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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0162800 |
| Transcript ID | LotjaGi4g1v0162800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleobase-ascorbate transporter-like protein; TAIR: AT5G62890.1 Xanthine/uracil permease family protein; Swiss-Prot: sp|Q27GI3|NAT6_ARATH Nucleobase-ascorbate transporter 6; TrEMBL-Plants: tr|A0A151UD00|A0A151UD00_CAJCA Nucleobase-ascorbate transporter 6; Found in the gene: LotjaGi4g1v0162800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:30338310..30344914) extracted from Lotus japonicus Gifu genome v1.2.
GGAAGAGCTGGCTTCCTTCTTTTTCTTTTCTTTCATATCTTCACACTCACTTTTAACTGTTTTCTTAGCCTGCATGTGGA TCTTGGGCTAAGAAATTAAATCCTCCAATACTAGCTGCATTGCAAGAGCGAAAGAAAGTATTCATTGTCATTGTTTGAAT TTCCCAAGAGTGAAGAAAGTGTACATTTTTCTCTCTTTCTTTGAGGGTGTCCTCAGCTTGATCATCTCTTCGTAGTGGAA TTTTGATTTCTTCCAACGGGTTTTGTTGGTTACTGTGTCACTGTTGCATGACATTTTCTTTAGGTTGAGAAATTGTTCTT GGGAAACGTTAATCTCCTAAAGCTTTGCTTTTTGTTCTATTGGGTTATGAGAAAGTTTGAGTTTTGGTTGTTGTTGAGCA TTTGAGTTGTTGTTAAAGTTCATTGGGGTTAGATACGCGAAGAATGGCAGGAGGGGGAGCTGCACCTCAACCCAAGCAAG ATGAGCTTCAGCCACATCCAGTCAAAGATCAACTACCAAATGTTTCTTACTGCATTACTAGTCCTCCTCCATGGCGTAAG TGAACTACCAATTCATTTGAACATTTTTATTTTCTATTCTCTTTCTGATCAGAAGTCTCACATTAACTAGAGATATAACC AAACATTTTCTTATAAAGGGTATAAAGAAACTCTCACCCGTGAGCTAACTTTTGGGGTGGAGTTAGGCCTAACCCGAATT ATAAGATAGTATCATATCTTATCCTAATTCCGTTTATTGGGCTCGGGTAGAGTTAAGCCTAACTTAAATTCTAAGATTCT ATCTAAAATCTTTTGGCATATAGGTTCAATAGTTATTTAACAATTTGATGAATGATGCTTCTTCCTTTGCTGCATTTGAT TTTTTATGTTAATGAAGCGGAGGCAATCCTACTTGGTTTTCAACATTACCTGGTGATGCTTGGCACAACTGTTCTGATAC CAAGCTCTCTAGTTCCCCAGATGGGAGGAGGAAATGTAAGTCTTGAGGCAAATGGTTTTTTTAAACATTGTGGTGTTGTC CATAAATCTAATAAAACTGTAACAATTTTGGTTAAATAGGAAGAGAAAGCAAAAGTGATTCAGACTCTGTTGTTTGTGGC CGGCATAAACACGTTTTTCCAAGCATTATTCGGGACTCGTCTACCTGCAGTTATTGGGGGATCCTACACCTTTGTGCCAA CAACCATTTCAATCATTTTGGCTGGTCGCTACAGTGACATTGTGAATCCTCATGAGGTTGGTTTGTTTATCACAAACCTT GTTGATCTTCACCATTTTTTTCTGCTTTTGTTGTTTCGTCATCCTTGGTTACCTCATGTGTAAAAATTGTGCAGAAATTT GAGAGGATAATGCGCGGAACACAGGGTGCTCTTATTGTGGCTTCAACCCTCCAAATTGTTCTTGGCTTCAGTGGCCTTTG GCGCAATGTAGTGAGGTTCTGCCTAAACTACTTACACTTTTTGCTCCATGTTCTCGTTACAATTTTTTCAAATTAAGTTT TTAAGAGATGATTGCGATTTAATTTTTTGGGATGGATCTTATACCGCTGTAATATATTCTCAATTGTAGATAATAATCCT