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LotjaGi4g1v0145200.2

Overview

Field Value
Gene ID LotjaGi4g1v0145200
Transcript ID LotjaGi4g1v0145200.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT4G19120.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q94II3|PMTL_ARATH Probable methyltransferase PMT21; TrEMBL-Plants: tr|A0A151RER9|A0A151RER9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0145200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:23292415..23297823) extracted from Lotus japonicus Gifu genome v1.2.

ACAGCTGGGCACTTAGTTATAGACTATGGTTGAGCTAGTTGAGTTTTTAAGCCTGAGGTATCTGACTTATGTGCATGAAC TCTTTTACTTCCTACTTCTTAGTTCCTCTTCTTCTTCTCTCTCATTCTGCAAACACTGCTTCTGTTTCAGTCACCACATT TACACTTTCCACTGTTTCAACCACAAGTGGTAGCAGATACAGAGGAGAATAATAAAAAAACAAAAACAGACAAGTGATAA TAGTCAGTTCCTTCTTATCCTTTCACTCCTTTCTTCTCTTTCTTTTGTCATCTTTATTGGATTCTTTTCTCATCTTTGCT GCTTCCAATTTTGTATCTTTTTGTGTCACAGATCTGATTTTTGCTTCTGGGGTTCTCTAAAATTCTCTTGTTTTTTGGTT TGTTCCAATTTGATATTTTGTGACACTCGAGTGCTTCATGTTTGGTGCGTTTATCATCAAAATTTCTCCTTTTTCCATTT TACATTCAATTATCTAGATGGGGTTTTGAGATTATTAAAAAGTTCATTTTTTTTATGCTTTCATGCTCTGAGCTTAAATC AGTGAGACATGGGTGGGAAGTGGGAGGATTCTTTGAAAATTATATTACTGTTATGTGATGCCTTTTCTTCTGTGTTTTTG TCAGTGTGTTTGGTTTCCATTGTTTGGGCAAGGGAAAATAGTGTAAGATCTAGAGCTTCCTTTTTGCTTTATTTGAAGTG ATGATGAGTTTCTGGGCCCAATGTCATGTGAAAATCATAAAGTAGTAGATTTCAATATTATAGCTTACCCCATGTAGTTT TATTGGTCGGTTAGTTAGTATTGTCCAGCTGGAGTTTAATCATCATTTCCTATTTTTACTCTGCCATTTTGTGATTCTAA AATTTGGACCTTTAGTGTTGTGGTTATGGTGTTTAAATCTGGTTTTGTGTGTTCTAATTGCAATTGGCATTGTTTGTTGT CTTTTATAGATTATTTTGAGTGATTTAATCTAATGCTGTTGCTAACTCAATTTTGAATGCGATGTGTAATCTGTTTTTGT TTTCAGTTGTTGGGTTTTAAATTTTTAAAGTACGTGTGGTTGCATTTTAGTGATGCTGAGTATTATTTCTATATGCAGAT AATTGATTATTTCACAGACCATGAGTCTTAATGATGGAAAACTGGACAAGAGCAGGATGGTCTCTGTGGCGGTCGTATTT GTGGTGTTATGTGGAGTTTCTTTCTATATGGGTGTAATATTTTGTTCTGAGAAAGATAGATTTGTCTCAATTAGTAGCCA GAACTCCCTTGAGTCTCCCAAGGAATCATCAATTAGTCCTCTGCAAATTAAAGACATCAGTTTTCCTGAATGCAGCATTG ACTATCAAGATTACACTCCATGCACAGATCCAAGGGTAATGTACTATAGTATTCCATTTTCTGATGCAGTATGATTTGTG GAAGAAAGTTTCCCTGTTGATTAAGAATGCTTAGTTTTATAGGGATGGAAAAAGTATGGTACGCATCGGCTTACCTTCAT TGAACGCCATTGCCCTCCAATTTCTGAGAGGAAAGAATGCTTAGTTCCTCCACCAGATGGGTATAAGTCTCCAATTAGAT GGCCAAAGAGTAGAGATGAATGTTGGTACAGGTATAATATAATATGCACCTTATTAGTTTGCAATAAAAAACTTCCTTAA TTTAAGTTTCCTGAAAGTTTGCTGTTATATCTAATTTCAGGAATGTTCCATATGACTGGATTAACAAGCAGAAGTCGAAT