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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0125100 |
| Transcript ID | LotjaGi4g1v0125100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein DnaJ; TAIR: AT3G51140.1 DnaJ (DUF3353); Swiss-Prot: sp|Q9FN50|CPP1_ARATH Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic; TrEMBL-Plants: tr|I3T709|I3T709_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0125100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:18231830..18236246) extracted from Lotus japonicus Gifu genome v1.2.
AGAAGCTTTTTCATTCCTCTCTTAAATGTATTGTGTAACTGGATAGACTCGGTAAACAATAACACTAACCCGACAGAAAT TATGTAATTTGATGAAATAAAAATAAAATTATCGAGCGAAGCAGGGTTTTGGTGTAGCCCCTATCCGTTGGAGTTCCCAC CCACCCCGACGAAAGGAACCCCCACCGTCTGAACACTCCTCCCTCCTCTTCTTCACGCTAAGGTACACTTTTCACTTTTA ATTATACCATAATTATACCATTCAGCGTCTCGATTCAGTTGCACACATTCAATTGCATATGCAATTGCTCCATATTTTCA TATTTCAGATGCTTTTTTTGTGTAATTAATCTGCTCATGAATGTTTTGTTTTTTTTTTCCCTTTTATTTTACGATTGTTA CAAAGTTCTAATTTATGCCCAATTGCTTCGGAACTATCATTTTCTAATCAAACTTCAAATGGGTACCCACACCTACTTCA AAGTTGTTGACTTGGGTTATACTAGCACTTTTATCACTATTCTTAGTTAGAATCAACTTGGGGATATTGTACTTGCATCT ATGGTGGTAATAAGGTGTCTATAATCTTATCTTTTCGTTGTTCACTGCTGGATCTGTTGTTTACCTTGCTAGTACTGAAA TTGCATTGTGAGGAATGAGCTGATAGAATGAGTTTATTCTGAACAACTCGAGGGCATGACGATTAAGCTGGATGGGGTGC GTTTGGATAAACAACTTAATTAAGCACTCATGACAATAGATGCTTATCGCATAACTGTTTATTCATAAACTAATTTGAGA AAATTATTGAAATAAGCTGAATTAGGTTATAGGTAAGCATAAACTCTTATTCATAAGTTGATATGAACAAGTTATGAAAG TAAGCTCAAAACAACTTATAGTTAGGCCCTAAACTATTTACGTAAACTTTGCCAAATACTTGCATAAGCGGTTTTGATAT AAGATATGGTCAAATAACCTCTTCCTTACAACACACTAGTTCCTCAAGATAAAGTTATGGAATTGGAAAGTTAAGTGACC GACTTTTGGGTTCTAAGAATTAGTAGATTAATTATACTATTGAAGCAATAGGCTTGTATAACTCTATGGCATAATTATTG TATTATTATATCCGATGTTAGTCTCTTTGTGGGGAGTTGTTGATTAGTCCTCTTTCTGTTTGAATTGTGAAGCATCAAGC TGTGATCTCAATTCTTCTTATAAGGCGTTAGCAGGCTGAGTCAAATTGCCAGAAGATTTTAGTAACAATGACTGTATCTG GGTTGAGTGGTTGTCTTTCAAGATGTCCCCATTTACCTCCTGGTTGCTTGGCATCACCCCATGTCCGGGTTATGGCCTTA TCTGTGGCTGGGAAACGTAAACAAGGGACAATGTGTCTCCGAGTGGAAAGGTATGCCCTAATACCCTCCTGAACTTGGGA TTATGATGTAAGGCTTATCCTATTTAGAATGGTGGATAATTCATTATTTTCCTCACTTTGTCACTTCACAGAACAAGTTT TTCATCTCCTGTATTAAAAGGAAATAGACGACAAATCCAATTGGTCAGAAGTGCCATGGATGCTTCATTTGGTGATATGG CAAATGATTCTACTGGTGACTTTTCTCTCTTAATGAAGCTAATTTCTTATGTTTCATGAATCACGATACTGAAATTTTCA TTGCTACGGCATGATCTTGTGATACTAGAATGTAACTTGGATAGTACATTTTCTAAAACAATAGGTTTCTTAAAAATAAA ACTAAACTTGAAAATAATCCTGTGATCATCACAGATGTTTGGTTCTCTCATGGATGCTAGACTATTAATTCATTGTGTTC