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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0120700 |
| Transcript ID | LotjaGi4g1v0120700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 7 long form isogeny; TAIR: AT1G17930.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|Q9LMT7|MAIN_ARATH Protein MAINTENANCE OF MERISTEMS; TrEMBL-Plants: tr|A0A0S3RPZ5|A0A0S3RPZ5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0120700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:17452352..17456570) extracted from Lotus japonicus Gifu genome v1.2.
TATCTGGAAAGCCTTCTCCCAATTGGAAAAAAAACCCTAGCCTCCATCTCCCACCGGTTTCAGTCTCACCACCGGCCAAA CCGTACCCTCCCACCACCATACTCACTGTATCACGAAGGAGAAGAAAGAAAGAGGAAGAAGGAAAAGGACGAAGGAGCAA AGGAACAAGAAAGGAGGAAGAAGAAGAAAGAAGGAGCAACGTAACTGATATGGTAAGTCCCCCTTCCAAATAGCCTCCCT TTTCGTTTACCCTGATGTTGAATGTTGGATCCGCAATTTAAATAGCGGTTGTGTTATGCTTACCACTATTTAAATTACGG TAGTGTTATCGTAACCTTGATCTGTACCCACACCCTGTTTGATGTACTCGCTATCAAAATAGCGGACGCTTCCGCAATCA TAATAGCGGTAGCTTCCACTACTAAAATAGCGGTAGTTTTCGCAACCAAACTAGCGGTAGTTTCTGCCATCAAAATAGCG GTAGTTTAAATTGCAGCCAAGTTTTTGTTTTCTGTTCAAGTCATTCGAGCACACATCTATTTCTTCCTATAAACCATGAA CCATACTCACGTACGTCTCAAATACCCAAACTGTTGATTCTGTTCTAAAATTCACACAAGGGACAAGGTAGAATTAACGT GACTACCAACATTCAGTCCTTGACAACATTGCATGTCTTATAGTTGTGTGGTAAAATCTTCCTTTAACCTTAAGTGGTAC TTTTCTGTAACACAAGACACCAAAGCATTCCTCCATTTTATCCACCTTGCTCGAATCTTATGGTTGGCATCTCTATTTCA CCATCATTTTGTATGATGGATCCAAGATAATTAAACCATAAGACCAGTGTCTCTAAGCTAAAATTCTTGTGTCTCATGTT AAACCTGTACTACATATACTTCTGTTTTACCACTACATAAGAGAAAGTTTTGTGCTTCCAAGGTTTTCTCCATATCTTTA GTATAACTCCGAGACTCATGAAAAAAGTATATATGGTGATAACATTTCTTGAATATGTTTAGTTAGCAAATCTAGACCAA AATAAAACAATAGACTCAATGTTGACCATTGGTACAAACCTATAATTGAAACCTTTTGTTCTCACACTACTCATGACCTC CTTATACATATCTTAATTGCTTGAATGTGTCCAATGCTGACTCCTTTCTTCTCTATAGCCTTCCAAAAAACCTCTTCATA AATTCTGTCTTGTCTTTCAAATCAATGAAAACCATGTCCATGCGTTAATATTTTTATTCCTCCAATATCATTCCATAATC TTCACAGCAAGTATATAGCTTCTGTGGTCGACCTCCTTGGCATAAAACCAAATTGATTTTTTGTAATAAGTTTGTCTTGT CTCAATCTTTACTTGATTACTCTCTTAAAGCTTCATAGTGTGGCTTATGAGCCTAATCTCCCTATAATTAGCACAATTTT GAACATCAAAATTAAAGGCTGTGAAACAGTTGATATATCTGTTAATTTTGATGATCTACAATTTACATATATACCTAAGA AGTGATCTTAGATATATAGTAGAAGCAACTTTTGATAATCTCAATTTTGAAGTTGAATGAGACCACACCTCAAGCTACTT TCTTCTACCATAATGTTTGTTCTTATCACATCACATCACATGTATCACATTTATTAATTTTTGGTTGTCTTAGAGTAAGA CTAGTTTATGAACCTGGTAGTTGTCATTTTGTACATGCCCAGGTTGTTGATTGTTGAATATGTTTCTCTGAAATGGATAA GCTGGTAGTTGTACATAGCCAAGTTTTTTATTATGTTCCTGATTTTGGGATTTGCTTTGTTAACAAAGGCATGGCGAGAA CAAAACAAACAAACCGCGTTGTGGGAAAGGCTTCACAACCACCTCATCCTCCACGAGACCGTTCGAAAACTCATGCTTCG GCTCGCCGAAATCGTTAGGGGACTCAGGGTATGGGAGATGAAGTTCAGGAGGGTGTGCTGATTAATGCACGACACTAGGA AGCGGTGAATGCTGATATTGAGGGTGCTCAAGGAGATTATGCTGGTTCGGAGTATGAGAATGATAATGAGAATGAGGTTG AGATAGATTATGAGGATGGTGATGGTGAGCAGGATGGAAAGTCTAAGGATGATGATGGTCATGATGATGAGCAGGATGGA GAGTCTGAGGATGGAGATGGAACGGAGGGTGTGTGGTATCCTGGAGGTCCCTATGACTTGTCTTTGTTGCCTAAGTTTGG ACAACACATAGCACATGACGTCTGGAAGTCATACATCAACCCTGAGTTCCAATGTAGGGGTCCATTGAAGATCCATCATC ATGGAGAACACTTATATCCTGTAAAGTTCTACTCCAAAAAAGTGAAGGAACTTGTGGCAGATGCAGGGTTATTACACCTT