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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0171100 |
| Transcript ID | LotjaGi4g1v0171100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ADP-ribosylation factor GTPase-activating protein AGD10; TAIR: AT4G17890.1 ARF-GAP domain 8; Swiss-Prot: sp|Q8H100|AGD8_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD8; TrEMBL-Plants: tr|I1KX25|I1KX25_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0171100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:33442493..33448923) extracted from Lotus japonicus Gifu genome v1.2.
GAACAAGATTTGCGGTTTCACCTGCAAAATTTCCTCCCCAAATCTATATTGCTCAGGAGGTGTTCCGGTTCCACCAAACA CCCCCTGAGATTCCACCGCAACAAAAAGAGCAAGATTTTCTTCAATTCAAATTCAAACTTCCATTTCCCTTTCGTTTTTC ATTTCTGTTTTGATTCTCATTTTCGGCCTCCAATGGCGTCTGAAGGTTTCACCGACAAGAACACTGTGTTCAGGAAACTC AAGGCGAAGTCTGAAAATAAGGTTCTTCTTCTTCCCCTGTAAAATTTTCATTTCAATTTCAATTTGAATTCATAGGAATT TTTTATTTCACTTCCAATTTTTCACGTGCATGCTGCGTTTTTTGTGATCGGATTTCAGATCTACGTTACCCGTGTATATG CGTTTGATTTCTGATTTTGTAGTGTTTTGTTTCAGATGTGTTTCGATTGCAATGCGAAGAACCCAACCTGGGCGTCCGTC ACGTATGGGATCTTCCTCTGCATCGATTGCTCTGCCGTTCATCGCAGTCTCGGCGTTCATATCAGCTTCGTGAGGCAAGT TGTTGCTTGGTTTTTGATTTTCTATGCGGAAAGTGTTTGTGTCAGTTAGCTATTTGATCACTTAGCTGATTCTGTGTTGA TAGTTTTATGTTGTGCAATGCTGAATGTGAAATTGCGGTTGGATTTAGCGGAAGTCTTTGTTTTACTGTGTTGTGTCATC TTTTATATCTTTCCCCATTTCAGATGATTAAAGCTTGAATAGTCAATGAAATTAATAATCTGTAGATTGTAAAGGGTAAA ATGATTCTTCAGTTCCCCTGAAAGCGGAATTCAATAAATAAATGATGCTGGATATTTATATTCTGCTTTCATTTTAGTGT GGTGGAGCGGGGGGTTGAGGAGTAGCATTGGTTTTACTTTTTTGTTGAAGGTTGGAATGCGGTTATTATTATTGTTTCTC ATAGCCTTTTTTTTATTTTCCTTGGGGTACATTATTGAATCAAGATAGGAGTCAGGATTGGATGAATGATTGGTGATATA AGTCATTTTCTTGTGCTTGAATTGCAATATGAGATAAGGATTTAGACTTAGAGTTGAGTGTAATGAAGCAAACGTGGAAC TAAGCTTGCTTCTCTAATGAGTAAAAGAGGTTTTGTAAGAGGTTTTGCACGAATATTTCAGTTGAGTTCAGGCTGAATGT TTGGATAAATTTGTGCAGCAGCCATTTGCCTAATAATATTCATTTTTTATGAGGGGATGGGGGTAAGCTGTAAGAACAAT TTCTAAATCTACAAGAGATTCAATAAACCTCAGTATATCAGCATAATTAACTCATATTTTATATTATTGTGCATTCCATG GGTTGTTTAAAAAGCATAGCAGTTTATCACTAAATTAAAACTTATCACCCTATGCTTCTGCATCTTTTGTTTTTCGCTTA ACTATTCTGTGAATTACACTAAAATCAGAAGGGAGGAAGTGGTAAAATAGAAGAATGAGGGCAGAAATGATTGATATCTA AATATTATATGCTTTATTATTTGTAGATCTACAAATTTAGATTCATGGAGTCCTGAGCAACTAAAAATGATGAGCTTTGG AGGAAATAACCGTGCTCAGGCTTTCTTTAAGCAACATGGTTGGACCGACGGTGGTAAAATAGAAGCCAAGTACACATCCA