TATGTTAATGGGTATATGATGAGTACTTGGAGTTAGTTAGTTAGTTAAGGGTTAGCATTTAGAGTTAGTTAGTTAGTTAT GGCTTAGCCTATAAATAAGAGAGTGTGAAGAGGGTTTAGGTATCTTTGGGATCATTTGGGAATTGGGAATTAGGAGAGTG ATGAGTCTCTCGAATACACATCTGTTTCTTGTACATTTTTCTGTTGAATAATATCAGGGTTTCATCAATTGGTATCAGAG CACCGATCTAGGTGCTGTGATTGCCATCAATTCGTGAAGATGTTTCCAGAATTTGATGGAAGAGAGGCCTACGGATGGCT CATTATGGTGGAGCAACACTGTGAGGCCAAGGGAGTATCCGAAGAGGAGAAATTCTCAGGGGCAGAGAAGGCTTTGACTG GTGAAGCTTTCATGTGGTGGTTTTGCTGGAGAAGACGCAATCAGAAGGCAACATGGTGGGAATTTGTGGAGGCTCTGTTG AGGAAATTCGAACCAGAATTGGAACCGTACATGCCAGAACCAGTCCAAGATTCAGAGGAGGAAGAAATCCCTGGGAAGCA AGAAGTCTTGGAGGCAGAACGAAGAACTGTTGTGGTGGAAGCCAAACCTGAGGCCAATTCAGTGCTGTTGGCGAAATCAG AGATCAAGCCATATTCGCCGGAGAATTCTGAGATGGAAGCGTCGCGGAAAGACTCGGAGTTTGCAATGGCGGCGGAGCAA ACAGCGGAGGTGTCACGGTGTCAACCGGTCACCGTGGTTGATTACATCGATTGCACGTTGACGGCGAAAGGGGAGAAGAT CGACGCCGAAGGGGAAATCAAAATCAAGCGGTTACAGGAAGGTTCTTCAATGGAGAAATGGCAGATTTGCAGCATTCATG GGAGGAAGAAGGTGCAACCAATCGTTTTGCCCCAAATCAGTGATTTAGGATTCGATTGGGAGAGACGGCCGCCGCGGAAA CCGCCGGATTCATGTCTCTGCACGGCGGTAACCGCCAATCGACTGCCGGACACGTTCATTCAGACCTCTGTTCTTTGCTC TTCGATGGTTGCCATTCAACTGGAGACTAAGCCACCAGACCGCAGTGGTGGCAGCTCACACTTCATCCTTGGCGATTCTT GCAGATCGGACTTGGTGGCCAACCGTCCTCCAGCTATGTCACCGGATTTGGCTGAGACAGCGGTGGTGGGATACTGTGGC CTCGAGTTAGTTCGCACGGAGGAGAGTAAAGGGCGCTCGCTCATTCGCAAGTCGGTAACCGTTTCACGGCCGCCGGCGAA GCCACCGGACTTTGCAGTTATGGCGGGGGACGTTCGTTTCCGTCGTCGCTGGTTGGGTGTGGTCTTTCCGTTGTCTTCAC ACGCACACGCGTTCACACGAAGCAGAGCAAGGCTGGCTCAGCTAGATTTTTCAGAATTGGGTCAAAGTTTGACCACAAGG CCAAAGCCCATAATGCTAAACAGAAGGAACGGGCCCAAGAGGAACTTTTCTTTCTCAATCATCTACAGACCAGTTCATTC CCTTACTCTAATGGGCCAGGCCCAACTGTTGGAGTATTTGTTTTTTGTTTGTTTAAAGAAGCTTGTGTTTTACCCCACCT TGAGGACAAGGTGGATGTTTAGGGGGGAGTATTGATGAGTACTTGGAGTTAGTTAGTTAGTTAAGGGTTAGCATTTAGAG TTAGTTAGTTAGTTATGGCTTAGCCTATAAATAAGGGAGTGTGAAGAGGGTTTAGGTATCTTTGGGATCATTTGGGAATT GGGAATTAGGAGAGTGATGAGTCTCTCGAATACTCATCTGTTTCTTGTACATTTTTCTGTTGAATAATATCAGGGTTTCA TCAGTATATATCAACATTTTTTCTTTTAATTTACTCAAAACTATAGCTAATCCCAGTTTCAATTATACTCATGGACACTA ATTTATCCTTCCTGATATTGTTATTAGCTTGTTTTAGCGTCTCTAAATCATACTCATTAGAAATTGCTTTCTTTTTGTTC AAATTGCTTTCTTTTTGTTCAGGTTCTTAAGTCCTCTCTCTGCTGTTCCTCTAGTTGCTCTTTCAGGCTTTGGGCTATAT GAACTGGGATTCCCTATGGTACATATATTTGAAACAAGAACTAGTCCATATTTGTTTTAAAATTATAATGTAAAAATTCA CACTTTGTTGATTGTGGTTTTGTAAATTAAGCTTGCAAAATGTGTGGAGATTGGCCTGCCAGAAATCATTATCCTGCTAG