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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0143300 |
| Transcript ID | LotjaGi4g1v0143300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectin acetylesterase; TAIR: AT4G19420.3 Pectinacetylesterase family protein; Swiss-Prot: sp|Q6DBP4|PAE8_ARATH Pectin acetylesterase 8; TrEMBL-Plants: tr|I3SC60|I3SC60_LOTJA Pectin acetylesterase; Found in the gene: LotjaGi4g1v0143300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:22459613..22464514) extracted from Lotus japonicus Gifu genome v1.2.
CAATTGTATCAAATCAGAACACCTTCTTCCTTCACCCGCTTCATCTCCGTCGTCCGCGCCGTTAATAACTTCCCACTCCT CCGCTCTCGGTGGCTTCACCGGCGTGAGGCTGTGCCCTGCCATCCAAGTGTTCGACAAATGGCCCAATCAAGCTGCTGCC TCTTCAGCTTCTACAGTGCAAGCCGGCTGGTGTCCAACGGCGGACCGGTGACCGGCCACTCAGCAGTGCGGCCAATGTGG GTGGTGCTCCGGTGGTTTATGCTTCCATGTGAATCGTTGGATTCATCCAAGGGACAGAAACACTGCTGGAAAAGGATTGA TAGAATTTGGTTCTGGTGAAGATCCACATCCATACTCTCTATGGTGTGTTCCTAACCATTTTCCTTTTTCTTTTTAGGAA ACCTGATTTGACTTTCCAATACCAGTAAAATTCTGCTCTCCATCATTTTCCTTGTAAACCGATGGATTAATGCCGTTGAA ACTTGAAAGACCAATGATGTTTCTCTTTGAACGTAAAAAAAATGATGTTTCTCGTTAGTAAGACATTGAAATAGTTTACT GCATTTTAAGTAGAATGAGTGATGTGATAGGAAAAATGTGAGATAGAAAAGAAATCACTTACAATTGAGCTCGGGTTTTG ATGCACTCAGAGCTCGCTTTCTCTTCCATTCCATTTTCACATAATTTCTTGTTCTATGTCTCTTCTTTTACTATCGTATC ACTTCTCGTATCTCTCATTTCTTTCTATATCTCATTAGGTGTGGGTGCTATGTGGGTGTGGATTAAGTTTTATTAGTTGA ACTCTCCCTCCACGCGCTTTTTTACATTTTTCCCTCCCAACTTTCTCAAAGAGTTTCTTTCCCTTAACCATTTCCTAAAT CAGCATGTCACATTAATGCTCTTCCACTACTGGAGCATTATATATGCCACCACCTAAACTGGTTTCCACTCACATGCTCC CAACCTCACCACCCCATTTTCTTTTTCAGGTGCAGCTTGTGATCTTCATTGCTTTCTGCTTTCTACCTAATGTTTTTCCT TTTTAGTTGTATTGATTTCTTTTATTTTTGTTTGTTGGGTTGGAAGAATTTTCTGGTGTTATAAGCTGCATAACACAGGA GAAGTTGATATTTTTTTGTCAGATGTATTTGCTTTTATGATGTTATGACTATGCATGCAACAATTTTGAATTTCCATGGT AGGTACCAGTGAAAGCATTAGGGTGCCACAATTAATATGCATGAACTTTGGAGGTTTTTGTTTTGTGGTCTGAGAATGTA CTTTCTAGACTAATTTATTGAATTAGTTAAGTTTTCTGAAACCAAATAGATGAAGGAGTTCGCTAATTCTAAGATTACAA TATGGATTTGGAATATTTCATTTTACTTCACCAACCAACAAAGAAAAAGAGCAAAGGAAACTCTGCTGATAACATCTTGA TTAGATTCTTACGTTATTGTCCATAATTTTGTTTCCACAATATGAAAGGTGCTTTCGTTTTGCTAGCTCATACATAATTT AAGGATCTCCACTGTATTTTTTCCTGTGTAAAATCAACACTGTTGCCTATTTGATTTCTGATATCATGAGAAAAAAAATA TATATCTTTTTGGTAAGACGAACAGAAGTTGAGTTGAGGAGATGGAATGCAAAAGAATTGTTTTTTTTTCTCATGATGAT ATCACATAAGGAACCCTGTTTATCCTTGTTTCAATTGGCAGGTTTATCGTTTGGTTGGATTATTCTGAATGGAGAGTGCA AGAATCACCCAATGGACAAATCTTCTAGTATGCGTACTACTATTTCTGAAGACAGAAGGAGGTTTTGTTCCACTCACTCG