GAGCTGCAGAGTTGTATAAGCAAATTCTTTCAAAAGAAGTAGCCAAAAGTATGGCTGAGGTGGCTAGCTTGCCTTCATCA ACTGCTCCTTCTCAGTCTGGTCAAGGGGCTAATGCACTTTCTGATGCCAGGACCAATGAAGTAATGAAAAAAAACATTCT GGAGAATCCAGAAAAGCTTGAAAGCACTTCGTCACCTCGAATTGCACGTTCAGTAATTTCAAGTACTGTGAGAAAGCCTA TCGGGACAAAAAAGACTGGGAAAGGCGGGGGACTTGGTGCCCAAAAGCTAACTAGAAAGGTATGGATATTTATCTTTGTT TGCAGATTGTATACTGGAATTGTTTGTTGGTTTATCATTATCTTATTCTCCTTTTTAATTTGGTGATCTGAATTGTTGAC AAAGTATATCTATGAAATGCAGCCAAGTGAATCTCTCTACGAGCAGAAGCCTGAAGAGCCACCTGCTCCGGTTGCATCCT CAACAAACAACATTATGCCTTCTCCTTCTGGACCATCTCGGTTCGAGTATGTAGAAAATGTTCAATCATCCGAGTTGTAT TCTGGAAGTTCAGATGTAATAAGTCATGTGTCTGTACCAAAGTCATCAAGCTTCTTTGGAGACTTTGGAATGGATGGTGG CTTTCCAAAAAAGTCTGGGTCAAGTTCCTCAAAAGTTGAAGTAAGCATATATACCTGCAACTTCACTCCTGCATAAATTA ACTTTTACTGTATGTGGTCAGCATACAAAATTAAGTTAACCATGATTCTCTTCAAATTTTGATGCTTAGTTGTCATCTTG CTCAATGCCTTTAACTAGATACAAATCTATGGAGCAAAAGTTTGTGGTTGCAACTTAGTCAGAAAGTGCTAGGATGTAAA TATTTTTGAAAAGAAAAAATGCTAGTATACACATGTAGAATCATGTATTAAAATGCATTCCATGTTAATTACAAGAAAAC TTAACATTGCAAATGTGTTCTAAAATAATTGCGGACTTCCGTAAGTTTTAATGCAACATTAAGCTCTCTAAATATATTTT ATGAGGGTTTCAGTGTACTTTCAAAAACTTGGAGATTTGTGTTAGGTCAGGATGGCTGAATACACCCTGATTAGAAGCGA AATTATTGTTTCCTCTTATAATATCATTCTTTGATCTTGGTTTTTGATAAGAACCTTGGGAGAACCACACCACAAAAGCT AGCTGTTGTAGTTGGAGAACCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAAATTCCAATGTGGGACTCA AGTCCCATACCTTGCAATGGGGTCCTAACATCCCACCACGCTCCGCAGCCCCGGCGCCCACGCGGGCTGGCTGTGCACTA GCCCCTTGACTAGTCCCAGGCGAACACTGCAATGCCGGGGTCACCACTTGCGCCGCTCGTTTGCAGCTCAGAGACATGGT GGAAGGCTCTGATACCATTGATAAAAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGG CCTTATAAACCCCACATTAGAATCCCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATGGGGTCCTAACAGTT TTGCAGGATGACCTTCAACATTCTTTAAAAATACAATAGATAACTATGACTTCACTGAGAAGTTCCAGTAATAGGAAACT TAAACAAGTCTCAGCTTGAAAACTCTAGAAAGAAATTAACCATCATTACTTGGCAATTTCCTGTTACATTATCCCACAAC AAAGTATGGAGCGAAGTAACAAATATGCATCTGAACAAAGATAAACCAATAGGACCATAATTGTGCCTGTTTTAACATTG GATTGTAAACAAGCATTATTTCAGGCATAGGCTAAAATATATTAGATTAGCATTGGACAAATTAGTTCTTTTGCTACCAA ATCATAATGAATGCTTTATTTTTATTAAAAAAACTGTATATTTGTTTTGCACTCCTGTAACCTGTGAAAATTCACATATC TTGTCTGACTTCAATATATGTTGCCAGTCATCTATGGAACATGTAGTTAGTGGAATTTTACAAATTCATTTTACCTGCAC CACATGAATCTTTGTTTATCTTGTTTTGCGGTGTTCTGGTATAAGATTCAGGAATCTGATGAAGCAAGAAAGAAGTTCTC AAATGCTAAATCTATATCTTCATCCCAATTTTTTGGAGACAATAAGGCTGCAGATGTGGAAGCGCGAGCTACTTTGTCAA