CAACATTGGTTGAAAAAGGAAGGGGAGAAATTCCTCTTTCCTGGTGGGGGTACCATGTTCCCCAATGGTGTTGGTAAATA TGTTGACTTGATGGAAGACCTGATCCCAGAAATGAAAGGCGGGACAATTCGAACTGCCATTGATACTGGATGCGGGGTGA GCCTCACTCTCTTACTCTTTGTATTTATCTTGGGAATAGAAAAATTTCAATTCTTAAAATTCCTTAGAGACCAAATTCTT AGTTTAATTATGTGCTCTGGTTCTTTTAGTTGTAATTTCTTAACTGTATGTGTATATATATATTTTAAAATCAATTAATT TTGTACCTTTAGAAAAAAAATTAATTTCAGCTGCTTTTCTCAATCATGTGATACACAAAGTATTAGCATCAATTAATCCA TATAACGCTTATTCATTTTAGGTTGCTAGCTGGGGTGGTGACTTGCTGGATCGTGGGATTCTAACTGTTTCTCTTGCCCC AAGAGATAACCATCAAGCTCAGGTTCAGTTTGCTCTGGAGCGTGGTATCCCTGCAATTCTTGGCGTCCTTTCTACTCAGA GACTTCCATTCCCATCAAACGCATTTGATATGGCTCATTGCTCCAGATGCCTCATCCCATGGACAGAATTCGGTACTCTT CTATGGATTTTAACTCTTAGCTATCAAATATATTTTGTTCCTGTTTCTGCCGTGTTTACCAGTGATCATGAACTTTACTA GTTTGTAGCTTACTTAAACTTTAAATTTCACATGGATTTTCTAAAGACATGTGGATTTTCTCAAATCAGGCTTATATCTA GTTTCAATGACCATATTGTTTTTCAGATCTTGTGCGACAATTTATTATTAGTTACTTTTAATTAAGCTTTATAGCACCAG GTTTGCCTTTTTTATAATGCTTTGGTGCTATGATATTTGTTTTCTGCTAATCAATTTCTGCTTAGAGCTGAGAAGTTCAG AGTAAATTCTCATGGGCTATCTGGTTTTAGGCGGAGTTTATCTCCTTGAGATACACCGGATTCTTCGTCCTGGAGGATTT TGGGTCCTGTCTGGTCCACCAATCAACTATGAGCGCAGATGGCGTGGCTGGAACACAACTATCCAAGAGCAAAAATCAAA TTATGATAAGTTGCAGGAAATGTTGACTTCAATGTGCTTTAAAATGTACAATAAAAAGGGTGACATTGCTGTATGGCAAA AGTCTCCAGAAAATGATTGCTATAATAAGCTGCCTAAAGATACCTATCCACCCAAATGTGATGACAGCTTTGAACCAGAT TCAGCATGGTATACTCCACTTCGTGCTTGTGTTGTGGTTCCCAATTCAAAGTTTAAGAAATTAGGTCTGCCTTCAATTTC TAAGTGGCCTGACCGGTTGCACGATACGCCTGAACGGATTTCAATGGTTTATCATGGGAGTGCTAGTGTTTTCAAACAAG ATGACAGTAAGTGGAAAAAGAGTGTTAAGCATTACAAGAAGTTGATCCATGACCTTGGGACTGACAAAATAAGAAATGTG ATGGACATGAATACGGTATATGGAGGTTTTGCTGCAGCCTTGATTGATGATCCCATATGGGTCATGAATGTGGTCTCATC TTATGCTGCCAATACACTCCATGTGGTTTATGATCGAGGCCTCATTGGAACGTACCATGACTGGTAATTTTGAAATTTTG AAAATGAACCATAAGGTTTTTAATCTCGATGAATATATTTTTGTCTAATTTGATCGGGTGTTGATTTCACTTTTGTTATG GTAGGTGTGAAGCTTTTTCAACATATCCTCGAACATATGACCTTCTTCATGTTGCTGGACTCTTCACTGCAGAAAGCCAC AGGTAACTTGAGTGAGCTGTCAGTTGGTATTAAGACGCGTGTTTGGATCAATGTTGTCACAATTGATTTTGTATAATATT AATTTTAGCAAAATTGATTATTTTAAAAGTGAGTTGAAAGTGAAGTGATGTTTGTATTATCTATGAAAAAATTGGTTTTT GAACGGTAATTAGTGTTGTGAAGTTCAGTTTTAAAATCTCAGAATTGATTATGCTCAACAAAGATGCTACTTATGCTAGC TTCTAGTAAAATTGATTTTAGGGTTAAAATCAATTCTCTAAAAGGACTCCCAACGAGGAACCAAGCACACACACATGCAC ATGGACTTTGTTGGGCTTCTGAGTCTTGACTTGTTTTGATGTGAATCACTTGAGTGCTTGTTAGATATTCATTATTGCAC ACATATAAATGCTTTTTCATTCAACTTCTTTCTCTTGAACTTATATAATATTTTTTAAGTGAGTTAATTCAACAGGAACT