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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0182700 |
| Transcript ID | LotjaGi4g1v0182700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transmembrane protein (DUF616); TAIR: AT2G02910.1 transmembrane protein (DUF616); Swiss-Prot: sp|Q751V6|MGR1_ASHGO Mitochondrial inner membrane i-AAA protease complex subunit MGR1; TrEMBL-Plants: tr|A0A151RS61|A0A151RS61_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0182700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:38731861..38737369) extracted from Lotus japonicus Gifu genome v1.2.
GGACGACACACTCGCTCACTCACCCACAAAAAACTCTGCTTTTCACTGTCGGTGTCAGAAAAAAATCTCCGCAAGTTAGA AAACGTAAACGAAAATTTTCCGAAGGAGGAAACAAAAAAAGAAAACGAAAACAAAAACAAAAGTTGCAGACTTTTTTGCG ATTTTTAAAGTGCGGATCGTGATATTCGATTGAACCACCTGCCTTTAAACCCCGGCGTCTTCCTCAACGAATCAATTCTA CAGATACTCCTTCTGATTCAATTGTTCGAAGGATCCTTCTTTTATTACCATTTGACTGCGTGATCCTCAGTTCGGGAAGA TTTTCCATGCCCTACATTGTTCTTTTGATTAATCCCTGTAAGTTGTGTCGGACCATCTTTTCATTTCTCCTTTAGAGCTT TGAGATTCCTGTTTTCTTTTATTTTTTCTCATATTGGGAGGGAGTGAATGTAGTTTGTTTATTTATCTATTCTGTGGTAT GGCCCTTTCTTTGTTTTTCAATGGTGTCTAATCTTTGACGTTTACAATTTAAATGGATATCAATGATGAATGCAGAGTCA TTTACTCCAAAATAAAAGAGGTTTTAGGATAGTGTTTACATGATATTTCATTCTCTGATTTGCTTTTGGTATGAGGTTGT GGCATTTTCGTGAATGTTCTTTTATTTCAAGCTAGCTGCTTGGAGGGCTTAGAAGGATTGTTAGAGTCCCACATTGGCGA GAGATATCAAGTGCTTATAAAGGGTAGAACAACCCTCAACCCTCAACTTTTTAGTTGAGTTAGGCATCCCTAATTCTAAT ATGGTATCAGAGTCTGTCCTAGATCTATTTGTTGTGGAGACCTCCCACCCGTTGATGTTCATTCCACGCTCCAGATGTCC ACATTGGCTAGAGATATGACCAATCAAGTGCTTATAAATGGTAGAGCAACCCTCAACTCTTAAGCTAGCTTTTGGGTTGA GTTAGGCATCCCTAATTCTAATAAGGATTGTTCTTGGTTGACCAAGTTTATTTTGACATTTTCATGTATTTATTGTACAG AAATGGTAGAAACACCCTCTCTATAATTGGTCTATTGTTTAAAAAGTCAAAATTCTTGTAAAAGTTGTCAATTTTTAAAA ATGGACAAGAGGGTATGTTATGGCTGTCTAGCATGATTATATGACTTCTCATTTTTATTCGTGTAGTGCTTTTCTAATTG TTAAGTGTTTCTTTATGGCTATTGTTGGTTTAAAACTTCAGATTGAAGGTTGTCAAATTTTATGCATGCTTTAACATCTA AAGTATCTAACAATTTAAGCATACATGGATTTGTGTTGTAGAGTTTAGCTTACATATGATCATCAGCTGCCAACACGGGT GAGTTTTTTTGCTAACCACCTTTTTGGTGAATCTTCACAGTTTGTTACTGTTTTTTCTTAGTAGATGATCAGGTCTATGT