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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0106900 |
| Transcript ID | LotjaGi4g1v0106900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transcription factor, putative (Protein of unknown function, DUF547); TAIR: AT4G37080.2 ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547); Swiss-Prot: sp|Q8RWQ4|RGAP7_ARATH Rho GTPase-activating protein 7; TrEMBL-Plants: tr|A0A0B2NZR9|A0A0B2NZR9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi4g1v0106900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:14982110..14986512) extracted from Lotus japonicus Gifu genome v1.2.
TTAACTTCTCTTAAAGAAAAGAATAATTTATTTATTTATGCATTTTTCTTTTCACTTCCACTTTTGGCTTCTTTTCAAAT CAAGTTTTGTGTGATGGATTTGTTTATTGCTGAATGTGCAAAGCAGGGGAAGATGGAAGGTGGAGGAAACAGAACAATGG CTGGGGGGCGTCGATCCAATCGAGAAAGGAAGATGGCTTTGCTACAAGATGTAATTTGAATCTTCCTCAAAAAATGGTAT TTGTAGATTCCTTTTTGTTCATTTATCCAAGTAGTAATGTTTTCAAGCTTGGTTGCAGGTGGATAAGTTGAAGAGGAAGC TCAGACATGAAGAGAATGTACATAGAGCCTTAGAAAGAGCATTCACAAGACCTCTGGGATCCCTACCTCGTCTTCCTCCT TATCTTCCTCCATATGTAAGTATTTTTCTCTTCAATGTTGTTCCTGGCAATGACTTAGAATGTTTTTGTATAAATGTTGG GTGAATGTAAACAGACATTTCTTCAATCCAACCCTTCACATCCGTTAGCTTTTATGCCTTAGAATGTGCGCGAATGTGCT TTGGGGACTTTCCCAATAAAAATCAAACAGAGTCGAATTCATAGTTTCAGTGAAGTTTTTTTCTTGATTTTACTTGTATT TTCTGTTTTTGTCTTCCTCCACATGTTACATGTTAGTATGTATCTCTTCGTGCATTTTTTAATACACGATGAAGCCAAAA TCACCGTGGACTGTCATAAAAGCTAAAGAAAGTTGTTTCCTGTCCACCGTGATTTTGACTCACTATGATTTTTCACCATA TACCCAAACATGCACTTATGTTGTGTTTGGCAATGAGTTCATGGTAACTGAATTGTAGTACTAGTGAGGTTTTTCTTCAT TTTTGTAGTTTTTTTTTGTTTTTGTCTTTTCTGGGTCCTGGATGATAACTAACTAGTACTGTTACTGTGTGTGGTTATTT TAGACATTGGAGCTTCTAGCTGAAGTAGCAGTGTTGGAGGAGGAAGTGGTTAGACTTGAAGAGCAGGTTGTGAATTTTAG ACAAGGTTTATATCAGGAAGCAGTGTACATTTCCACAAAAAGGAATGCAGAGAATTTGAGTGACCCTATTGACCAAACCC CTATTAGGAGTTCCAAGCACCAGAGATCAAAATCCATGTCCCAAAGTGAGTTTAATTCAACTATGATAACAACAAGGTTG CCTCAGCCTTCTCTAGCCAGAAGTGCTTCCAGCAGAAAGCTGTTATTCTCCTCTGATACTGTCACTGATCAAACTGCTGG GAAGCTAGCTCATGGGAAGCAATTGCACAGAAAGCAAGATTCATTCTCTTCTATCCCAGAAGAGGGAAGGGGAAAGGAGA ATAGGTCATCTAGCAACTTAGTGAAAGATAAGCAATCTCCAGAAAAGAAACTGGGTAAAATCATTACTCCAGTAAAGAGG