TTGTTCATTGGTTTGTATTGTTGAAGTCATCTCTTCCTTTTCATACACCATTCTGATAGGTAACCACCCCTTAGCTACTT TAGTTAGTCAATCAGTTAGAAAAATCATATGGTTAGTTAGTGAGTTGGTTAGAGATTAGAGAGAGTGAAGAGATATTATA AATAGGAGGGTGTTGAGAAGGATTAGCTCTAATACCAATTGATAGAATCAGCCAAGAAAAAGAAGGGAAACTGTTATTAT CGAGTAAGAACCCTAATTCCCAATTAGGGAATCAGAGAACGATACATGAAACAGATGAGTATTCAGTCTCCTAAGTCCCA ATTACACAAATGATCCGAAGGATCCCTAACACTCCCTAAGCCACACTCTTATTTATAGGCAGAGACCTCACTAACCTCCA AACTAACTATCTGTATGTACCTATCACATTCATTATTTTAGATAATCAGTCACACCTCTCATTATTTTTCTTTTTCTAAA AGATACATTTCTAACAAGCTTAAAACTAAGTTTGTTTCAACTTGAGAGGAAGTGTTAGAATATTAAAGACATCTTATAAT ATATCTTGATCATGTCTTAGAGTTTAGGGTAATTTAGATTATTCTTTAGGATTGGTTTCTTTATTTCCTTAAGTATATTA ATTTATTTCCTTATTTAAATAGGAACAAAGTCTTAATTCGTTACCTTATTTAATAAGGATAGGAGTCTAATATTAATATA AACAAGGGTTTGCCTTTTACAAGATCAAGCCCAAAGTCCAATATACTAACATGAATACAATTTTATTTTATACTCGGTTC CTTTTTCCTCTTTCTATACCTGAAAGACTATCCTATATTTTCTTCAAACTATTTCCTATCTTCCCCACTCCTGAAAATGG ACCTCACATCACATGTTAAATTTTCACATATGACATTGTCATGTTTTTTTTATCAGCATGATATTGTCATGTGAAAATTT CATGTCTCTCTCTCGATAGTTATTCATCGATTTTGATAGAAACCTACTTGCTATGACGAGAGAGATAGACACAATTCCCA CATCACCTTATCTTGTGAAAGTCTAACATAAAATGATCCATTAAACCTTTTTTGATGAAATCTGGAAACGCGTATACTTG CATGTCTCAGTAGGATCCTCTCTCAGTTATCCATTTCACAGTAATTAATAACTTTTAATTGTTTTCACCTCATGCTTACT TGAACCCCTTATATTAAACCAATAATATCTAATGCTTAGCTTATCATTTTGCTGCTCCTTTGTTACATGCAGCTGTTTTT CCAAGAATTAATGTGAAGGACCCATATAAACGACTTGGAATAAGCAAGGAAGCTTCTGAAGATGAAATTCAAGCAGCAAG GAACTTTTTAATTCAACAATATGCAGGGCACAAGCCAAGTATGGATTCAATTGAGTCAGCGCATGACAAAATAATCATGC AGAAGTTCTATGACCGTAGGAATCCAAAAATTGACTTTAAGAAAAAAATGAGGGAAGTCAATCAATCTAAATTTCTTCAG GCTATCAGAGGAAGATTTCAGACTCCATCCACAAAATTCATTATAAAAACTTCACTAGTATTCTTATTACTTGGAGTTCT GACAGTTCTCTTTCCGACTGAAGAAGGGCCAACACTTCAAGTAGCGCTATCTCTGATCGCTACAATATATTTTATACATG ATCGTCTGAAGAGCAAGATACGAGCTTTCCTTTATGGGTATGTTAACAGTGATGTGTCTCATTCTCTTAAATTTTTTTAT GCATTTACTTCACTAGACATAGGGCGAGCTTCGGCGCAACGGTAAGGTTGCTGCCATGTGACTTTGCAATCACAGGTTCG AGCCATGGTTTCAGCCTCTTGCAAAAATGCAAGTAAATGCCGCTCCATAAAATGGGTCCGGCCACTCCCTAGACCTTGGG CATTGCAGGAGCTTTATAGCACTCGGTTTGCTTAAAAAAAGATTGCTAGACAATATTCTTTGTTAGATTAACCATGATTG AGTACTTTTCATATTGAAAGCATTACTTATCACCATTTTACGGCTTTGTGATATGGATTGCATTGTGCCCTTCTCCCTTT AAAATTTGATGCATTCATGGTATTCCTCCCCTCAGCTCGTTAGGTTCTTATATATTTTGGTGCTTTGTTGCAGGGTTGGA GCATTTATTTTTTCGTGGCTGTTGGGAACCTTCTTGATGGTGTCAGTGATTCCTCCTATTCGAGTACTTAAGGGACCATG CGCATTTGAAGTGATCTCGTCAGTGTTAAGTTATGTTTTTTTATGGGTTTCATCGACCTATCTTAGATGAAGGCTTCAGC TATGTATCTCAATTTGACTGCTGGGTGATTTTAGCATAAGACCAGTTTTGCAGTGGACTTTTCACAAAATGTTATGGCTT AATATATTTAGCGGTTAAATTATGCCTTTTTTTTAAGAAGAAGAAAATAAGACTTTGATATCATTTTGGTGAATCTACGG TCTTTTTTATTCTTTCTCGGTTAAGTTTTTTGAATGAGCAAACATATTGGAATGAGCAAAGACAGATTTCTCTTGCAAAC ACAGCTATACATGCCAG
