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LotjaGi4g1v0129100.2

Overview

Field Value
Gene ID LotjaGi4g1v0129100
Transcript ID LotjaGi4g1v0129100.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Oligopeptide transporter, putative; TAIR: AT4G10770.1 oligopeptide transporter 7; Swiss-Prot: sp|O82485|OPT7_ARATH Oligopeptide transporter 7; TrEMBL-Plants: tr|V7CDB8|V7CDB8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0129100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:18833253..18839993) extracted from Lotus japonicus Gifu genome v1.2.

TTCATTAAAGTCTATTTAAATTTAAAATATATGAATGATAAACGTTAGTAGCTTAACAACACCATAGCTTTGGTTTCAAA AATATCCCAAAATTTTCAAAGCTCAGAGCAACATGGATGATGACCACGAAATCAACGCTCCTCTAAGTACGTTTGCACCT TTAACACTAACTTTCCCTTTTATCTCTCAAACGCTAACTTAATCACTTCCTTTTCCGTTGACTTTCAGTTACAACCCACC GCAGCACCACCAACCACGCTACCACTTCCGGCGACATTTCCCCCTCACCGGCCGGCGAAAATTCCCCAATCGAGCAGGTG GCGCTGACAGTCCCAGTAACCGACGATCCTTCTCTCCCTACCTTCACCTTCAGAACATGGATCCTCGGAACACTCGCGTG CGTCGTCCTCTCGTTCCTCAACCAATTCTTCGGATTCCGCCGCGAGCCGCTCTCCGTCACGGCGATCTCGGCGCAGATCG CCGTGCTACCGCTGGGACACCTCATGGCGTCGACGGTGACGGATCGAGTGTTTTTCAGGGGGAAGAGGTGGGAGTTCACG CTGAATCCGGGGAGGTTCAACGTGAAGGAGCACGTGCTCATCACCATCTTCGCGAGCTCCGGTGCGGCTAGCGTCTACGC GATTCATTTCGTGACGGCTGTTAAGGTGTTTTACCGGAAGGATATGACGGCTGTGGTGGCGTTGCTGGTGGTTGTGACGA CGCAGGTTTTGGGGTTCGGTTGGGCGGGGGTTTTCCGGCGGTATTTGGTGGAGCCCGCTGCTATGTGGTGGCCCCAGAAC CTCGTTCAGGTCTCGCTTTTCAGGTACGTATTCGTATTCGTTGTTTTTCTTTTATGTGAATTGATAGTTTTCTCGTGAGT AGTGTAGTGCCTAGAATTTTGGTCTACGTTTTCTAGTCAAACTTAATATTTTTATGCTGTGTTTGCTTTGGAGGGAAATG AGAGGAAAATAAATAGAAAGAAAGAAAAATAAAGAATATGTGAGGAGAGTGAGAAGATTTTGTGGTACATTGGAAAGATG GAGAGTGAGAAGATTTTAAGTTGTTTGTTTGTAGAAATTTAGGGAAATAAAATAATTCCATAAAAATTTCTATTTATTAT TATCAGACTTACTAATTCATTAAAGTTCTCAATTTATATTTAATTATTTATATTTATATCTTATAATATAAAAAGTTATT TATTATTATTACTATTCATCTACTTTTTTTAAGAGATTAATTTCTATGCACCGACGGTGTAAAAAGTTTTACACCATCAT TCAATCACAACCTTTCATTTCCTATTTTTAGATATTCTTAAATTCAAAATTAATTGTAAGCTAACAAAATGGAGGGATGT