TCTTGATAAAGCTGTACCAAAAGGAGCTGGTGAGAAAAAATTTCTGTTTCTGATCATAGGGAACTTCTAAAGTCATGCTC TTCATCTCTTGGATGATTATTTTCTATATTGTTTATATAATAGTTGAGAAATTGAAGTTTAACTTGCTGTGCAGTTTGTT TAGATGGAAGTCCCCCAGCATACCATTTTGATGAAGGGTCTGGAGAAGGAGCTAACAGCTGGCTTGTTCATCTTGAAGTA TATCCCTTTCAATAAACTGGCATCAATTATAAGTTTTGGCTAGCTCATGAAAAAATTCCGCTAGTCTTTCTCTAATTTTC TTGTATGTTTCTTTTATTTATGCGCATGTGTATAAGAGTTGCTTTGTTAATTTTCTTGTATGATCCTCACTACAATTCAT TTTAGGGAGGGGGATGGTGTAACAATGTCACCTCTTGCCTCTGGCGTAAGGACTCTCGTTTAGGCTCATCTGACCTAATG ACCGAGCCACTTTACTTTGCTGGATTTTTAAGTGAGAAGCAAGAGTTCAATCCAGGTATTTTATAATGACGCAATTTGAA TATGGGCTAAAAGCACTTATGGGAGCTTCTCTACTAAAAATTATAAAATGCCCTGAATAAGCTCTAGTAAGGGCTCTTTC GTCTGCATCCAAACATACTCATTGTCTACTAAGCAATGATGCTTTATTAACTCAACATTTGGCTTTGCCGTCTAACAAAT TTTACAAATTCCAGATTTCTACAATTGGAACAGAATCATGGTTAGGTACTGTGATGGGGCATCATTTACTGGTGATGTAG AGGAAGTTGATCCAGTAAGTTTAAAAAAAATCAAAGGAATTGGGAATTAAAATTTCAAGGAAAATATAAATCATTGCTAA TTTTCTTTCTGAGTGGATTTTTATGTTATGATATGTAAATCAGACAACCAATTTGCACTTCAGAGGAGCAAGGATTTTCC TTGCTGTAATAGAAGATTTACTCTCAAAAGGAATGAATAATGCTGAAAATGTAAGAGATAGTAATGATTTGCCTCCTTTA TTATGCGTCCTGAATGTTTATCCCCGACTAACTGAATTTTGTAACAACAGGCTATTCTCTCTGGATGTTCAGCAGGAGGA TTGGCTACTATTTTACACTGTGATCACTTTAAATCACTTTTACCAGCAGGAACCAAAGTGAAATGTGTTCCAGATGCTGG TTATTTTATCAATGTGTAAGCTACTTTTCTTTCCTTTCTACTTAGAGGGTTTGGATACTCCTTAGGAAGTATGGAAATAG GAAAATAACACATTCGGTGCACTTTTTGTTGCCTGATCTACTTCCATAAAAGGTGCATTGGGATGTGTTACTTTCCAGTT TTCTTACTTTCCAACGGGTGAGTTCCTTTGATGATTATGATTTTATTTATTGTTTTTGTGCAACAGAAAGGATATATCAG GATCACAATACATTGCAGAGTTCTACAATGAAGTTGTTGCAACACATGTACTCCTCCCTTCTCATTATTTTTCCTTTTTG GAAAGCACTCGCATATGCTATGTTTCACACCAAAATAGTGGCACTAAACCTTTTCCATTTTACATTTGAAAGATACTTTA TGAAGCTTTCGTTCATCAGAGACTGATTTGTTTTTTCTTTCCATTTAGGGCTCAGTAAAGAATTTGCCTTCATCCTGCAT TTCAGAACGCGATCCAGGGCAGGTAAATTCGTGACTTGTAATTTTAGCTTTAAGGTTTGAAACTTCTTTGGTATTACTAA TGCTTCTGAATTATCGTGAAGTGCTTTTTCCCACAATATGTGGCCCCAAATATCAATGCACCAAGCTTCTACGTAAATGC GGCCTATGACTCGTGGCAGGTCAGATTATCTGTTACTCAAAAAGAATCATTTATTTCAAGAATGACCATTGTAGGCTCTT GTGGTGTTTATTCTGACACTTTCCCTTTCATAGTTCAGAGCTTGAAAATATTTGATCTTCAATATGAAGTACGAATTCTA AAAATTGTGTAGTTGCTTGATCAACTCATGTATGAAATTTGGACATGCAAAACCAACTAATATATGATCAAAATTGAGCC AAGACTATGATGCATAATCTATTCATTTAATTATTTTCTCTGATCCTCAAGTTATTGATCTGTTTCAGATTAAGAACATC TTGGCACCGGGTGCTGCTGATCCCCAGGGCAGGTGGCAAAGCTGCAAGGTTAATATAAACAACTGCTCACCTGATCAGCT AACTACAATGCAAGGTTAACACTTTTTATCTTAATGACTCGTCTCAGGTACTCTCGAGAATTTTAGGCTTAAAGCATGGA