AGTTTTCAGTATGTGTCTTTTCTTTAAATAACTTGCTGGAACATATAGTGTTAGAAGTTTTCAGTATGTGTCTTTTCTTT AAATAACTTGCTGGAACATATAGTGTTAGATTATACATGAATGCAGATCTTAGATGTTCAATCCCTTTTATATCTTATTC TTTTGATTGGCAGAACTTATGTTAATGAGAAAATTTCCAAATTCGTCCGTAAGAAATTTGGTGATGAACACCCTGGTACC AAATACTAAAACCTCACCTTAGTCCCATGGGAACCACAAATATCAGTCATATTAGGCAGTGGATAACTATGATTGGCATT TGTGGTTCTTTTGGGAATAGAGTAGGGTTTCAGCATTCTGAAGTACTAATTTAAATTTATCATTGCGCCAAATTGCCCAA GGACGAATTGGGGGATTAACTCTAGTTTAACTAATACGAAAATTAAGGGCCAGATGTATAAGTTTCTTTCTAAATTTTAT TTCATAATAAATACGAATGGATTTTGTACTGTCAAACTAGTCCTTTCTTTGAAGACAAATTCTTCTAACTTATGTGTGTT CAATGGATCAGTTTTCTTTTCTCATGTCCTGTCTGTCTGTAAGGACCAAATTTTACAAATCACCATGATTGTGACCTTGG AAAGACATTATTATTATGAATAAAAGAGGGGCTGAAATTATTTCTGAACATCCTCAAGGAAATTTACTGTTAAACTAAAT ATTACTTTTTCAAGTATAACCCGCTACTGAGTGATGTCTATGACTGGAAATTCATTTGCTGTTTAGTTTTAATTTGGTCT TGTAAATATGCTTAAGCTAACTTTCTTTGTTATTGAATGTGTGTAGTAGTCAATCAATTTCATAGATGGGATTTAAACCT GTTAGAAGTCCCACATTGGCTAGAGATAGAGCATAGATAGCCTTTATAAAGGTAGTGCAAACCTTAACTCTTGAGCTAGC TTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATGGTATCAGAGCCTATCCTAGATCCATTTGTTGTTTGTTGTGGA GACTTCCCATATTTGGGGCACCCGTTGTTGTTGATCCCACGTTCCAGGTTGTTCAGTCCTGCACGTGAGGGGGTGTGTTA GAAGTCCCACATTGGCTAGAGATAGAGCATAGATAGCCTTTATAAAGGTAGTGCAAACCTTAACTCTTGAGCTAGCTTTT GTGGTTGAGTATAGGTCTCCCAATTTCTAATAAAACCAATCTTGCTTTTCTTGAAGATAGGAATTCTCTTAACTTGTTGA GATTATTCATTATGGGCCAGTGTTGGTTGAGTGGGATGGGTGAGAGAAAGAAGTTTCAATTTTCAATTTTTCATAAAGTG GTTTTCAGCATGAATAAATTCTTTTCTTTAATTGCTTCTGTATATTCTAGATTTGATGTGTTACCAAGCATGAATAAATT CTTAGTTTGAAGTTCTGTCTCTGAAACCTGGAATGGATAAGAAAAAGAAAATTGGGACGTGGGAGTTTAATGTATTAGTT GACATTTGACAGTGTTTATCCTCTTGTTACTTCCAGGGTTCGAATGCCATCTCCAGTGCTGATCTATTTGGAGGCGACTC AGGAGACTCTTCCATTGATCTTGCTGCTAACGTTCTGCTCAATAGATTATCTTTCCAGGTATTCCTTACATTATGGCCGG AGACAAATTTCTTTCTTCATGTTCTTTGTTATTCGAACAATGAAATTATAATTAAATTCTGGGCTTTAGTTCCTGTATTG TTGTTGGGAATAATGTTACTTTCACACCTCTAAGAGAGGTGGAAAGAGGTGGAATGAGGAGAGAGATAGGAAGAAAAGAA AAAATAAGAGAGAGAAAGTATGTGATGTGATAGATGATGAGAGGAGAGAGATAGAAATGAAAATAGGTGGAAATGAAGTG TTTAGATAATGAGGTGTCTACATATCATTATTGTTGTTGTTGGGTTTGGTGCTGATCCTCCCAATCCCTCCTCTTCTTGT TTTGCAGGTGCAAGAGGATCTCTCATCCCTCAAGAACATTGCAGGAGAAACTGGGAAGAAGCTTACCTCCTTGGCCTCCA CCTTAATGTCAGATTTTCAGGACCGGATCCTCTAAAATTATATGTTCTATAATTAAGAGAGTCTTTGGAGTTTGATGCAA ATACCACCACTTATGTTTCAAATGTAATATCAGGGTTCAGTATACAATTCTTTGATAAAATATAAAATAAGATGCTATAA TTTCTGGCTTGCCATTTAGGCAGTTTTTTTTATATGATGTACCAAAGGTACTTTTTGATGTTGCCAATATGTTTTTATGG TTTATACTTTATTCTTTTAATTAGTCAATATCAGTTTGTCACAAACTCGACAATGTCATCTTGTATAAATTAATGAAAAA GCTTTCTCGCTTACATTTTAAAACTAGTTTCCGTTTAATTACAGTAGTAAACCTTAATGGTTCAGTGTCGATTTTTTATG GAACACGGGAATAAAATTAACAGAACTATGC