AATTGAATGATGGTGTAAATCTTATTTACACCGTCGGTGCATAGAAATTAATCTCTTTTTTTAAACGTATTCATCTACTT GAGCACGGATAAATTTATTCAGTTATATTATTATCAACCCTAAAAACGCTAGTTATAGGTGCCCACTAGGGTGAGCTATT TTTAAATTGGTCCACCGGTGCACCCATGGTTATATTAGTAATTTACAAAAGCTAAAAAAAAATTTAAACCAGAAACCCTC AGTCACGCTCAAGCATCTCTCTCAATTTCTTCTTCTTCTGGCAGCAGCCCCCACCACCATGGCCTTCCTTCTTCATCTGA GAAGTTTCTCTCCGGCCGCACCACCGCCACCACCGTCGATGAGCTCTTCGCCGACGGCGTCCTTCTTCCCCTCCACAACT AAACCCGACCCGACACCCAAGCCTGACCCGGAAACTCCCACCCCAACGCCTGACCCAGAACCCTCCCCTGCAATCACCGA CTCTGTAACCACCACCCCGTTCCCCTTTCCATAATGTTTGACGCGACCTGGATTTGCGATCTGCGTTCGAATCAAACTCA GATCTGGGCTTGCGATTTGAGACCTAGGTCTCGATTTGGGTTTGAATCAATCGATCTCTGAGCTCATATAGAAGGGCTTT TCACCACATATGAAGGATGAAAATATGGGTTTTGGGTTAAGGTTCTCCTCCACTCTATCCCGATATGGGTTCTAGGGTTT GAAATTGGTGGTTTGGAGTTTATGTTTCTTATTCTTCCCTTTTCCCTGTTGTTGATATGGATTATGGTATGGATGATTGA GGTTTTTGTCTTGGCGATTGATGGTGATTGTGATGCTGGAAAATTTTCTTCACGTTTCCGCTATCTCCAGCCCCAAATCA GAGTTCAACCATGGAGAAATGGAGAGAACCACTGTTTAAAAGTGAAATCGTGGAGACTAGTGGAATTATGGGCATTTGCC CTGTACCGCGGGTTGGATGGAGAGTGAATTTTTGAGAGAGGAAAGTTGGAGAAGAAGGGAACGAGAGTTTTACGTTTTTA TCCTTTTTACATTAACTCAATCCTAACCACCCATTTTTAGAATATTCTAAGATTCCTTCATCCAACGGTTCTTAGGCCTT GGTCCACCGGTGGACCAATTTAAAAGTAGTCCACCCTAGTGGGCACCCTAGTTATACTGTTAATTATTTTTTAAAAACAC AACCAATCAATAGAAAAACCACAAAGATGATTTGACACTAATGCGCCACCTATTGAAATATATAACAAGGAAAGAGAGGG GTAAATATATGATGTGTATTTTGATAGAAAAAGAAAGAAAGAAATAAGAGCAGAATTTAGAGAAATTGAGATGGAAGAGA ATGATGATGTTAATAAATTAAATGTAGAAAAATAAATTTTTAAAACTTTCACACACACAGAGAATACATGATAAGCATAA CCAGATGTTTTGTAATTTGGAGATTTTAATTCTTTTACACCTAACTTTTTTCCATTTCTTTATATCTCTCTTTTAATTTT TTTATAACATTATTTATCATATTTCTTATTTTTTCATATCTCATAAGTGGTAGTGAAAAAAGAATGTGAAGAAATTTTCC TTTTGGGAGGAAAAGCCCCCTAGCATGAGAGATATTATGCTGAGGGTGTTTTGTCCGTTAAAAAACAGATTCTCTCATTT TCTGCCCAGTAGTGGGTGGAAAGAATCTAAAGATGGGCCCCACCAAAATTAATCCAAACATAGGAAAGCTTCATGCCTTT TTCTTTCTTTTATTTCTTTCTCTCATTTTCTCGTATACCAAACATAGCATTAGTATCTTTCTGTCTTTTCATACCCTGCT TAGTATATTGTTTATATTTTTATAAAATTTTACAAAAAATGCATTTAAAGAAACATGGTTATTTAATTAAAATTCACCAA TTTCTCATGTCATAATTTAATTTGAACTAAAAAAATATAGCGATATGATGAAGAGAGTTCAACTTATACTAGTTTTTTTG