AATAAGAATTTATAAAAAGGTGATAAGATGAACTGCACTTTTCTCGTTGCTGTGATTTAATTTACTTCAGGTTTGATTTG CAACTTCAGTGATTTTTCGTTTTTTTGGTGAAATCATTTATATTAAAACTGATTTAGTTTGAGTCTGAAAATTGGGAGCG TGGAAGCACCAACATTTTGCATCAATTGTACCTGTTCTCATGTTGAACTTTTATCATGTCGAGCACTTTATGGAGTCTTA AGATATTCTTAGCTGAACTTCTCATATTTTTTCACTTTTCTTTTTTACATTTCTATTATACCAATATAGATGCATATAAG AAAAAGTGCTTTGGTTCACAAAAAAGTGAAAAACCTTACATTCATACATGACTTTATTAAGATTCCAGTTTCCCTGACTA ACTTAACTGGATGGATAGCTGATTTACTCTAAACTTTATTTATTTTTTAAAATATGCCCTGACTTCTCTGACAATGATTG ATACCAACTTACCATGCAGATGTGAAATGAAGTATGTGTTGTTGGAAATGGATCGAATTTTACGACCCGGTGGGTACGCA ATCATTCGTGAGTCCAGTTACTTTGTGGATCCCATTACAGCCTTTGCCAAGGGCATGCGATGGGAATGCCGTAAAGAAGA AACTGAGAAAGGCGGCGACACAGAAAAGATATTGATATGTAAGAAAAAGCTCTGGTATTCATCCATCAAAGGTTCAAGAT GACAAACTCTGAGTCCTCAGCAGTAGTGAGATGGTGGTGTGGTTGGAGTACTATTGCCAAGAGTAAAATTGATTCGAAGT TCTGTAACATAATCTCCCAAGAATCAGTCTAGCAGATAGTCGACAAAAGAACAATTGGTAACCCAATAATCTCATTTGAT TAATTTATATAGAAAGTTTTCTTATATATTCATATAGATTTATTCAGTTGAAGGAGTTTGGCTAGTTTTCTCTTTGCTTT GGTTTCTTGTGTTGTTATTTTCGTAATCTACCAAAAAAATATAGATCTGAGAGTCTTTATATGTCATGGAATGTACCTGT ACCAAGAATCCCTTTTATCTTCCCTTTTATTTTCCTTTTTTTAGAACACATTTCATGTCAATGGAACTCAGATGAAGGAA TGGAAGTTTTAAACCCCATATGATTTCTCATGAGTGCTACCATTTCAAGAACAATGATATTGTTGTACATAAATTATTTT GCTGAGAATAGCACCTGTTGCAGTAATACTGATATATTTTGGCTAGTTATTGTGTTTCATAGCTTCTTGTTGTTGTAAGT AGGTAAGTGAAGTATTAGCAAGTTTTTTTTTTTGCCTAATAGATGCCGT
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0145200.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGTCTTAATGATGGAAAACTGGACAAGAGCAGGATGGTCTCTGTGGCGGTCGTATTTGTGGTGTTATGTGGAGTTTC TTTCTATATGGGTGTAATATTTTGTTCTGAGAAAGATAGATTTGTCTCAATTAGTAGCCAGAACTCCCTTGAGTCTCCCA AGGAATCATCAATTAGTCCTCTGCAAATTAAAGACATCAGTTTTCCTGAATGCAGCATTGACTATCAAGATTACACTCCA TGCACAGATCCAAGGGGATGGAAAAAGTATGGTACGCATCGGCTTACCTTCATTGAACGCCATTGCCCTCCAATTTCTGA GAGGAAAGAATGCTTAGTTCCTCCACCAGATGGGTATAAGTCTCCAATTAGATGGCCAAAGAGTAGAGATGAATGTTGGT ACAGGAATGTTCCATATGACTGGATTAACAAGCAGAAGTCGAATCAACATTGGTTGAAAAAGGAAGGGGAGAAATTCCTC TTTCCTGGTGGGGGTACCATGTTCCCCAATGGTGTTGGTAAATATGTTGACTTGATGGAAGACCTGATCCCAGAAATGAA AGGCGGGACAATTCGAACTGCCATTGATACTGGATGCGGGGTTGCTAGCTGGGGTGGTGACTTGCTGGATCGTGGGATTC TAACTGTTTCTCTTGCCCCAAGAGATAACCATCAAGCTCAGGTTCAGTTTGCTCTGGAGCGTGGTATCCCTGCAATTCTT GGCGTCCTTTCTACTCAGAGACTTCCATTCCCATCAAACGCATTTGATATGGCTCATTGCTCCAGATGCCTCATCCCATG