CTGAATCTTGGGATGTGCTCTGGCATGGCTCTCTATAGAAACAATGGTGAGTTGTTCACCGAGAGACGAGGCGTCATTGA TGCAGTTCTCAGTTTTCTTGGTACGAGTGATCATGGCTCTAGAGTTTTACGTCGTGGTAGAAGGTTTGGTCGGATTACAA AACACAGACTTTCACGCTGGGTTTTCGTCCTGACGACACTCTTTTCAATTTGTTTAACACTTTATGGCCTGAAAATGTTT TATCAAGGTAAGGCCAGAGAAACACGGGCCTTTCTTCCTGATATTTTTGTAAGGTTATATACATATAGTTTCCTACTGTG AGTCATGTGTCAGAAAATCCGACTTGCTGGATTCTCACTTGTATTTCTCCCATTGATTTTGTTACAGCTAAAATGGAATC TAGGTTCTCAATTCATTATGATCTCCAAGAAGAACATAATCTCCAAGAAAATACTCTTGCATCTGATGTTGGAAAGCCAC CTAAAAGCAAGCGTCGAAAGCGTAAGTCATTTCCTTAAACCTCGTTTATCATTATATTTTGATATCTGAATTTAAAGTCA CACTTCAGTTAGATTCTTTAACCCGTCTCCCCCCCCTCCCCCGCCCCGTCCGTCTGTGAAAATTTGAAGATTTATTGACA AACTCAGTTTGCAAAATGCATTAGTCAAAGAAAGTGCAGAAACATTGGATACTTAATAAATAATATGCATTTTTATTGAG CAGCTATCCAGATGGTAACTTGGATCAAATTAAAGATCTACAAAAAGTTGTCATCAAGTGGTGTAGTATTTTAGGATAAT TGCAGATATAGGTTTCTTAAAGTCAAGCAAAAATACTTGATATTATGTGAATTATATTTACTTTGCTGGCCAAAGCTTAT TATGTATTTGGTCACTGATGTTGAGTTGGCATTATAATCATTAACATTTTGCAAATGATGTATGCTTTTGCGTTTGTTGA TTTCTAACAATTTCTAATGCTGGTGTTTCCCAAATTAAATGAACTGGAAAAAACCTGAGATTTTCAACTTCATGGTTACA TCACTTGCTAATGCATAAATTTTGTTGACTAAATTAACATGGTTCTAAATCTATCAGCACTATTTGGATTTATGTTCCTC GCTAAGCTGACTCATTAATCCTTCAGATTTTCCTTGTGAAGTTGGATTTCTGGAATCAGTCAATGGCCTTGTTGAACCTA AGAATTATATGAACTTCACATGGTTTTCTCTAGAGTATGTTGACCATGAAGAAAAATCATCAAATAATTTATTTGAACCT CGATTTGGAGGGCATCAGAGTCTAGAGGACAGAGAAAATTCGTTTTATGCAAAAAACCAAACAATTCATTGTGGTTTTGT CAAGGGGCCACCTGGATATTCAAGCACTGGGTTTGATTTAGATGAAAAAGATAAGGCATACATGTTCAGCTGTAAGTTTT CAGTCTCTTCTTGCATTTTTGGAAGCTCTGATTTTCTCCGGCGGCCTACAAGTAGACTGGTAATTCAGCAATTATTTATT TATTTATTAATCTGTTTTGTTTTGTACATTAGCCATAATGAGGAAAAGATAAGTTTTCAGTCTAGGCTTGCTTGATATCG ACATGCTGAAATGAAACCAAAATATCCAAATGTCAGATGATCTTTTTTAGATATGTTTAATTTTTTCCCTTCACTACCCT GGGTTTTGAAGAGTAATAAACAAAATTGCAGAAGATGGTGAAGACTAAAGAAACTTAAGAGAGAAGAAAGATGTAGAATG TATAGTGATAGTTCTTTCCACAAATTTGGCATTCTAGACATTGAATGTTGGGTGATTTGGTTTTCGTGAAATATTGATAA CTTTGTAACGGTGATATTTGATCTTTTAATCATCTGCACGTGCGATATGCTATACCGTAGTGGAACTTAAATATTCACCT GGACCGTATGATTATGATATATCGCATGTTGGCTTTATAAAGCATTTTTAGATTATATAGGAATTAATATATATGTCTCT