TATTTTCACAGGTGATTCATAAAATTGTAACCTTCTTAATGCTCTTTCTTTGTTTTGTGTTTTACTCATATTTAAGTACT GACATGTTTTTGCAGTACATTCCTCGCATGATGAAAGGAGACAAGCCTATTTTTGATCGCTTTGCAGTTATATTCTCAGT GGCGATTGTGTGGATTTATGCTCATCTTCTTACTGTTGGCGGAGCTTATAAAAATTCGGCTCCTAAAACCCAAATCACAT GCAGAACAGATCGAGCGGGAATTATAGGTGGTGCTCCTTGGTAAGGATCTTCATGTTGATTTTTTAACCATATAAATGTA ATTTCTTCTTTTAATATCATTATGACTTTCTACCTACAAGCTAGTTGATGAATCTTGACAATTTTGTACCTGTTTAAAGA AATCTTAAGTTACAAGGAATCAAGGATTTCAATATATTTATTACCTTAGTACAGTTGTTGACAAAATACATCATGCAGGA TAAGAATCCCATATCCTTTTCAATGGGGAGCTCCTACATTTGATGCTGGAGAAACTTTTGCCATGATGGCTGCTTCATTT GTTGCTCTAGTAGAGGTTTGTTTGATTTTATCTCGATGAGCTTGATATGCTTTATTCAGCCAGAATGATGGTTTTTGATC ATTATCCTGCTAATTTTTGGCGGGCACATATTTTTACCTGACCCTTAGAGCATCTACGTGAGGGATCGAAATTCCAAATT CTCTGTCCCCATTTGGTGTCCCCTTTCATGTCTCCCAAATCAAATTGTGGCATGTAGTATACTTAATGAATTTGCTTGCT CCACAGTCAACTGGTGCTTTCATTGCTGTGTCAAGGTACGCGAGTGCAACACCGATTCCACCTTCAGTGCTTAGCCGAGG TGTTGGTTGGCAGGTGAACACAAAATTATATGTTGTTATTGTCGTTGTTGTCGCTGTTTTGATCCACCTAGTTTTTTGGT CTTATCTTTACTGATCATGCATTTTCTGCTTGCTTTAGATAACTGTCATACATTGTTTTTTTCTGATATATCAGGGAGTG GGAATTTTGTTGTCTGGGATCTTCGGGACCGGGAATGGATCATCAGTTTCTGTGTAAGATTCTAATTCAATACTTCCATG TTGTTGGACTATTTTCCAGTGTAGCATAACATCACTGGCCTTTTACCAGTGAGAATGCAGGACTCTTAGCTTTGACACGC GTGGGTAGCCGAAGGGTTGTTCAAATATCAGCTGGATTCATGATTTTTTTCTCAATTCTTGGTAAGGTTATTGGCAATTC TGATTTGATTCTGTTTCCTTGTTGAATATGAACCTAAACACTTGTTATAACCTACCATATGTAGGAAAATTTGGAGCTGT TTTTGCTTCAATTCCAGCTCCTATAATTGCAGCTTTGTATTGCCTTTTCTTTGCCTATGTGGGTATGTATTATCAACTTA AAAGAAGCTGGACTATTATCATAAAAATTTTAATCAAGCTTGATTTGTTTAATCCTCTCTTATGTTCCCACAATATTACA GGCTCTGCAGGTCTCAGTTTCCTTCAATTTTGCAATTTGAATAGCTTTAGAACTAAATTCATCTTAGGCTTCTCTGTTTT TATGGGCTTCTCAATACCACAATACTTCAACGAGTATACAGCGTTCAAAGGCTATGGTCCTGTGCACACTCGTGCAAGAT GGGTACAATTATTTTCTCATTCTTTCTCTCATTTAATTTCAATAAAAAATCTGCCCTCATCTTGTGGTATGCACCGTCTT AACATATTTAGTCCAATTATTACATATTTGCATTTATGTTGAAGCATAGTACAATTAAATTAAATAAAAGATTCAAGGTG TGTCCACCTTCAGTGTAAACTTTACATACACAATTATCCAATTGAATTCCGTCAAATCAGAAAATATATTTTTATTTTAA TTACAATTTCAAACAAAAGTAGTTTTTCATCCTTCGTGGCGTACCGTGATTGATTGTCAGTGTAAGATTATTTTACAATC ACACTGCATACACATGAAACTCTAAGAATTAAATATCTTATCTTAGAATTTGGTTTATTTCTAATTCTACCTGAAAAGAC AAATTTAACTAAAAATTATACCCTTTATGTAGACTTATTTTGACATACCTCTAATAAATGTTGGACTTGTAAGCATATTG CTAAATTACATTCTTTTGTGAATGCGGTGCTCAAAGTAGAATAACAAATCACGAGCTTAATTTGAACTTATAGTTTAAGG