CDS sequence (LotjaGi4g1v0125100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGTATCTGGGTTGAGTGGTTGTCTTTCAAGATGTCCCCATTTACCTCCTGGTTGCTTGGCATCACCCCATGTCCG GGTTATGGCCTTATCTGTGGCTGGGAAACGTAAACAAGGGACAATGTGTCTCCGAGTGGAAAGAACAAGTTTTTCATCTC CTGTATTAAAAGGAAATAGACGACAAATCCAATTGGTCAGAAGTGCCATGGATGCTTCATTTGGTGATATGGCAAATGAT TCTACTGCTGTTTTTCCAAGAATTAATGTGAAGGACCCATATAAACGACTTGGAATAAGCAAGGAAGCTTCTGAAGATGA AATTCAAGCAGCAAGGAACTTTTTAATTCAACAATATGCAGGGCACAAGCCAAGTATGGATTCAATTGAGTCAGCGCATG ACAAAATAATCATGCAGAAGTTCTATGACCGTAGGAATCCAAAAATTGACTTTAAGAAAAAAATGAGGGAAGTCAATCAA TCTAAATTTCTTCAGGCTATCAGAGGAAGATTTCAGACTCCATCCACAAAATTCATTATAAAAACTTCACTAGTATTCTT ATTACTTGGAGTTCTGACAGTTCTCTTTCCGACTGAAGAAGGGCCAACACTTCAAGTAGCGCTATCTCTGATCGCTACAA TATATTTTATACATGATCGTCTGAAGAGCAAGATACGAGCTTTCCTTTATGGGGTTGGAGCATTTATTTTTTCGTGGCTG TTGGGAACCTTCTTGATGGTGTCAGTGATTCCTCCTATTCGAGTACTTAAGGGACCATGCGCATTTGAAGTGATCTCGTC AGTGTTAAGTTATGTTTTTTTATGGGTTTCATCGACCTATCTTAGATGA
Protein sequence (LotjaGi4g1v0125100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTVSGLSGCLSRCPHLPPGCLASPHVRVMALSVAGKRKQGTMCLRVERTSFSSPVLKGNRRQIQLVRSAMDASFGDMAND STAVFPRINVKDPYKRLGISKEASEDEIQAARNFLIQQYAGHKPSMDSIESAHDKIIMQKFYDRRNPKIDFKKKMREVNQ SKFLQAIRGRFQTPSTKFIIKTSLVFLLLGVLTVLFPTEEGPTLQVALSLIATIYFIHDRLKSKIRAFLYGVGAFIFSWL LGTFLMVSVIPPIRVLKGPCAFEVISSVLSYVFLWVSSTYLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 177 | 177 | - | – | |
| PANTHER | 5 | 282 | 278 | 6.5E-133 | ||
| PANTHER | 5 | 282 | 278 | 6.5E-133 | – | |
| Pfam | 102 | 281 | 180 | 6.0E-50 | ||
| TMHMM | 178 | 197 | 20 | - | – | |
| Phobius | 178 | 196 | 19 | - | – | |
| Phobius | 197 | 201 | 5 | - | – | |
| TMHMM | 201 | 218 | 18 | - | – | |
| Phobius | 202 | 218 | 17 | - | – | |
| Phobius | 219 | 226 | 8 | - | – | |
| Phobius | 227 | 250 | 24 | - | – | |
| TMHMM | 227 | 249 | 23 | - | – | |
| Phobius | 251 | 261 | 11 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 262 | 281 | 20 | - | – | |
| Phobius | 282 | 282 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0125100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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