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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0143000 |
| Transcript ID | LotjaGi4g1v0143000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectin acetylesterase; TAIR: AT4G19420.1 Pectinacetylesterase family protein; Swiss-Prot: sp|Q6DBP4|PAE8_ARATH Pectin acetylesterase 8; TrEMBL-Plants: tr|I3SC60|I3SC60_LOTJA Pectin acetylesterase; Found in the gene: LotjaGi4g1v0143000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:22430428..22435792) extracted from Lotus japonicus Gifu genome v1.2.
CATCTTTCTCATAAAGTTTCTTTCCCTCTTCTCCTAAATCAGGAAGTCACATTAATATAATGCTCTTGCACTGCTGGAGA GCATTACTTAAGCCACCACCCTCAAATGGTTTTCACTCACATCCTCCCAATATCACCATCACATCTTTCGTTTCAGGTTC AGTTTCTGTCCTTCATCGTTTCCTGCTTTCTACATTAATGTGTTGATTAGATTCTTACTTTGTTGTCCATAATTTTGTTA CCACAATATCGAAGGTGATTCCTTTTTGCTAGTTGTAGTTCATACACAATTCAATGTTATCCTCCTTAATTTTTTTTTCT GTATAAATTCAACAGTGCTGGTTATTTGATTTCTGATATCATAAGAAAAAAAGAAATTGATCTTTTGTTGTTAAGGTGAA CGACAAGATGAAGACACGGGTTGGCTAAAGAGTAAAGAATTGTTTTTGTTTTCTTGCTAGGACATATTATAGCATGTTTG TATTCACATTACATTATCCAAAATTAATTTCGCTCCCACGAAAGTTTCTCCCAGAATTAACTCTCATACCAACGTGAAAA TCTACAGTGTATCCAAACAGGCACTTAATGGGGTTTATGTTTTATTTTTTTCTCAAAATAATATACGACTTTGTGTGAAT TAGTCATATGCCATGATGATATCAAATAAGGCACCCTGTTTTCCCTTGTTTATATGCACAGGTTTTTTATTTGGTTGGAT TTTTCAGAATGGGAAGTGCAAGACTCACAATATGGACAAATCTTCTAGTGTGTGTACTGCTATTGCTGAAGACAGAAGGA GGTATTGTTCCACTCATTCGTCTTGAGAAGGCGGTATCAAAAGGAGCTGGTGAGAATTTTTTGCTGTTTCTGATCCTAGG AAACTTCAATGATCTTGCTCTTCATCTCTAGAATTGTTAATCATAGTTGAGAAATTAAAGTTTAACTTGTTGTGCAGTTT GTTTAGATGGCACTCCTCCAGCTTACCATTTTGATGAAGGGTCTGGAGAAGGAGTTAACAACTGGATTGTTTTCCTTGAA GTATGTCCCTTTCACTAATCTTGCATCAATTATAAGTCTTTCTGTAGCTTTCTTGTATGTTTCTTTTATTTATATGCATG TGTACCAGTACATCAATTGCTTTGTTAATTTTCTTGTATGAACTTCACTTTAGGGAGGAGGATGGTGTAATAATGTCACT GATTGCCTTTTGCGTAAGGACACTCGTCGAGGCTCATCTGACCAAATGACTGAGCCACGTTTCTTTAATGGATTTTTAAG TGAAAATCAAAAGTTTAATCCAGGTATTCTATAATGTCTGCTAATCAAATTATGTTTTTAACTCAACATTTTGCTTGGCT GTCTAATAAATTATATAAATTCTAGATTTCTACAATTGGAACAGAATCTTGGTTAGGTACTGTGATGGTGCATCTTTTAC