TCTCCATTCAAACAAGAATCAGCTGAGAAGAGCTTGGATCACTTGAAGTTGCAGGTAAATTGTAACCTCACAAACAAAAT TTTCAACAGTTCTGTAAAATTTGATTATGGTCCCTACCTTCTATGATTTTGGTCTCTACTTTTAGTTTTTTGCCTATAAC TTTAGTTTCAGTTCTTTCTTTATAATCCCACTGCTAATTGGTGATATGGCTAACAGAAAGCACATCACCATTCCCACGTG TCAGAGTAATCTTATATAACGTATTTTATTGTGATGAAAGATATGATAGCTAACACTTTTAATATGTCACATGGGATTGT TCGGGACATATGGCAATGGTGATGTGATCCTCCATTAGCCACATCACCCGTTAACCGTGAAATATTATAAAATGATGACT TAAACCTAAGTTTTTTTTTTTTTACTAAAGTAGGGACTAAAACCATAAAAATGGGACCAAAAACTTGTTTAAGCCTTTCA ATAATTATTAGTTAGTATGTGATATGATCATATGAGTACTGTACTGTCATTTCATCACTGTTTTCCCTTTTTCTTGCCCA GTTGGATTGGAGATTATCAGAGCAGGAAAGGGCACAGACTTCATCAAGTTCATCAGATGATAAAGTGTCAGAAGTTGATA GCACGCCCAATAGAGTTTCAGAGGATCTTGTGAAATGCTTGTCTAGCATATTCATGAGAATTAGCACATCCAAGGACAAA TTTGGGGAATCTAAGACGCCTTCGCGCTTCATATCAGCATTGAACCAATGCAGCAAGGAAAAGGATCAGTTCTGTGATCC TTATGGTATCTGTTCAGAATCTAAAACAAGAGAAGTTGGCCCTTATAAGAATGTATGTGAAGTTAAAGCCGCCACGGTTG ATTTCAACAGAACAACAAATGCAGTGTTTCTAATCCACAGATTAAAGTAAGTTGTAGATGCATACTAGTTGTTGGTTAAT GATATATGGATATCTATCTAACCTTGCAGACATATTCAGGTTCCTACTTGGGAAACTTGCCTCTTTAAATTTGAAGGGCC TTAATCATCAGGAAAAACTTGCATTCTGGATAAACACTTATAATTCCTGCATGCTAAATGTAAGACACCTTTCTGCCACT TATTTTAGTTCTAGATTTGAATATTTGATGTCATCCTTATCTTTCCTAAGATGCAGAGAGTTTGACTTTAACACCTTATT ATGGTTTCAATATTGCAGGCATATCTAGAACAAGGCATACCTGAGAGTCCTGAAATGGTTGTAGCACTAATGCAAAAGGT ATGATTATCGATATCTAGGCATCATTCACAACATTATCCTTTTATCCTTTTTAACACAAGAACAAGAGTTTGTTTGGTTG ACCGCTAAAAGAAATATGAAAATGAGAAAATAACACATACCTAGATACTTTTTGTTGACAAAAAATGCATCAGGATGTGT TATTTTCCCGTTTTCATACTTTCTAATGGTAGACAAACGGATTCTAAAGGTCCAAGTTAACTATGACATGGCAATGACAT GTTTCAGGCAATGATAGTAGTGGGGGGCCAGTTGCTCAATGCAATTACAATAGAGCATTTTATCTTGAGACTTCCTTATC ATCTGAAGTTTGTAAGTCCAATAATCTTGTCCTTTCTTTGAATTTTCGAGTTTAGACATGATAAAGTTTGAGTATCCTTT TTTTGATTTTTTTTTTGTTTTCCTTTATACTGATGTAATTGTCTTAAAATCATATTGCAATTAATCCCTTGATTTTCACC TTTGCTTCCTGCGACAGACATGTCCAAAAGCTGCAAAAAATGAAGAGGTGAAAGCACGAAGCATATTTGGCCTGGAATGG TCTGAGCCTTTAGTAACATTTGCACTTTCCTGTGGAAGCTGGTCTTCACCTGCAGTATGTCTTTTGTATCTCTACTTAGC CGACAATATGACTATATTAGACCTGATTTAATTACTTTTGAGCTATAGCTACCATGTTAGTATGTTACCAACTGGTTTGA