TTATCCTATGACACTCATTATTATTCATTGATTTCTTTTAGATGTGATGGTTCAAATGTATCAAACATTAGTGACTCACG TGATATTAGTTCAATCTAAACATCATGTGATGAGTCCACAGCCGTCACCCCCTTTCCCCTGGTTGGTGATGCAACACGGT CATCTCATCCAGTGGCCTCAAAATCAATTTCCTTCATGCTTATTTCACAAGAATTTCAAACTTGACATAGCATCCAAAAT TAGCAAACACCAATGTGGATACTCTTAAGTTACCAACTTGAGGGTCCTAGACTTTGAGTTAATTTAATCCTGTCAAATTT ATGAGCAATAGTAGTTACATAGTCTGCAAATTCCATGTTGTGCAATAATTTCTCAATTCATGCACAACACAATGGATTTC AGGGCGCTGCACGAGAAAGAGGAAAGGCCAAAAGGCGGGTTAACTCGGAACCAGTTCTTCCTCATAGCTTTCATTTGCAG CTTTGCTTATTATGTCTTTCCAGGCTACTTGTTCCCAATGTTATCCTCACTTTCCTGGGTCTGCTGGATTTTCCCCACTT CTGTACTAGCACACCAGTTAGGTTCAGGGTTGCATGGTCTTGGAGTTGGTGCTGTTGGTCTTGACTGGTCCACCATATGT GCTTATCTTGGCAGCCCTCTGGCCAGTCCATGGTTTGCCACGGCTAACGTTGCTGCTGGTTTTGGCATTTTCATGTATGT CATCATGCCCATTGCTTATTGGCTCAACCTTTACAACGCAAGAAGATTTCCCATATTTTCAGATGGTCTATTCATGTCCG ATGGTGAAAAATACAATATCTCAAGTATCATGGATTCCAAGTTTCACCTAGACATGGAGGCTTATCACCGTCAAGGCCCT CTTTATCTTAGCACCATGTTTGCTATGGTATATGGCATTGGTTTTGCTTGCCTCTCTGCAACCCTAGTTCATGTGTTTCT CTTCCATGGGAGGTAATTAAGTCACCCTTTAATGGTTCCACTATTTTTTTAACTGTTTCATTTGAAATAAACTTTGATGG TTGAAGCAAGTGATTTGATGGTGCAGTGAAATAATGCAGTTGAGTAAGTCTGCTTTCCAAGACAAGAAGATAGATATACA CACGAAGATCATGAGGAAGTATTACAAACATGTTCCTGAATGGTGGTTTGTTTGTATTCTTTTGTTCACTATCATGGCAA CTGTATTTATTTGTGAGTATTATACTGATCAACTCCAGCTGCCATGGTGGGGTGTGATTTTAGCCTGTGTTGTTGCCATA TTGTTTACTCTTCCAGTTGGAATACTCAGAGCCACGACAAATCAGGTATAGCCCCAATTTATCAGGTAGAAAAGTTATAC TACAATTTTATGACTCTGGAGCACCCTCATTTGGAGTCTCATTCTCTGTCTCACCAATTAAATTGTGTCATGTCATTTAA AAATCACATATGTAAGGTTTTAATCGCCTACATGACATAATTTGATTGGTGGACCAGAAATGCTGTGCCAAATGATAACA TAGGATCTTCATCCCCATAAACTTCCACTCTAGAAGTTTCCTGTTGTAAATAAATTACTGATTGTACCATAAATTTTGCC AAACTTAAAAGGTTGAATGTGAAGTCTTCAAAGTTCAAGAGCGCTTTTGCTACCTCTTATATTGAAAGTACTGCATATGA CCTGAAATAGTTTGTTTTAATCCACCTTATTATCGACAGTACTAACAGAATTTTTTCTTGCTGAGAAGGCACCGAGTTTG AATATCATCACAGAGTTCATAATTGGATACATTCGCCCAGGATATCCAGTTGGTGTCATGTTGTTTAAAGTGTATGGGAA CGTGAGTATGAAACAAGCGGTTTTCTTTTTGCAAGATTTTAAGCTTGGCCATTACATGAAGATTCCTCCTAGAGCAATGT