TGGGGATGTAGAAGAAGTTGATCCGGCAAGTTTTGAAAAATTCAAAAGAAATTCAAAATACATAGTTCTAGAAATTTGTA TTTTTTTTCTCTAATTATCTTTTCTGATAGGAGTTTTACAATATGATGTATAAATCAGGCGACAAATTTGCACTTCAGAG GAGCAAGGGTGTTTGTAGCTGTAATAGAAGAATTACTTGCAAAAGGAATGCAGAATGCTGAAAATGTATGCGATATTAAT TGTTTGCCTCCTTTTATCTTCCTTCTGAATGTTTTTCCCCCACTCACTGAAACATGTTACAACAGGCTATTCTCTCTGGA TGTTCAGCTGGAGGATTGGCTACTATATTACAATGTGATCACTTTAAATCACTTTTACCTGCAGAAGCTAAAGTGAAATG CGTTCCAGATGCTGGTTATTTTATCAATGTGTACGCTCATTTTTTTTTTTTTTTTTGCTTTCAACTTATATAGCATGTTT GCAAATCCAATAACAATTGATTCTAAAGCCATAATCATTTCTTGAGAGAAGCTTCTGTGATTGCTGGGAGCCAGAATTGA TTCTGTGAGGGCAAATTATTTGATCCAAACATGCTATTAGACTTTTTCCATAGACATTATGATTTAACATGCTGTTGTTG TACAACAGAAAGGATATATCAGGAACACAATACATTGAAGAGTACTACAATGAAGTTGTTGCAACACATGTACTCATCCC TCCACATTATTTTTCCCTTTAGGAAAGCACTTGCATATGCTATGTTTTACACCAAAAGATTGGAACTAAAGTTTCCCCAC TTCATATTTGAAATTAAGATACTTTACGAATCTTTCATTCATCAGAGATTGATTTCTCCTTCTTTATGTTAGGGCTCAGC AAAGAATTTGCCTCCATCCTGCACTTCAAGACGCAGTCCAGGGCTGGTAAATTTGTAACTTTTGCAATTTAGCGTTTAGA TTCACAACTTCTTTAGTATTACTAATTCCTGAATTATCTTGTAGTGCTTTTTCCCACAATATGTGGCCTCAGAAATCAGC ACACCAATCTTCTATGTAAATGCAGCCTATGACACATGGCAGGTCAGATAATCTGTTGCTTAAGAAGGATCATTTGTTTT CAGCATGGTTTTCCATTGGAACATATTTGTGATACTAGTAACTTCTTAACAAAGTTTATATTCTATGATCAATTTGTGGG TTGATTTAAAGGGTGAATTAACATTAGCTAGAATATATTAGTGTGTATTTGGATTCCGTTAAACTCAAGTCCAAGTTGAA GCCAATGTGGCAAATGGGGTGTGTGTTTTCCTATTTGCGTCGAGGCAAACAGGAAAACAATTTGAATTAATGACCATCAT CGGCTTTTCTAGTATTGATTCTGACACTTTCCCTTTCATAGTTCAGAACTTGTATATAATTGACCTTAGATATGAACCTG GAATTCTAAGTGTAGAAATTTAGTCTCTTGACTAACTCATGTATGAAATTTATACAAGTAAAATCAACTGGCATTTATAA AAATGAGCCAAGACATAGAGTGGCTCGGGATGTGTTATTTTCCCGTTTTCATGCTTTCTAACGGGCATCCAAACTAGCTC ATAATCTAGTCATATAATTATTTCTTGATTCATTATGAACATTATGGAAACAAGAGAGAAATCTAAAATGCAAATGGCTG AAAACAGCAGAATCATTCCTGCTAATTATTTCTTGATTCATTATGCTGTTGTCATTTGATGTTTACAAAGTAAATTAATA ATGGCGAAATCAGTGTAGCCTTTCCTCTGATTCTCAAGATATTGCTTTGATTCAGATTCATAATATCTTCGCCCGAGGTT CTGCGGATCCCCATGGCATTTGGCATAACTGCAAGCTTGATATAAACAACTGCTCACCTGATCAGCTAACTGCAATACAA GGTTAACATTTTCTGATCTTAATGACTTGTGTACTCTCCAAATTTGTTGATGCATATATAAAGAAATTTTGCTCAGCTTC TAATCAGTCTAATAAAGATGTCTATAACTTGTTCTGCTTCTGTTAATACTTCATGTAAACCATTCATTTATAGCCCATAA