CDS sequence (LotjaGi4g1v0171100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAGCTTTGGAGGAAATAACCGTGCTCAGGCTTTCTTTAAGCAACATGGTTGGACCGACGGTGGTAAAATAGAAGC CAAGTACACATCCAGAGCTGCAGAGTTGTATAAGCAAATTCTTTCAAAAGAAGTAGCCAAAAGTATGGCTGAGGTGGCTA GCTTGCCTTCATCAACTGCTCCTTCTCAGTCTGGTCAAGGGGCTAATGCACTTTCTGATGCCAGGACCAATGAAGTAATG AAAAAAAACATTCTGGAGAATCCAGAAAAGCTTGAAAGCACTTCGTCACCTCGAATTGCACGTTCAGTAATTTCAAGTAC TGTGAGAAAGCCTATCGGGACAAAAAAGACTGGGAAAGGCGGGGGACTTGGTGCCCAAAAGCTAACTAGAAAGCCAAGTG AATCTCTCTACGAGCAGAAGCCTGAAGAGCCACCTGCTCCGGTTGCATCCTCAACAAACAACATTATGCCTTCTCCTTCT GGACCATCTCGGTTCGAGTATGTAGAAAATGTTCAATCATCCGAGTTGTATTCTGGAAGTTCAGATGTAATAAGTCATGT GTCTGTACCAAAGTCATCAAGCTTCTTTGGAGACTTTGGAATGGATGGTGGCTTTCCAAAAAAGTCTGGGTCAAGTTCCT CAAAAGTTGAAATTCAGGAATCTGATGAAGCAAGAAAGAAGTTCTCAAATGCTAAATCTATATCTTCATCCCAATTTTTT GGAGACAATAAGGCTGCAGATGTGGAAGCGCGAGCTACTTTGTCAAAGTTTTCAGGTTCGAATGCCATCTCCAGTGCTGA TCTATTTGGAGGCGACTCAGGAGACTCTTCCATTGATCTTGCTGCTAACGTTCTGCTCAATAGATTATCTTTCCAGGTGC AAGAGGATCTCTCATCCCTCAAGAACATTGCAGGAGAAACTGGGAAGAAGCTTACCTCCTTGGCCTCCACCTTAATGTCA GATTTTCAGGACCGGATCCTCTAA
Protein sequence (LotjaGi4g1v0171100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSFGGNNRAQAFFKQHGWTDGGKIEAKYTSRAAELYKQILSKEVAKSMAEVASLPSSTAPSQSGQGANALSDARTNEVM KKNILENPEKLESTSSPRIARSVISSTVRKPIGTKKTGKGGGLGAQKLTRKPSESLYEQKPEEPPAPVASSTNNIMPSPS GPSRFEYVENVQSSELYSGSSDVISHVSVPKSSSFFGDFGMDGGFPKKSGSSSSKVEIQESDEARKKFSNAKSISSSQFF GDNKAADVEARATLSKFSGSNAISSADLFGGDSGDSSIDLAANVLLNRLSFQVQEDLSSLKNIAGETGKKLTSLASTLMS DFQDRIL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 47 | 47 | 2.98968E-20 | – | |
| Gene3D | 1 | 64 | 64 | 5.1E-8 | ||
| PANTHER | 2 | 327 | 326 | 3.6E-144 | – | |
| PANTHER | 2 | 327 | 326 | 3.6E-144 | – | |
| MobiDBLite | 56 | 75 | 20 | - | – | |
| MobiDBLite | 56 | 73 | 18 | - | – | |
| MobiDBLite | 85 | 165 | 81 | - | – | |
| MobiDBLite | 89 | 112 | 24 | - | – | |
| MobiDBLite | 146 | 165 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0171100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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