TCATGGCACAGGTATGAACCGTTCTCCCTCATAAAAAACTAAAGTGAAAATAGACACAACTCGCACAAGTGACTCTCTTT TATGCTGTATTACATTTCTGCTACCAAATGGTCTTGTCTTGTTTGTAAGTAATTAATTATCTTTCCCTTTGCTTGCTCTG TTTCCTCTGCAGGTACTTGGCACCTTAGTATCAGCATTGGTACATTTAGTAACAATGTGGTGGCTCATGAACACTGTACC AAATTTTTGTGATAAAGAATTGCTTCCACAAGGTAGCCCATGGACTTGCCCAGGTGATCATGTCTTCTATGATTCGTCTG TGATATGGGGTTTGATAGGGCCTCGAAGAATTTTTGGTGATCTTGGACACTACTCTGCCATCAATTGGTTTTTCTTGGCT GGTGCTATTGCCCCTTTCCTTGTTTGGCTTGCACACAAGGCATTCCCTGAAAAGGAATGGATTAGACTCATCACTGTTCC TGTGCTCTTGGGAGCATTATCTGAATTGCCACCTGCTACAGCAGTGAACTACTCCAGTTGGATTCTTGTTGGATTTGCAT CAGGATTTGTTGCCTACCGTTACCACCGCGGCTGGTGGAGCCGCCACAATTATGTCTTGTCAGGTGCACTTGATGCTGGA TTAGCCTTCATGGGTGTTTTGCTCTACTTGTGTTTAGGGATGCAGCATATCAGTTTAGATTGGTGGGGCAGTGACTCGGA TGGGTGTTCCTTAGCTTCATGTCCAACTGCTCCAGGTGTTAAATCTGAAGGGTGTCCTCTTTACTAAGTAGATGAGATAT GTACAAATGTCTTCTAGCATGTTTGGATAAGCTTCTCTTTCTTCAAAATCAATTCTGAAACTCAGAAGCTCCTCACCAAA ATCGACTCTAACAAATCAATTTTAGAAGGATTTTCAAACATGCACTACATCATTCTTAATTCTTCAATGTGTAGAGGTTT TGTATAAATTTTGTAAATCATTGGATTCAATTGTGAATGTTAATGTAAGTTTGCTTTCTATATGTGAAGAGGCCTTGCAA TTCATTGAGTGGTATAACATTGCTCTCATAAGATATCTTAATAATGTAAGATGCTCATTGGCCCTGCTTTCCCTGTTCTT AGTATTAAATAGTACTACCTCGGATCCTATTTATACCCATGCTATTTATAAGAAACAAATGAGAGGTCTTTCATAAGATA TCTTAATTATGTAAGATGCTCATTGGCTCCTGCTTTCCATGTTCATCCTTCATTAGCATATTGGGTGAATTATTTATGGC TCATACTCAAGAGTTCTACATCAGGTTTGCTTCCTACACAGACCTTTTCTTTACTTTGAAAATATCCGTAATAGCTTTAA CGCATTGAGGTTCTATGTTATATTCCAAAAAACCAGCTGGCTTGGAATGATGCTTCTCTCAATCTGATAGCTTTGGGTTA CATTGAAAATTAATGCTTATG 

CDS sequence (LotjaGi4g1v0129100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATGATGACCACGAAATCAACGCTCCTCTAATTACAACCCACCGCAGCACCACCAACCACGCTACCACTTCCGGCGA CATTTCCCCCTCACCGGCCGGCGAAAATTCCCCAATCGAGCAGGTGGCGCTGACAGTCCCAGTAACCGACGATCCTTCTC TCCCTACCTTCACCTTCAGAACATGGATCCTCGGAACACTCGCGTGCGTCGTCCTCTCGTTCCTCAACCAATTCTTCGGA TTCCGCCGCGAGCCGCTCTCCGTCACGGCGATCTCGGCGCAGATCGCCGTGCTACCGCTGGGACACCTCATGGCGTCGAC GGTGACGGATCGAGTGTTTTTCAGGGGGAAGAGGTGGGAGTTCACGCTGAATCCGGGGAGGTTCAACGTGAAGGAGCACG TGCTCATCACCATCTTCGCGAGCTCCGGTGCGGCTAGCGTCTACGCGATTCATTTCGTGACGGCTGTTAAGGTGTTTTAC