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LotjaGi4g1v0161200.1

Overview

Field Value
Gene ID LotjaGi4g1v0161200
Transcript ID LotjaGi4g1v0161200.1
Lotus japonicus genome version Gifu v1.2
Description Nicotinamidase 1; TAIR: AT2G22570.1 nicotinamidase 1; Swiss-Prot: sp|Q8S8F9|NIC1_ARATH Nicotinamidase 1; TrEMBL-Plants: tr|I3T449|I3T449_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0161200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:29108377..29113754) extracted from Lotus japonicus Gifu genome v1.2.

TGTTGATTGAACAAAGAATGGTTTATTATCAATCATCGTCGTCAATTTGGACCTTAATCGAACCGCCACCACCATGGGCT CTCTCACTCTAACGTTGCAGCTCGTGAAGGAAGAAATCCCGGTGAAACAACAACCTCTCCGTTTGTCCGGTGACATCAAA ACTGGTCTCGTCCTCGTTGACGTAGTCAATGGCTTCTGCACCGTTGGTGCTGGCAATATGGTCAGTAATTTCAATTTTTA ATTGGTTTCATTTGTCTCTTTGAATCTTGATCGGATGATCCACACTTTGTCTCTTCCATTGGCCTATCCTCCTTCTATTT CCTATCAAATCAAATTATATATTATATATATATTTGAATTTGGTTGGTATATAATATATTGTGATTGTAATTGTGATTGT GATTGTGATTATGATTGTGATTGTTTGGTAATTGTCTTTATTGGTGGTGATGATGATTTTGGTGTTAATTACTTTGATTT TGTACAGGCTCCGACAGAACCCAATGAGAAAATTACCAAGATGGTAGAGGAATCTGTGAGTCTTTCGAAAAAGTTTGCTG AGAAGAATTGGCCTATTTTCGCTTTCCTTGATTCGCATCACCCGGATATTCCAGAGCCCCCTTATCCTTCACACTGTCTT ATTGGATCAGATGAGGGAAAATTGGTTCCTGGTAATTTGTTTTTTCTCTTGTTTTTAGTTGTTTTTCGCCCTTATAAGCT TCAATATAGCCCAGTTTTTTTTTTTAATTAATTCCTAGTTTGTTTTTTTTAAAGCAAAATATATTTATTGAATGATGAGA GCGTCGAGAACCAAGTCCTCTAGAGAAAGAATTACAAAACCCATAAAGAGGCAAATCAACTAAGCCTGGGTAGCTCACAT GGTTGAGCTAAGGGTAATTGCAGGTGAAGGGTCAGAGTTCGAACCTTGAGAAGAGATAATTTATACTAATTTACTAACAA CTAACATTTTCCTATAAAAAAAACTAAACCTCTGCGGAAACAAAACCGCCAATAAAAAGAGACAAACTCAAAAGTCTACC TTAGCCAATTAGTTCCTAGTTTGTATTAGTTTATCAACTAAATAAGTATATGGATCTTAACTTACTATTTACTAACAATT CTTGTAAGTTTATATTTAGAAATTTATGTTTAGGAAAATTTTGTTACACATCCCATGAAGGTGATACACACTTCAAATTG TAGTAGAGAGAATGAGATAGGAAGAGAACAGTGAAAGATATGTATGGTAAAGGAAGTGAGAGATAAATAGGAAAAATGAG GTGAATGAAGTTGTGTCTAAAACTCAGATTGTAATTTTTACTGGCTCCAGAATTTTTACTTGGAATGGGGAAATGGGGAG ATGTGCTTGATATTGGGATTGTTTTTCTCTGCCCTGATCTGGTTTGCTTTCATCTGAACTGAAGAGCTCCTGTGGTTGGA AAATGAGCCAAATGCAACGCTCAGGCGAAAAGAATGCATTGATGGATTTCTTGGTTCATATGAGAAAGATGGCTCCAATG TGTTCGCTGATTGGGTGAAAAAGAATCAGATAAAACAAGTAAGAATTTCCTTTTGTTATTGAAATTTTGCTCTGTTACTG CGACACCATCTACAAGCAAGAAAGTGTCACGTTATTGTAGTGACAAAGGTTGGAGTGGCTTTTAGTTTTACAAAGCACTA GCATCATATAGTTCATTGATTGACACTGTAAGAGGTTTTGGTCGTTGCAGTTTTCCCTCATTACTCATTAGTCATTAGGG GATTTGGGTCTCTAATTTTTTCTAGGTACTACAAGATCAAGATCCTATATGTTTATACCATTATGATTTTTTCCATAGAG ACCAACATCTTAATTAGATGTATTATAAGGATCAATCCTTTTTAGAAGAATAAGGACCATTTCTTTTAATGAATAAAAAG CTATAAAGATTAAGACTCAAATATATGAAAGCATAAGCAGTGCCACTTACTCATAGGAACTAAGAGCAAAAGAAAAAGTG