TAATGTATGACCAAATTAGGTTGTGCTTTGCTATCTGTTTGCACGGCTGCAAATGGATATTCACACGGAATTTAAGATGA AAACAGTGAATGGAGTTCTTCTGCGGATTGGGTTGAAAATCCGTTAACACTCAACTCGTATTCAAACACACACTTAGAGA TGTCATGGATCTTAATTTGGATTCAAAAAATAGCTCAGGGATCTTAATTTCATTGTGAGAACATTATAGTAATTAAAAAA AACCTAAAACTTTCTTGTTTTAACTTTTCCATCTTTGTCTATTAGGATTAAGGTTTTAAATTACAGTTGCGGTTGCTATT ACGGTTATGGTTGCGTTGCGGAATTGCGGACAAATGTAGATTGATGTGGTAGCAATTGTGGTCGTAACGCCAATGCGGGG AGTCCAAATCCCTTTATGTTGCGAACTGCAGTTTAAAGCCTGATTTGGATCATAACAACATTCAATTTTAACATTATAAA ATTTGTTATTGTGAATCCTAAAAGTTTAATCTATAAGGTGATTGAATTGATTTTAATATCTAATGAATATGTTCATATTT ATTTCTTGATATATTATCTAATGAATATGTTCATATTTATTTCTTGATATATTTCCTTTGATTAGTTGCATTGACTAAGC AAGTCTTTTTTTGTTTGAAGGTGAGAGTGTACACAGCATCAAAAGTTGATGATGAGTTAGAAGCAGCAAAGAGAGACTAT TTACAGGCTTCAGTTGGCATTACAGAAACAAACAAGTTAATAATCCCCAAGTTACTGGACTGGTATTTACTAGACTTTGC AAAGGACCTGGATTCTTTATTAGACTGGATCTGCCTCCAACTACCTGACCAAATAAGAAACCAAGCAGTTAAATGCCTTC AAGAAAGAGGAACAGACTCGGTTTCACAGAGGGTACAAATGATGCCCTATGATTTCAGTTTCCGGTTGCTTTTACACCAA TAA
CDS sequence (LotjaGi4g1v0106900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGTGGAGGAAACAGAACAATGGCTGGGGGGCGTCGATCCAATCGAGAAAGGAAGATGGCTTTGCTACAAGATGT GGATAAGTTGAAGAGGAAGCTCAGACATGAAGAGAATGTACATAGAGCCTTAGAAAGAGCATTCACAAGACCTCTGGGAT CCCTACCTCGTCTTCCTCCTTATCTTCCTCCATATACATTGGAGCTTCTAGCTGAAGTAGCAGTGTTGGAGGAGGAAGTG GTTAGACTTGAAGAGCAGGTTGTGAATTTTAGACAAGGTTTATATCAGGAAGCAGTGTACATTTCCACAAAAAGGAATGC AGAGAATTTGAGTGACCCTATTGACCAAACCCCTATTAGGAGTTCCAAGCACCAGAGATCAAAATCCATGTCCCAAAGTG AGTTTAATTCAACTATGATAACAACAAGGTTGCCTCAGCCTTCTCTAGCCAGAAGTGCTTCCAGCAGAAAGCTGTTATTC TCCTCTGATACTGTCACTGATCAAACTGCTGGGAAGCTAGCTCATGGGAAGCAATTGCACAGAAAGCAAGATTCATTCTC TTCTATCCCAGAAGAGGGAAGGGGAAAGGAGAATAGGTCATCTAGCAACTTAGTGAAAGATAAGCAATCTCCAGAAAAGA AACTGGGTAAAATCATTACTCCAGTAAAGAGGTCTCCATTCAAACAAGAATCAGCTGAGAAGAGCTTGGATCACTTGAAG TTGCAGTTGGATTGGAGATTATCAGAGCAGGAAAGGGCACAGACTTCATCAAGTTCATCAGATGATAAAGTGTCAGAAGT TGATAGCACGCCCAATAGAGTTTCAGAGGATCTTGTGAAATGCTTGTCTAGCATATTCATGAGAATTAGCACATCCAAGG ACAAATTTGGGGAATCTAAGACGCCTTCGCGCTTCATATCAGCATTGAACCAATGCAGCAAGGAAAAGGATCAGTTCTGT GATCCTTATGGTATCTGTTCAGAATCTAAAACAAGAGAAGTTGGCCCTTATAAGAATGTATGTGAAGTTAAAGCCGCCAC