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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0160300 |
| Transcript ID | LotjaGi4g1v0160300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein DnaJ; TAIR: AT2G01710.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|P0CB24|Y4865_ARATH Uncharacterized protein At4g38065; TrEMBL-Plants: tr|A0A1J7G087|A0A1J7G087_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0160300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:28595374..28596632) extracted from Lotus japonicus Gifu genome v1.2.
ATATAACTGGCTGTCTCCTTCCCCAAAATTGTGTTACCCTCAATTAGAAAAAACCTCGAGAGGGGAAATGGAGACAGGTA ACGGCACCTCACCCAACAGATCCGAATCCGAACCCGATCGGCTACTCAGTTCATGCAAGGAGCTTCTCTTACGCCGCGAA TTCACTGCCTGTCGTGACCTTGCCCGTAGGATCCAAAGGTCCGACTCGAACATCAGTGCTCAAGTTGACCAAATCCTCAC CATCGCTGAGGTGCTTGGCTCCTCCACGCGCCGCCCCGGCACCACTCACCTGGACTGGTACTCCATCCTTCAGCTCAGCC CGGCTGAGGCAGCAAACCGTGAAAACGTGCGTAATCAGTTCAAGACACTCATGCGCCTCCTGGATCCCAGCAAGAATAAT TTTCCACTGGCGGATGACGCGTTAATGCGTGTGCGCGAGGCTTGGTTGGTGCTCTCCGATCCGGTCCAGCGAGCCCGGTT TGAGTGTGAGTGCCGCCGCGGTAATGATCACCCTGCGACGAGTTCGTTTTGGACGATGTGCCCGTATTGCTGGTACCTGC ACGAGTATGAGAAGAAATACGAGGATTGCACTTTCCGCTGTGGGAATTGCTTGAGGACGTTTCACGGTGTGGAGGTGAAG GCGCCGGCTGCGGAGACGGTGGTGCAGGGGAAGGATGAATACTATTGTTACCACTTAAGTTTGCCGCTGAGGTATCCTCT TGAAGAAAGCCAGAGGGTGGTTTTTCAAGGCAATGCTCAAAAGAGGTTGAGGATAAAAACTGTGGCTAACAGGGTGCCCA TGAAAGTGTTTATGGAGCCTAATGGTGAGTCCGATATGTAAGGGTGAACACTTCAAGTTTTAATTGTGCTGCTTCTGGGG TTGCGGTAAAAGAGTAACTTTATGTTGTAGTTGTTAATTATGTGTTTTAGTTGCTAAGAAGGAAATGGGGCATGTCATGC ATTGCTTGTAGTATACAGTTTTTTGCAATGCTGTAACTGTAATCTGTGCATATTCGGAATGAATTCGGTATCTTTTGCTC GATTGTGTGTCATACTTTTTGGTGAAATCAAGATCAAGATTACTGGTGTTATATGTTCTCATATAAATAGTGGAAGAGGT TGTGTTTGCTGTTTTTTATTTCCAGTTTGCTGGGATTTATTAAATTGGGTAGACATACTGAAGTATGGCGATTAAAATTC TTTGATCATCTGGATGAGTGGCTAATTTTTTTTATGACAAACTTGTATCTTGTTAGAAC
CDS sequence (LotjaGi4g1v0160300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGACAGGTAACGGCACCTCACCCAACAGATCCGAATCCGAACCCGATCGGCTACTCAGTTCATGCAAGGAGCTTCT CTTACGCCGCGAATTCACTGCCTGTCGTGACCTTGCCCGTAGGATCCAAAGGTCCGACTCGAACATCAGTGCTCAAGTTG ACCAAATCCTCACCATCGCTGAGGTGCTTGGCTCCTCCACGCGCCGCCCCGGCACCACTCACCTGGACTGGTACTCCATC CTTCAGCTCAGCCCGGCTGAGGCAGCAAACCGTGAAAACGTGCGTAATCAGTTCAAGACACTCATGCGCCTCCTGGATCC CAGCAAGAATAATTTTCCACTGGCGGATGACGCGTTAATGCGTGTGCGCGAGGCTTGGTTGGTGCTCTCCGATCCGGTCC AGCGAGCCCGGTTTGAGTGTGAGTGCCGCCGCGGTAATGATCACCCTGCGACGAGTTCGTTTTGGACGATGTGCCCGTAT TGCTGGTACCTGCACGAGTATGAGAAGAAATACGAGGATTGCACTTTCCGCTGTGGGAATTGCTTGAGGACGTTTCACGG TGTGGAGGTGAAGGCGCCGGCTGCGGAGACGGTGGTGCAGGGGAAGGATGAATACTATTGTTACCACTTAAGTTTGCCGC TGAGGTATCCTCTTGAAGAAAGCCAGAGGGTGGTTTTTCAAGGCAATGCTCAAAAGAGGTTGAGGATAAAAACTGTGGCT AACAGGGTGCCCATGAAAGTGTTTATGGAGCCTAATGGTGAGTCCGATATGTAA
Protein sequence (LotjaGi4g1v0160300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METGNGTSPNRSESEPDRLLSSCKELLLRREFTACRDLARRIQRSDSNISAQVDQILTIAEVLGSSTRRPGTTHLDWYSI LQLSPAEAANRENVRNQFKTLMRLLDPSKNNFPLADDALMRVREAWLVLSDPVQRARFECECRRGNDHPATSSFWTMCPY CWYLHEYEKKYEDCTFRCGNCLRTFHGVEVKAPAAETVVQGKDEYYCYHLSLPLRYPLEESQRVVFQGNAQKRLRIKTVA NRVPMKVFMEPNGESDM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 254 | 244 | 3.7E-107 | – | |
| PANTHER | 11 | 254 | 244 | 3.7E-107 | – | |
| SUPERFAMILY | 70 | 140 | 71 | 3.27E-11 | ||
| Gene3D | 71 | 153 | 83 | 4.5E-10 | ||
| SMART | 75 | 134 | 60 | 1.6E-4 | ||
| Pfam | 76 | 138 | 63 | 1.1E-8 | ||
| CDD | 76 | 131 | 56 | 4.44701E-6 | ||
| ProSiteProfiles | 76 | 142 | 67 | 9.479 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0160300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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