GACAGAATTCGGCGGAGTTTATCTCCTTGAGATACACCGGATTCTTCGTCCTGGAGGATTTTGGGTCCTGTCTGGTCCAC CAATCAACTATGAGCGCAGATGGCGTGGCTGGAACACAACTATCCAAGAGCAAAAATCAAATTATGATAAGTTGCAGGAA ATGTTGACTTCAATGTGCTTTAAAATGTACAATAAAAAGGGTGACATTGCTGTATGGCAAAAGTCTCCAGAAAATGATTG CTATAATAAGCTGCCTAAAGATACCTATCCACCCAAATGTGATGACAGCTTTGAACCAGATTCAGCATGGTATACTCCAC TTCGTGCTTGTGTTGTGGTTCCCAATTCAAAGTTTAAGAAATTAGGTCTGCCTTCAATTTCTAAGTGGCCTGACCGGTTG CACGATACGCCTGAACGGATTTCAATGGTTTATCATGGGAGTGCTAGTGTTTTCAAACAAGATGACAGTAAGTGGAAAAA GAGTGTTAAGCATTACAAGAAGTTGATCCATGACCTTGGGACTGACAAAATAAGAAATGTGATGGACATGAATACGGTAT ATGGAGGTTTTGCTGCAGCCTTGATTGATGATCCCATATGGGTCATGAATGTGGTCTCATCTTATGCTGCCAATACACTC CATGTGGTTTATGATCGAGGCCTCATTGGAACGTACCATGACTGGTGTGAAGCTTTTTCAACATATCCTCGAACATATGA CCTTCTTCATGTTGCTGGACTCTTCACTGCAGAAAGCCACAGATGTGAAATGAAGTATGTGTTGTTGGAAATGGATCGAA TTTTACGACCCGGTGGGTACGCAATCATTCGTGAGTCCAGTTACTTTGTGGATCCCATTACAGCCTTTGCCAAGGGCATG CGATGGGAATGCCGTAAAGAAGAAACTGAGAAAGGCGGCGACACAGAAAAGATATTGATATGTAAGAAAAAGCTCTGGTA TTCATCCATCAAAGGTTCAAGATGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0145200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSLNDGKLDKSRMVSVAVVFVVLCGVSFYMGVIFCSEKDRFVSISSQNSLESPKESSISPLQIKDISFPECSIDYQDYTP CTDPRGWKKYGTHRLTFIERHCPPISERKECLVPPPDGYKSPIRWPKSRDECWYRNVPYDWINKQKSNQHWLKKEGEKFL FPGGGTMFPNGVGKYVDLMEDLIPEMKGGTIRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHQAQVQFALERGIPAIL GVLSTQRLPFPSNAFDMAHCSRCLIPWTEFGGVYLLEIHRILRPGGFWVLSGPPINYERRWRGWNTTIQEQKSNYDKLQE MLTSMCFKMYNKKGDIAVWQKSPENDCYNKLPKDTYPPKCDDSFEPDSAWYTPLRACVVVPNSKFKKLGLPSISKWPDRL HDTPERISMVYHGSASVFKQDDSKWKKSVKHYKKLIHDLGTDKIRNVMDMNTVYGGFAAALIDDPIWVMNVVSSYAANTL HVVYDRGLIGTYHDWCEAFSTYPRTYDLLHVAGLFTAESHRCEMKYVLLEMDRILRPGGYAIIRESSYFVDPITAFAKGM RWECRKEETEKGGDTEKILICKKKLWYSSIKGSR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
CYTOPLASMIC_DOMAIN
1 11 11 - –
PANTHER
PTHR10108:SF1084
6 592 587 0.0 –
PANTHER
PTHR10108
6 592 587 0.0
IPR004159
Phobius
TRANSMEMBRANE
12 34 23 - –
TMHMM
TMhelix
13 35 23 - –
Phobius
NON_CYTOPLASMIC_DOMAIN
35 594 560 - –
Pfam
PF03141
77 583 507 1.2E-217
IPR004159
SUPERFAMILY
SSF53335
111 308 198 7.64E-28
IPR029063
Gene3D
G3DSA:3.40.50.150
166 343 178 7.3E-12 –
SUPERFAMILY
SSF53335
423 561 139 9.08E-8
IPR029063

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0145200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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