AATGTTAAAAGCATTGGCATAAGGGGAAAAAAGTGTACCTTGTCATACCTGGTCACACTCACCTGCCATTCAAGTGAAAC TAAAAGCTCCTAGTGGCCTATGGATTCTGCACAATATAACTTCTGTTATGGTTCTTTGAGATAGGGGCTATGCTTTAATG TAAGTAAGAAGTCATAGACCCCTCCGGCGCCAATCCATGATGATGTAGATTCATGCTCATCCAAGCCTTGAATCAACTAC TAGTGTGGATCTAGCTTGCTTAGAACTCAAGTCACCAACAAAGGAAGAAAGAAAACACAAATGTGGAGAGAAAAGGATTG AGGATCATAAGCCACAAGCAAATGCTTGATAAAATCCTAGGGTTGAGAAGCCACAAGCAAATGCTTGATAGTTCTCTATC CTTAGAGAGAATTTTAAGAGAAACTAACTTGTAACTCGCAAAAAATGTGTATTTCTCAAAATGAATCAAGGGTGAAGAAA ATACAAAGCAATCACTCCTTATATAGGGAAGGAAGGTGGCACCCAAACTCAAGAAGCTGGACCTAAACACTTGGCCCAAT ATGACTCCATGACTATTACTAACCTAATTGGGCTAAAGCACAAAGCTCAATTGCTATCCTACATGGGCTGGAAATTCAAG CCCTAAATTATCATCAATGCCCAAGGGTCAATCCTAATTTCTAAGTAGATCAATATACAAGCCCAAAAGTAAATACAAAG GAAAATACAATACTAGTCAGACAAGCTTGTTTTGGAAATCATGTTTTAAATGATGATTCCAAATTTCCAATAAACTTGCA AGTTCCCATCTCTTCCTTGCCATGCATGTGACACATGAGTATACCATGATGTTACAAAAGTGAACCAACCACCCAAGGAG AAGTAGGCATAAGGAAAGAGCAATAGACCGCGAAAAACTGTTAGTTTTCCTAAACCAACCGATCCATTTTTCTCACAGCA TTTTCAGAGCAGGCTCAGTGCTTTCTGTAGCCATCATGTTATTGCTCTTGGTTTACATACAACTACATTCAAGACTTTTT GAAGTTCTATGACTTTACTTTAATTTTCAGGCTTCAGAACAGAATTTATAAAGGCGTTGAGTGTGACAGAAAACTCCAGA TCAGAAGGAATGTTCATAGACTCTTGCTATGTCCACTGCCAAACAGAAACACAGGAATCATGGTTGTCAAGTGATTCTCC ACAGCTTGCTAACACAGTAAGAGACTGCATTTTTTCTTTTGTGTGTGGCTTTTGGTTAATATCATCTTCTTTCGTTTTAC ATCTAGTTTCAAAACTAACTTTTCTGCATAACATTCTGCAGAAACTTGGCAAAGCAGTTGGGGACTGGTTTTATGAGCGA AGTCCTTTTCAAAAGATAGATTGCAGTTTCCCTTGCAACCCTACTTGTCGTAATCTTGCATTTGATCAACAAGCTCACCC TGGAATTTAAGATTCATCCAATCAGTCGATATCATTCCAATAAACCAAGCTTATTGGTTCACTGGTATGAGAAACTAAGG AAGGAAAATAAGAGAAAGATGCTACTGCTTGGAGCTTGTGTGCAGGGCACCCTCAATCATTGTTTGGTGTTAGTGTTACT ACTGTCAAATTATGTTACTAATTGGTCTGTCTGTTTGACAATGTTTTCATTTGTTTACAAACTATGTAAAAAAATTCAAA CTGTTACTAGAAATTGCATGAGTGATTTTATTATCCAACAGTTCAAAAACACAGGACAGTTGCTATGTGATCATTGATCA AAGAACCATGCTTCCATAATTGAGTAGGTATCGCAATATTGGTAAAAGAGTGGGATAAACTCATGAAATGAGATTGTTAT AAGAT