GGTTGATTTCAACAGAACAACAAATGCAGTGTTTCTAATCCACAGATTAAAGTTCCTACTTGGGAAACTTGCCTCTTTAA ATTTGAAGGGCCTTAATCATCAGGAAAAACTTGCATTCTGGATAAACACTTATAATTCCTGCATGCTAAATGCATATCTA GAACAAGGCATACCTGAGAGTCCTGAAATGGTTGTAGCACTAATGCAAAAGGCAATGATAGTAGTGGGGGGCCAGTTGCT CAATGCAATTACAATAGAGCATTTTATCTTGAGACTTCCTTATCATCTGAAGTTTACATGTCCAAAAGCTGCAAAAAATG AAGAGGTGAAAGCACGAAGCATATTTGGCCTGGAATGGTCTGAGCCTTTAGTAACATTTGCACTTTCCTGTGGAAGCTGG TCTTCACCTGCAGTGAGAGTGTACACAGCATCAAAAGTTGATGATGAGTTAGAAGCAGCAAAGAGAGACTATTTACAGGC TTCAGTTGGCATTACAGAAACAAACAAGTTAATAATCCCCAAGTTACTGGACTGGTATTTACTAGACTTTGCAAAGGACC TGGATTCTTTATTAGACTGGATCTGCCTCCAACTACCTGACCAAATAAGAAACCAAGCAGTTAAATGCCTTCAAGAAAGA GGAACAGACTCGGTTTCACAGAGGGTACAAATGATGCCCTATGATTTCAGTTTCCGGTTGCTTTTACACCAATAA
Protein sequence (LotjaGi4g1v0106900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGGGNRTMAGGRRSNRERKMALLQDVDKLKRKLRHEENVHRALERAFTRPLGSLPRLPPYLPPYTLELLAEVAVLEEEV VRLEEQVVNFRQGLYQEAVYISTKRNAENLSDPIDQTPIRSSKHQRSKSMSQSEFNSTMITTRLPQPSLARSASSRKLLF SSDTVTDQTAGKLAHGKQLHRKQDSFSSIPEEGRGKENRSSSNLVKDKQSPEKKLGKIITPVKRSPFKQESAEKSLDHLK LQLDWRLSEQERAQTSSSSSDDKVSEVDSTPNRVSEDLVKCLSSIFMRISTSKDKFGESKTPSRFISALNQCSKEKDQFC DPYGICSESKTREVGPYKNVCEVKAATVDFNRTTNAVFLIHRLKFLLGKLASLNLKGLNHQEKLAFWINTYNSCMLNAYL EQGIPESPEMVVALMQKAMIVVGGQLLNAITIEHFILRLPYHLKFTCPKAAKNEEVKARSIFGLEWSEPLVTFALSCGSW SSPAVRVYTASKVDDELEAAKRDYLQASVGITETNKLIIPKLLDWYLLDFAKDLDSLLDWICLQLPDQIRNQAVKCLQER GTDSVSQRVQMMPYDFSFRLLLHQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 584 | 575 | 7.6E-237 | – | |
| PANTHER | 10 | 584 | 575 | 7.6E-237 | – | |
| Pfam | 16 | 97 | 82 | 1.7E-21 | ||
| Coils | 20 | 47 | 28 | - | – | |
| Coils | 66 | 93 | 28 | - | – | |
| MobiDBLite | 110 | 148 | 39 | - | – | |
| MobiDBLite | 167 | 233 | 67 | - | – | |
| MobiDBLite | 177 | 219 | 43 | - | – | |
| MobiDBLite | 250 | 265 | 16 | - | – | |
| MobiDBLite | 250 | 271 | 22 | - | – | |
| Pfam | 376 | 505 | 130 | 9.7E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0106900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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