GTTTAGGAAAGTTAACCATTAACAATAATTTTCACCTGTTTCCAGTTCAATGATATGATCAATGTCCCATTTGCATCTGA AGCATTTGTTGCTGGTACATTGGCACTGTTCTTGGATGTTACATTGCATAAGAAAAAAGACAAACAAACTCGTCAAGACA GAGGGCTGCAGTGGTGGGACAAATTCCGTTCATTCAAGACAGATACAAGGAGCGAAGAATTTTACTCTCTACCTTTCAAT CTAAACAAATTTTTCCCTTCGGTATGAGAGATAAAACCAGATCAATATCTCTTCGCGGCACATGCTATAGGTAACTTTCA CATTGATGTAACAATATATATGAACTTAAAAAAAAACAATATATATGAATGTCATCATTTTGAGAGGTGCTTTATTTCTC CAAGCTGGTAATAGCTATTTATTTTTTACAAAATAATATAAAAAATAAATCAATTTAGTTGCTAACATGTAGAGGGGAGA AACTGTTCGTTTTCAAAGGAATCTTTATCTGACAAAAATCCTTAA
CDS sequence (LotjaGi4g1v0162800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGAGGGGGAGCTGCACCTCAACCCAAGCAAGATGAGCTTCAGCCACATCCAGTCAAAGATCAACTACCAAATGT TTCTTACTGCATTACTAGTCCTCCTCCATGGCCGGAGGCAATCCTACTTGGTTTTCAACATTACCTGGTGATGCTTGGCA CAACTGTTCTGATACCAAGCTCTCTAGTTCCCCAGATGGGAGGAGGAAATGAAGAGAAAGCAAAAGTGATTCAGACTCTG TTGTTTGTGGCCGGCATAAACACGTTTTTCCAAGCATTATTCGGGACTCGTCTACCTGCAGTTATTGGGGGATCCTACAC CTTTGTGCCAACAACCATTTCAATCATTTTGGCTGGTCGCTACAGTGACATTGTGAATCCTCATGAGAAATTTGAGAGGA TAATGCGCGGAACACAGGGTGCTCTTATTGTGGCTTCAACCCTCCAAATTGTTCTTGGCTTCAGTGGCCTTTGGCGCAAT GTAGTGAGGTTCTTAAGTCCTCTCTCTGCTGTTCCTCTAGTTGCTCTTTCAGGCTTTGGGCTATATGAACTGGGATTCCC TATGCTTGCAAAATGTGTGGAGATTGGCCTGCCAGAAATCATTATCCTGCTAGTATTTTCACAGTACATTCCTCGCATGA TGAAAGGAGACAAGCCTATTTTTGATCGCTTTGCAGTTATATTCTCAGTGGCGATTGTGTGGATTTATGCTCATCTTCTT ACTGTTGGCGGAGCTTATAAAAATTCGGCTCCTAAAACCCAAATCACATGCAGAACAGATCGAGCGGGAATTATAGGTGG TGCTCCTTGGATAAGAATCCCATATCCTTTTCAATGGGGAGCTCCTACATTTGATGCTGGAGAAACTTTTGCCATGATGG CTGCTTCATTTGTTGCTCTAGTAGAGTCAACTGGTGCTTTCATTGCTGTGTCAAGGTACGCGAGTGCAACACCGATTCCA CCTTCAGTGCTTAGCCGAGGTGTTGGTTGGCAGGGAGTGGGAATTTTGTTGTCTGGGATCTTCGGGACCGGGAATGGATC ATCAGTTTCTGTTGAGAATGCAGGACTCTTAGCTTTGACACGCGTGGGTAGCCGAAGGGTTGTTCAAATATCAGCTGGAT TCATGATTTTTTTCTCAATTCTTGGAAAATTTGGAGCTGTTTTTGCTTCAATTCCAGCTCCTATAATTGCAGCTTTGTAT TGCCTTTTCTTTGCCTATGTGGGCTCTGCAGGTCTCAGTTTCCTTCAATTTTGCAATTTGAATAGCTTTAGAACTAAATT CATCTTAGGCTTCTCTGTTTTTATGGGCTTCTCAATACCACAATACTTCAACGAGTATACAGCGTTCAAAGGCTATGGTC CTGTGCACACTCGTGCAAGATGGTTCAATGATATGATCAATGTCCCATTTGCATCTGAAGCATTTGTTGCTGGTACATTG GCACTGTTCTTGGATGTTACATTGCATAAGAAAAAAGACAAACAAACTCGTCAAGACAGAGGGCTGCAGTGGTGGGACAA ATTCCGTTCATTCAAGACAGATACAAGGAGCGAAGAATTTTACTCTCTACCTTTCAATCTAAACAAATTTTTCCCTTCGG TATGA