TATTGGGATCTAAACTCAAATGAATCAAAACTATGAACTGTAAGGATTAAAATCTTCTGTGAACCAAGGTATTGAGATCT TTTACCGTGGCCAAATTAAATTCTTTCTTTCATATCTGTTTTCTCAACAAATTTGTGTACACTTGTTTTTGGCATAGGTT GAATGATTTTTGGAATCTTTGGAGATTCTTTGTGAATATAATTTTCACTTAATGTTTTTGGTTGAGGTTCTCAGGTTCTG GTTTTTTCTTGTTGCAGATTTTGGTTGCTGGGATATGCACTGATGTATGCGTGCTGGATTTTGTCTGTTCAGTTTTGTCT GCGAGAAATCGCCAGTTCCTTCCGCCTCTGGAAAATGTGATTGTGTCCACCGAAGCTTGTTCTACTTATGATGTTCCACT ACATGTAGCCAAGACTAACAAGGATTGGGTGTCCCATCCGCAGGTACTTCTTGGTCAAATTAAATTTTGGTTTTTGGTGA AACACTTGATTATCTTCATGTTGCTTTGTTTCAACTTATATCTTCTTATTTTGATCAACTATTCTTTGTCATAATCAATT CTGACATCGATAAGCTACTAATTGAAGCTTCTCACGAGAATTGATTTTGGCTATAAAATCAATTGTCAAAGGACTTTCAA ACATTAATTACCTAAATTCTGTACCCGGAAGAGAATTCTATCCCCATTCCTAGTAGTAGATATCATATTCATAGGTAGGC ATAATCTAATTATTTAGATGTTTGGACTTGGAGATGGCAAGTCATCAGAGATTCCAAGTCCCTGAATAATGTCTAAGAAG CTGACTCATGTAGTTAACATGTCTCTGTTATCTCCTATCAGGAAAACGCAGCATTAATCTCTATAGTTCTGAATAGTGAT ACTTTCTTCAGACCTTGTTTTGGCTGTCATTTTAAACACGCTTGTCTAGTTTGTATCTGGATTAATTTCATCCTTAGCAA TGGGACACTAGAAATTAAGAAACTTTTGTGCCCAGGACATTCATTAAGGGGTGAGGTTGACCATATTAATAAGTAGGGAT TCTTCTGAGATTTTATGTGAATAACATTTGTCAGCAATAACCTTGTTTGTGCCCTTGTGAGTTGTAACTTGTATCATGAT GATCATACGTGAAAAGTTTTAAAAATTCTAACAAAAGTTTGTGATCAAATTGATGGTTGATTTATATGTTTCTATGATGA TGATGATGATGATGATGATGATGATGATGATGATGATCCAGGAACTGATGCATCACATTGGCCTTTACATAGCATGTGGA AGAGGAGCCGAGATAGCATCAGAGGTGATATTTGAATAGTTTAGAAGTATTTAGACCCAAAAAGGGAATATGTGGTGTGA GTGGAGTGATTGATAGAGCATTCAATGTTTTGAATAATTGAGAGATGTTTAGACCCGCAGAATGGGAATAAGTGGGAATA ATGGAACGATTGAGAGAGCATTAAGTGTTTGTATATTTATGCTACAATGCTTGCTAGGATACCACAACACTTAGTTTGGG TATGATATATGAGATGATGTGTACCAATCAAATAAATCCAGAGTGTAATTAAAAAAAGCATTTTCTCTTTTTATTTTTAT GTTAAATAAAAGTTATTATTAATTTCATTATTTACTTAGTAATCCCCAATTAATGTACCAATTGAGAATGCCCTAGTCTC CAAACACCTCTTCTCCAAAAATCTCTACGTCTTTAGCCTGAGTCATCAATTTCTTTTTCCTTTTTTTGATAATTGTGAGG GCTAATGCCCAGGAAACAGATTAAACGAGTTTGGGAGAAGAACTCCCCATTACATCATTACTAAGAACCTGAACTAGAAA CAGTGGCATATTAGCAAAATATGGGCATATAGTTTGAGAGTCATCTTCAATTTCATTTTTCTCCTCCCACTACTTCACAA GTCATAGGTCTTTTCTCTGTTATTGTGACTTGTTTTTCCCCAAATTCTTCCATTTAAAATCGTTAATTTTCCAAAATGAA ACTTTGTTCTTCAGAAGCAAAAACATAACAGATCTGAGTTTCATAAGCAAAAACTTTGTTCTTCATAATCTTCTTTCATC CAACATCTCCCTTTCATGGCCTCTTTTCTTCTTAGTTATGATTTGGGTGAAAAAGTGGGTTTCATTGCAGATCTGGGATT GAAGAAGAAGAAGTGGGCTTCACTGGAGATCTGAGGTTAGGGTTGCGGTGGGAGAGAGAAACCCAATCCTCCCCAACCTC AACACCACCATCCAACGAGAAACTCAGAAATCTATCACCAAGCTTCAACCTTTTCTTTGATATATGTTCTGTCCCTCCCG GATCTGCCCCCCAATTCGTAAAAACCACATCAGGGTCTGCAAAGTATGAATCTTCATGGTTCAAAACCGGTCCAGGAAGA CCCATGTACCCACGGGAGAGGCTTGGGAAATCGATGTTTGCGGCTATGATAAAAGCAATACCATCGTTGGAAGGGCAATA