CGGAAGGATATGACGGCTGTGGTGGCGTTGCTGGTGGTTGTGACGACGCAGGTTTTGGGGTTCGGTTGGGCGGGGGTTTT CCGGCGGTATTTGGTGGAGCCCGCTGCTATGTGGTGGCCCCAGAACCTCGTTCAGGTCTCGCTTTTCAGGGCGCTGCACG AGAAAGAGGAAAGGCCAAAAGGCGGGTTAACTCGGAACCAGTTCTTCCTCATAGCTTTCATTTGCAGCTTTGCTTATTAT GTCTTTCCAGGCTACTTGTTCCCAATGTTATCCTCACTTTCCTGGGTCTGCTGGATTTTCCCCACTTCTGTACTAGCACA CCAGTTAGGTTCAGGGTTGCATGGTCTTGGAGTTGGTGCTGTTGGTCTTGACTGGTCCACCATATGTGCTTATCTTGGCA GCCCTCTGGCCAGTCCATGGTTTGCCACGGCTAACGTTGCTGCTGGTTTTGGCATTTTCATGTATGTCATCATGCCCATT GCTTATTGGCTCAACCTTTACAACGCAAGAAGATTTCCCATATTTTCAGATGGTCTATTCATGTCCGATGGTGAAAAATA CAATATCTCAAGTATCATGGATTCCAAGTTTCACCTAGACATGGAGGCTTATCACCGTCAAGGCCCTCTTTATCTTAGCA CCATGTTTGCTATGGTATATGGCATTGGTTTTGCTTGCCTCTCTGCAACCCTAGTTCATGTGTTTCTCTTCCATGGGAGT GAAATAATGCAGTTGAGTAAGTCTGCTTTCCAAGACAAGAAGATAGATATACACACGAAGATCATGAGGAAGTATTACAA ACATGTTCCTGAATGGTGGTTTGTTTGTATTCTTTTGTTCACTATCATGGCAACTGTATTTATTTGTGAGTATTATACTG ATCAACTCCAGCTGCCATGGTGGGGTGTGATTTTAGCCTGTGTTGTTGCCATATTGTTTACTCTTCCAGTTGGAATACTC AGAGCCACGACAAATCAGGCACCGAGTTTGAATATCATCACAGAGTTCATAATTGGATACATTCGCCCAGGATATCCAGT TGGTGTCATGTTGTTTAAAGTGTATGGGAACGTGAGTATGAAACAAGCGGTTTTCTTTTTGCAAGATTTTAAGCTTGGCC ATTACATGAAGATTCCTCCTAGAGCAATGTTCATGGCACAGGTACTTGGCACCTTAGTATCAGCATTGGTACATTTAGTA ACAATGTGGTGGCTCATGAACACTGTACCAAATTTTTGTGATAAAGAATTGCTTCCACAAGGTAGCCCATGGACTTGCCC AGGTGATCATGTCTTCTATGATTCGTCTGTGATATGGGGTTTGATAGGGCCTCGAAGAATTTTTGGTGATCTTGGACACT ACTCTGCCATCAATTGGTTTTTCTTGGCTGGTGCTATTGCCCCTTTCCTTGTTTGGCTTGCACACAAGGCATTCCCTGAA AAGGAATGGATTAGACTCATCACTGTTCCTGTGCTCTTGGGAGCATTATCTGAATTGCCACCTGCTACAGCAGTGAACTA CTCCAGTTGGATTCTTGTTGGATTTGCATCAGGATTTGTTGCCTACCGTTACCACCGCGGCTGGTGGAGCCGCCACAATT ATGTCTTGTCAGGTGCACTTGATGCTGGATTAGCCTTCATGGGTGTTTTGCTCTACTTGTGTTTAGGGATGCAGCATATC AGTTTAGATTGGTGGGGCAGTGACTCGGATGGGTGTTCCTTAGCTTCATGTCCAACTGCTCCAGGTGTTAAATCTGAAGG GTGTCCTCTTTACTAA 