CAATGTGTAGGCTCACCTACAAAGCTCGCTGAAGTTTTATATTAAATTTCTAACGTATACATGAATTGATTTTCAGGCTT CAGGTCGGCATTCATAAATGCATTGAGTGTGATAGGCAACTCTCCATCAAATGGAATGTTCATAGACTCTTGCTATGTTC ACTGCCAAACAGAGGCACAGGAGACGTGGTTGACAAGTGATTCTCCACAGATTTCTAACACAGTAAGAGACTAAATTTTT TCATTTTTATTTTGGTTATTATTGTCTTTCCTTTTACATAGTTGCAAAGCTAACTTTTGTGCATAACATTCTGCAGACAC TTGCCAAAGCAGTTGGAGACTGGTTTTATGAGCGAAGTACATTCCAAAAGATAGATTGCAGTTACCCTTGCAACCCTACC TGTCGTAACCGCGTATTTGATCCACAAGCTCACCCTGGAATTTAAGATTCATTCAATCAGTATAATGTCATTCCTATAAA CCACACATACTATTTAACTGGATATTATAGATGGAGAAACTAAGCAAGGAAAATAAGTGAAGGATGCCATTGCTTGGAGC TTGTTTGTGTGCTTGTTTGGTGTTACTACTGTCATACACCTTATAATATAGTGTATTATGCTATTGCTAATTGGTGTGTC TCCTTTACTATGTTGTTACTTGTTATCAACTATGTAAATCGTTCAAACCGTTAAATGTAATTGCATGAGTGATTTTATTA TCCAAATGTAAATGCTTTACCC
CDS sequence (LotjaGi4g1v0143300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGTGCAAGAATCACCCAATGGACAAATCTTCTAGTATGCGTACTACTATTTCTGAAGACAGAAGGAGGTTTTGT TCCACTCACTCGTCTTGATAAAGCTGTACCAAAAGGAGCTGTTTGTTTAGATGGAAGTCCCCCAGCATACCATTTTGATG AAGGGTCTGGAGAAGGAGCTAACAGCTGGCTTGTTCATCTTGAAGGAGGGGGATGGTGTAACAATGTCACCTCTTGCCTC TGGCGTAAGGACTCTCGTTTAGGCTCATCTGACCTAATGACCGAGCCACTTTACTTTGCTGGATTTTTAAGTGAGAAGCA AGAGTTCAATCCAGATTTCTACAATTGGAACAGAATCATGGTTAGGTACTGTGATGGGGCATCATTTACTGGTGATGTAG AGGAAGTTGATCCAACAACCAATTTGCACTTCAGAGGAGCAAGGATTTTCCTTGCTGTAATAGAAGATTTACTCTCAAAA GGAATGAATAATGCTGAAAATGCTATTCTCTCTGGATGTTCAGCAGGAGGATTGGCTACTATTTTACACTGTGATCACTT TAAATCACTTTTACCAGCAGGAACCAAAGTGAAATGTGTTCCAGATGCTGGTTATTTTATCAATGTAAAGGATATATCAG GATCACAATACATTGCAGAGTTCTACAATGAAGTTGTTGCAACACATGGCTCAGTAAAGAATTTGCCTTCATCCTGCATT TCAGAACGCGATCCAGGGCAGGTAAATTCGTGA
Protein sequence (LotjaGi4g1v0143300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESARITQWTNLLVCVLLFLKTEGGFVPLTRLDKAVPKGAVCLDGSPPAYHFDEGSGEGANSWLVHLEGGGWCNNVTSCL WRKDSRLGSSDLMTEPLYFAGFLSEKQEFNPDFYNWNRIMVRYCDGASFTGDVEEVDPTTNLHFRGARIFLAVIEDLLSK GMNNAENAILSGCSAGGLATILHCDHFKSLLPAGTKVKCVPDAGYFINVKDISGSQYIAEFYNEVVATHGSVKNLPSSCI SERDPGQVNS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 246 | 246 | 4.7E-134 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 246 | 246 | 4.7E-134 | ||
| Phobius | 12 | 20 | 9 | - | – | |
| Phobius | 21 | 24 | 4 | - | – | |
| Pfam | 21 | 245 | 225 | 9.1E-107 | ||
| Phobius | 25 | 250 | 226 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0143300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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