSSDDKVSEVDSTPNRVSEDLVKCLSSIFMRISTSKDKFGE SKTPSRFISALNQCSKEKDQFCDPYGICSESKTREVGPYKNVCEVKAATVDFNRTTNAVFLIHRLKFLLGKLASLNLKGL NHQEKLAFWINTYNSCMLNAYLEQGIPESPEMVVALMQKAMIVVGGQLLNAITIEHFILRLPYHLKFTCPKAAKNEEVKA RSIFGLEWSEPLVTFALSCGSWSSPAVRVYTASKVDDELEAAKRDYLQASVGITETNKLIIPKLLDWYLLDFAKDLDSLL DWICLQLPDQIRNQAVKCLQERGTDSVSQRVQMMPYDFSFRLLLHQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 41 | 41 | - | – | |
| PANTHER | 30 | 606 | 577 | 6.7E-237 | – | |
| PANTHER | 30 | 606 | 577 | 6.7E-237 | – | |
| Pfam | 38 | 119 | 82 | 1.8E-21 | ||
| Coils | 42 | 69 | 28 | - | – | |
| Coils | 88 | 115 | 28 | - | – | |
| MobiDBLite | 132 | 170 | 39 | - | – | |
| MobiDBLite | 189 | 255 | 67 | - | – | |
| MobiDBLite | 199 | 241 | 43 | - | – | |
| MobiDBLite | 272 | 293 | 22 | - | – | |
| MobiDBLite | 272 | 287 | 16 | - | – | |
| Pfam | 398 | 527 | 130 | 1.0E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0106900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…