Protein sequence (LotjaGi4g1v0129100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDDDHEINAPLITTHRSTTNHATTSGDISPSPAGENSPIEQVALTVPVTDDPSLPTFTFRTWILGTLACVVLSFLNQFFG FRREPLSVTAISAQIAVLPLGHLMASTVTDRVFFRGKRWEFTLNPGRFNVKEHVLITIFASSGAASVYAIHFVTAVKVFY RKDMTAVVALLVVVTTQVLGFGWAGVFRRYLVEPAAMWWPQNLVQVSLFRALHEKEERPKGGLTRNQFFLIAFICSFAYY VFPGYLFPMLSSLSWVCWIFPTSVLAHQLGSGLHGLGVGAVGLDWSTICAYLGSPLASPWFATANVAAGFGIFMYVIMPI AYWLNLYNARRFPIFSDGLFMSDGEKYNISSIMDSKFHLDMEAYHRQGPLYLSTMFAMVYGIGFACLSATLVHVFLFHGS EIMQLSKSAFQDKKIDIHTKIMRKYYKHVPEWWFVCILLFTIMATVFICEYYTDQLQLPWWGVILACVVAILFTLPVGIL RATTNQAPSLNIITEFIIGYIRPGYPVGVMLFKVYGNVSMKQAVFFLQDFKLGHYMKIPPRAMFMAQVLGTLVSALVHLV TMWWLMNTVPNFCDKELLPQGSPWTCPGDHVFYDSSVIWGLIGPRRIFGDLGHYSAINWFFLAGAIAPFLVWLAHKAFPE KEWIRLITVPVLLGALSELPPATAVNYSSWILVGFASGFVAYRYHRGWWSRHNYVLSGALDAGLAFMGVLLYLCLGMQHI SLDWWGSDSDGCSLASCPTAPGVKSEGCPLY 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 61 61 -
MobiDBLite 1 36 36 -
MobiDBLite 11 36 26 -
PANTHER 25 751 727 0.0
PANTHER 25 751 727 0.0
TIGRFAM 35 720 686 1.1E-177
TIGRFAM 42 716 675 7.3E-206
Pfam 57 714 658 8.5E-168
TMHMM 59 81 23 -
Phobius 62 79 18 -
Phobius 80 90 11 -
Phobius 91 113 23 -
Phobius 114 133 20 -
TMHMM 133 155 23 -
Phobius 134 160 27 -
Phobius 161 165 5 -
TMHMM 165 187 23 -
Phobius 166 187 22 -
Phobius 188 227 40 -
TMHMM 228 250 23 -
Phobius 228 261 34 -
Phobius 262 272 11 -
TMHMM 272 294 23 -
Phobius 273 293 21 -
Phobius 294 299 6 -
Phobius 300 324 25 -
TMHMM 301 323 23 -
Phobius 325 369 45 -
Phobius 370 397 28 -
TMHMM 375 397 23 -
Phobius 398 431 34 -
TMHMM 429 448 20 -
Phobius 432 453 22 -
Phobius 454 458 5 -
TMHMM 458 480 23 -
Phobius 459 480 22 -
Phobius 481 543 63 -
TMHMM 487 509 23 -
TMHMM 543 565 23 -
Phobius 544 566 23 -
Phobius 567 615 49 -
TMHMM 611 633 23 -
Phobius 616 634 19 -
Phobius 635 642 8 -
Phobius 643 659 17 -
TMHMM 659 681 23 -
Phobius 660 664 5 -
Phobius 665 682 18 -
Phobius 683 693 11 -
Phobius 694 713 20 -
TMHMM 694 716 23 -
Phobius 714 751 38 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0129100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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