Protein sequence (LotjaGi4g1v0162800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGGAAPQPKQDELQPHPVKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPSSLVPQMGGGNEEKAKVIQTL LFVAGINTFFQALFGTRLPAVIGGSYTFVPTTISIILAGRYSDIVNPHEKFERIMRGTQGALIVASTLQIVLGFSGLWRN VVRFLSPLSAVPLVALSGFGLYELGFPMLAKCVEIGLPEIIILLVFSQYIPRMMKGDKPIFDRFAVIFSVAIVWIYAHLL TVGGAYKNSAPKTQITCRTDRAGIIGGAPWIRIPYPFQWGAPTFDAGETFAMMAASFVALVESTGAFIAVSRYASATPIP PSVLSRGVGWQGVGILLSGIFGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIIAALY CLFFAYVGSAGLSFLQFCNLNSFRTKFILGFSVFMGFSIPQYFNEYTAFKGYGPVHTRARWFNDMINVPFASEAFVAGTL ALFLDVTLHKKKDKQTRQDRGLQWWDKFRSFKTDTRSEEFYSLPFNLNKFFPSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 44 | 44 | - | – | |
| PANTHER | 2 | 534 | 533 | 0.0 | – | |
| PANTHER | 2 | 534 | 533 | 0.0 | – | |
| Pfam | 39 | 443 | 405 | 1.8E-65 | ||
| TMHMM | 41 | 63 | 23 | - | – | |
| Phobius | 45 | 64 | 20 | - | – | |
| Phobius | 65 | 75 | 11 | - | – | |
| Phobius | 76 | 94 | 19 | - | – | |
| TMHMM | 76 | 95 | 20 | - | – | |
| Phobius | 95 | 99 | 5 | - | – | |
| TMHMM | 100 | 119 | 20 | - | – | |
| Phobius | 100 | 119 | 20 | - | – | |
| Phobius | 120 | 139 | 20 | - | – | |
| Phobius | 140 | 158 | 19 | - | – | |
| TMHMM | 140 | 162 | 23 | - | – | |
| Phobius | 159 | 163 | 5 | - | – | |
| Phobius | 164 | 185 | 22 | - | – | |
| TMHMM | 185 | 207 | 23 | - | – | |
| Phobius | 186 | 191 | 6 | - | – | |
| Phobius | 192 | 211 | 20 | - | – | |
| Phobius | 212 | 222 | 11 | - | – | |
| TMHMM | 220 | 242 | 23 | - | – | |
| Phobius | 223 | 246 | 24 | - | – | |
| Phobius | 247 | 366 | 120 | - | – | |
| TMHMM | 289 | 311 | 23 | - | – | |
| Phobius | 367 | 389 | 23 | - | – | |
| TMHMM | 367 | 389 | 23 | - | – | |
| Phobius | 390 | 394 | 5 | - | – | |
| TMHMM | 393 | 415 | 23 | - | – | |
| Phobius | 395 | 415 | 21 | - | – | |
| Phobius | 416 | 426 | 11 | - | – | |
| TMHMM | 427 | 444 | 18 | - | – | |
| Phobius | 427 | 443 | 17 | - | – | |
| Phobius | 444 | 469 | 26 | - | – | |
| TMHMM | 466 | 488 | 23 | - | – | |
| Phobius | 470 | 488 | 19 | - | – | |
| Phobius | 489 | 534 | 46 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0162800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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