AGATGATGAGATGATTGAGAAGGTGTAGCGGCATGAGAAAGAAGCAGTGGAGTTTGTGAAAGGATCAAGAAATCGAACTG GGTGTGCATAGAAAGGTCTAGATCCGATTTGGCGATTCATTCCTCTTTTTATCTTTTCCAGATCTGTGTTGTGGAGAGCT CAAAATTTACAGCGGCGGGCGCGGTCATGACTTGCGACAACGACGTGGCTTCTCCAAGGGTTCGAAGGTGGATGAGAATG TTGGATTGAAATGAGAAACCTTATCTTTCTCTTAGTCTTTGTTGATAGTTTTTTGTGAAAACCCAAAATTACTCCTTTTA ATTTGGGAATTTAATGCAAAATTCATTTTCTCCGTGACTCATAGACTTAGTGTGGAGTCGTAAGTCTATCCGAGTTTACC GAGTCAGCATGAGTTTGCTCGATTCCTTGATGTACCGGAGTGAGAAGAGCGATAAAGTCAAGGAAACTGACATCGAAGTT CATTGGACCATACCAGATCATCGAGCGAGTGGGTAGCGTAGCTTATCGTATTGCGTTGCCACATTTTCTATCCAAGATTC ATGACGTGCTACACATGTCACAATTGAGGAAGTACATCTCTGATCCCTCTCATATTATCAAGGAAGACGATATTCAACTT AGAGAAAAACTTGTCTTTTGAAGTGACGCCAATAAGGATTGAAGAACATATCCGGAACTCTTCGTTGAGGCTTAAGTTTC GAGGACGAAACTTTCTTTTTGGGGGGGTAGTAATGTAAGACCCGGATAATTTAGCGATTAATTAACTAGATATTTATCGG TTTAAAACGATGAGCGCTATTAAGCTTAAGTTGACAGGTCATTTATGCTTTGTGTGTTTGAATAAATGAGTGTATTATTA ATATTATTATAATTCTCT
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0161200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGCTCTCTCACTCTAACGTTGCAGCTCGTGAAGGAAGAAATCCCGGTGAAACAACAACCTCTCCGTTTGTCCGGTGA CATCAAAACTGGTCTCGTCCTCGTTGACGTAGTCAATGGCTTCTGCACCGTTGGTGCTGGCAATATGGCTCCGACAGAAC CCAATGAGAAAATTACCAAGATGGTAGAGGAATCTGTGAGTCTTTCGAAAAAGTTTGCTGAGAAGAATTGGCCTATTTTC GCTTTCCTTGATTCGCATCACCCGGATATTCCAGAGCCCCCTTATCCTTCACACTGTCTTATTGGATCAGATGAGGGAAA ATTGGTTCCTGAGCTCCTGTGGTTGGAAAATGAGCCAAATGCAACGCTCAGGCGAAAAGAATGCATTGATGGATTTCTTG GTTCATATGAGAAAGATGGCTCCAATGTGTTCGCTGATTGGGTGAAAAAGAATCAGATAAAACAAATTTTGGTTGCTGGG ATATGCACTGATGTATGCGTGCTGGATTTTGTCTGTTCAGTTTTGTCTGCGAGAAATCGCCAGTTCCTTCCGCCTCTGGA AAATGTGATTGTGTCCACCGAAGCTTGTTCTACTTATGATGTTCCACTACATGTAGCCAAGACTAACAAGGATTGGGTGT CCCATCCGCAGGAACTGATGCATCACATTGGCCTTTACATAGCATGTGGAAGAGGAGCCGAGATAGCATCAGAGGTGATA TTTGAATAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0161200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGSLTLTLQLVKEEIPVKQQPLRLSGDIKTGLVLVDVVNGFCTVGAGNMAPTEPNEKITKMVEESVSLSKKFAEKNWPIF AFLDSHHPDIPEPPYPSHCLIGSDEGKLVPELLWLENEPNATLRRKECIDGFLGSYEKDGSNVFADWVKKNQIKQILVAG ICTDVCVLDFVCSVLSARNRQFLPPLENVIVSTEACSTYDVPLHVAKTNKDWVSHPQELMHHIGLYIACGRGAEIASEVI FE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR47297:SF2
7 242 236 7.6E-125 –
PANTHER
PTHR47297
7 242 236 7.6E-125 –
Gene3D
G3DSA:3.40.50.850
28 214 187 4.2E-28
IPR036380
SUPERFAMILY
SSF52499
29 233 205 4.71E-24
IPR036380
Pfam
PF00857
30 207 178 2.9E-29
IPR000868
CDD
cd00431
32 206 175 4.85365E-31 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0161200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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