CDS sequence (LotjaGi4g1v0143000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGTGCAAGACTCACAATATGGACAAATCTTCTAGTGTGTGTACTGCTATTGCTGAAGACAGAAGGAGGTATTGT TCCACTCATTCGTCTTGAGAAGGCGGTATCAAAAGGAGCTGTTTGTTTAGATGGCACTCCTCCAGCTTACCATTTTGATG AAGGGTCTGGAGAAGGAGTTAACAACTGGATTGTTTTCCTTGAAGGAGGAGGATGGTGTAATAATGTCACTGATTGCCTT TTGCGTAAGGACACTCGTCGAGGCTCATCTGACCAAATGACTGAGCCACGTTTCTTTAATGGATTTTTAAGTGAAAATCA AAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCTTGGTTAGGTACTGTGATGGTGCATCTTTTACTGGGGATGTAG AAGAAGTTGATCCGGCGACAAATTTGCACTTCAGAGGAGCAAGGGTGTTTGTAGCTGTAATAGAAGAATTACTTGCAAAA GGAATGCAGAATGCTGAAAATGCTATTCTCTCTGGATGTTCAGCTGGAGGATTGGCTACTATATTACAATGTGATCACTT TAAATCACTTTTACCTGCAGAAGCTAAAGTGAAATGCGTTCCAGATGCTGGTTATTTTATCAATGTAAAGGATATATCAG GAACACAATACATTGAAGAGTACTACAATGAAGTTGTTGCAACACATGGCTCAGCAAAGAATTTGCCTCCATCCTGCACT TCAAGACGCAGTCCAGGGCTGTGCTTTTTCCCACAATATGTGGCCTCAGAAATCAGCACACCAATCTTCTATGTAAATGC AGCCTATGACACATGGCAGATTCATAATATCTTCGCCCGAGGTTCTGCGGATCCCCATGGCATTTGGCATAACTGCAAGC TTGATATAAACAACTGCTCACCTGATCAGCTAACTGCAATACAAGGCTTCAGAACAGAATTTATAAAGGCGTTGAGTGTG ACAGAAAACTCCAGATCAGAAGGAATGTTCATAGACTCTTGCTATGTCCACTGCCAAACAGAAACACAGGAATCATGGTT GTCAAGTGATTCTCCACAGCTTGCTAACACAAAACTTGGCAAAGCAGTTGGGGACTGGTTTTATGAGCGAAGTCCTTTTC AAAAGATAGATTGCAGTTTCCCTTGCAACCCTACTTGTCGTAATCTTGCATTTGATCAACAAGCTCACCCTGGAATTTAA
Protein sequence (LotjaGi4g1v0143000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSARLTIWTNLLVCVLLLLKTEGGIVPLIRLEKAVSKGAVCLDGTPPAYHFDEGSGEGVNNWIVFLEGGGWCNNVTDCL LRKDTRRGSSDQMTEPRFFNGFLSENQKFNPDFYNWNRILVRYCDGASFTGDVEEVDPATNLHFRGARVFVAVIEELLAK GMQNAENAILSGCSAGGLATILQCDHFKSLLPAEAKVKCVPDAGYFINVKDISGTQYIEEYYNEVVATHGSAKNLPPSCT SRRSPGLCFFPQYVASEISTPIFYVNAAYDTWQIHNIFARGSADPHGIWHNCKLDINNCSPDQLTAIQGFRTEFIKALSV TENSRSEGMFIDSCYVHCQTETQESWLSSDSPQLANTKLGKAVGDWFYERSPFQKIDCSFPCNPTCRNLAFDQQAHPGI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 394 | 394 | 9.0E-218 | – | |
| PANTHER | 1 | 394 | 394 | 9.0E-218 | ||
| Phobius | 12 | 20 | 9 | - | – | |
| Phobius | 21 | 24 | 4 | - | – | |
| Pfam | 21 | 372 | 352 | 4.6E-160 | ||
| Phobius | 25 | 399 | 375 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0143000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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