CCGTATAGTTGTAATGGCGGCTCAGTTGACCTTAGCATCGTGACTGCCTTTGTTGAGCGATGGATGCCAGAGACGTCCTC ATTTCATATGTCGTGGGGCGAGATGACGATCACTCTGGATGACGTCTCAGCTCTATTGCACATTCCTGTGGAGGGGTCAT TTTTCTCATTCGGCAAGCCGACTAAGGAAGAGGCTTCCCTTATGGTTGTTGATTTGCTGGGGGTGGGAATTGAGAAGGTG GAGGCTGAGTTTCGGAAGTGTAGAGGTCTTAGTCTGCGGTATGCTTGGCTTCTTCAGCTTGTGGTGGAGCATGTGAAGAA AGAGAAATGGACAGAAGCAGCCCGAGCTTACCTGTTACGCTTGGTTGGCATGACTCTCTTTTGTGATAAGAGTAACATGT ATGTCAATGTTGCCTATCTTGAGCTTTTCAGGGATATTAGCTTGGTTGGTCAGTATGCTTGGGGTGCGACCGCGTTGACA TATTTGTATTGCCAGTTAGGGGAGGCTTGCAAAAAGTCTGAGAAGACAGTTGCTGGGTATTTGGGTTTGCTACAGGTCAA CATTTGACTTATTTGTTGCTAAGTTCATTTGTATTTTTCGTATTTTAATACTAACACCTTAGAGTTGCAGACGTGGGTAT ATGCACGCTTTCCTGGGTCGCTGTTTGAGAGGTCGAAGTTCCATAGCTACAAAGATTATATGCCTGTGGCTAGGAGGTGG TTGGCATGCAGTGAGATAAAGAAAGTGGAGCAGAAGAGACTTAATCTTGTTAACTTCCCTGCTGGTGGAGTGATTTGGAG GCCTTATGTGGACATTATGTTCATCGTCCATTTGAACATGTCTCACTGTATAGTGGATTCATCAGGTTTAGCAGCTCAGT TTATCCATACCTACCTAAGCGTGTATCCAGGCAGTTTAGGATTGTGCATTCCAAGCCTCGAGGCCCTCCAACGAAAGTTT CATGCGAAGATTGTGATGCTATGTGGATGGATTGGCGGAGCCATACTATTAGAGGAACCTATGTTGATTACCCCCACGAG TGTGCTGCTGAGTACAATGACTGGTACAAACAACACTCACATCCTTTCCTGATTCCTGAGGAGATGAGAGTTGACCGTTG GTCATTTCTTGAGGTTGGTTAAATTTAACCTTGTACATCAACATAATCACTTTCTTGGAATATTAACTTGCGAATATTGA CACTTTCTTGGAATGTTACAGGGTCAGATTGCTTTGCTGTCGACATACTCTACTGTTGCTGTTGATCTAGAGACTGTTGG GGCACCCGCATAGGGCACAACCATGTGGGATGTAGTTCATACTATGCATTCCATTATTCATAATACATTGCAGGGACAGG AGGAGCCATGACAACGGAGAAAGAGGAGGAATGCTAGCGGGATTGGGACTTCAGCTGATTATGAGTGATGCTAGTGTTTA TGTTGTTGGACATGGATGTGTTTATGTTGTTTATGTTGTTGGACATCTTTGTTTATGTTGCGTATGTTGTTTGTGTTGTT GGACATGGATGTGTTTATGTTGTTTATGTTGTTGGACTTTGCTAGTTGTGTATATGTTTATGGATCTTGAACTGGATATG GATCAACCTCTCTTTTCTCATAACAACATAAACATAAATAGGAACATATCGCTTAAGAACATAAATACGAATATAGTCAT GAAAGCGGTTTACATAAGGTCTATTACATAATTTAGAATGCCCATAAATTCACTAAGATCTATCACATTACAACAATTAT TAATCCTCACCAAGGTCTATTACAGAGTGATCACCACCACCATGTTTAGCGGTAAGATA
CDS sequence (LotjaGi4g1v0120700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGAGACGTCCTCATTTCATATGTCGTGGGGCGAGATGACGATCACTCTGGATGACGTCTCAGCTCTATTGCACAT TCCTGTGGAGGGGTCATTTTTCTCATTCGGCAAGCCGACTAAGGAAGAGGCTTCCCTTATGGTTGTTGATTTGCTGGGGG TGGGAATTGAGAAGGTGGAGGCTGAGTTTCGGAAGTGTAGAGGTCTTAGTCTGCGGTATGCTTGGCTTCTTCAGCTTGTG GTGGAGCATGTGAAGAAAGAGAAATGGACAGAAGCAGCCCGAGCTTACCTGTTACGCTTGGTTGGCATGACTCTCTTTTG TGATAAGAGTAACATGTATGTCAATGTTGCCTATCTTGAGCTTTTCAGGGATATTAGCTTGGTTGGTCAGTATGCTTGGG GTGCGACCGCGTTGACATATTTGTATTGCCAGTTAGGGGAGGCTTGCAAAAAGTCTGAGAAGACAGTTGCTGGGTATTTG GGTTTGCTACAGGTCAACATTTGA
Protein sequence (LotjaGi4g1v0120700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPETSSFHMSWGEMTITLDDVSALLHIPVEGSFFSFGKPTKEEASLMVVDLLGVGIEKVEAEFRKCRGLSLRYAWLLQLV VEHVKKEKWTEAARAYLLRLVGMTLFCDKSNMYVNVAYLELFRDISLVGQYAWGATALTYLYCQLGEACKKSEKTVAGYL GLLQVNI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 2 | 165 | 164 | 1.0E-32 | ||
| PANTHER | 3 | 165 | 163 | 4.1E-32 | – | |
| PANTHER | 3 | 165 | 163 | 4.1E-32 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0120700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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