TTGCCGCAGATCAGTCAATATTCAAAGGAAAATGTTTGTTTTGTTATGTTCATGGATGATCAAACACTGTCCAAACTTTC ATCCGAAGGAAACAGTCCTGATGATAGAGGATACATTGGCTTGTGGAAAGTAGTTGTTGTAAAGAACTTGCCATATGAGG ACATGCGAAGAACTGGCAAGGTGCCAAAATTTTTATCACATCGTCTCTTCCCAAATTCTAGGTAGTTCTTGTAATCTGTT CTAACTTCCAAGATTCTCAGTTTCTATTCCTCATTTTAATGTTATTTAAAAATCCTTGCTTGGCAGATATTCAATTTGGC TTGACAGCAAGATGCGACTCACATCTGACCCTATGTTAATTATTGAATATTTTTTGTGGCGAAGGAAGGCAGAGTATGCC ATTTCAAATCATTATGATCGCCACAGTGTCTGGGAGGAGGTACTCCAAAATAAGCGCTTAAATAAGTATAACCATACAGC AATTGATGAACAGTTCAACTTTTACCAGTCTGATGGCTTCCTCGAGTTTGACCCATCAAGCCCAAATAATCCTCTTCCGA GTTGTGCGTCTCCTTCTCATCTTTCTTCATTATGGATGTTTGGTTGGGCGTTGCTTGTGAATACTAGGATTATAACTGTT GAATCTTTCTTGTTGTTGCAGATGTTCCTGAGGGTTCACTTATTGTTAGGGCGCATACACCAATGTCAAATTTATTTTCA TGTCTTTGGTTCAATGAAGTTGATCGATTTACATCTCGTGATCAATTAAGCTTTGCTTATACTTATTTGAAACTCAAGAG AATGAATCCAGAGAGGCTATTACAGCTATATATGTTCAAGGTGATCTTTTACTTGGGGAGAGGGGGGAGGGGGCGTTTTT CCTTCTGATTGGACAAGGATATAATTAACAAACTATCTCATACTGAATTAATATGAATATTGTTAATTTAGACAAATGTT TAATTTCAATCCTCTGCAAGTCGCCTAGGATTTTGGCAACAGCACACCTACTTGACATACTCTTATGTCACCTTCATTTA GTTATGCATACAGGCTTCTTCCTCCCCTAAAAAGGCAGTTTTACTGCATTTTGTGTTCCAATTTATTTTGGTTGTTGCTT CAAAAGCATTCATGTAGTCAAAGAGACTTAAAAAGTATGTTCATCCATCTATGCAGGATTGTGAACGCAGAGCATTAGTG AAGCTATTCCGTCACAGGGCAGTCCCTGTTTGATCAATTCCAGCTCTTTAAGGTGCCTTTTGCTGCCTCTTGACTCTGTG CTGTACAATTTGGCTGTTTTTCAGAGTCACCATACGAACTTGAACATATTATTCTTTGTACGGTTTCGCTAACTGTCATC CTTGATGAATTAGCTCACTCAAGTATATATGATATGACTTGAGGAGCTATCTGATCAATTTTGTAATGAGAGAATTAATG CCATTTGATGTCGCACCCGTTACTTGAATTTAGAAGATGAAGAGGCCTTCCTTAGGGTAAGCTCAGTACAGCTGATAGTT GGAAAATGAAAATTGAATGAATTGAAAATTTGGAATGAAAATAAACTGAAACTTGCTTGGTACTACGAAATTGGGAAAAT GAGAAAAATAGGATGTCTGTCTTTTTTTTTTGCACGCCTTATGACCACAGGAAATTCAAAACCTTTCAATGTATCTCCGA ATAATAGCTTAAGTGGTAAGAGCCGGGTGACATATGAGTTGGGGATGGGTAGGTCTAGGGATCAATCCCTGGAGGTGTAA TTTATCTTTGAAATGAAATGCCTCAATGTTGATATATGAGCTGGAATAAAGAGAAGAAAACTGAATTACTTAAGAAAAGG GGGATTCTTATTCTTGTAGCCATGATTCAAGAGTGATAGCGGATGCATTGTTGTGGCCAAGATTTGAACTCCATTATGGG GTTCGGTGAAAGTTTTGAGGGAAGGGCAAGTTCATAAAGATTTTAGTTTGTTCAGCTTCCTCGTGCTTTAGTTATGGGGA AGAGCGATTTTACTAACAAGTAAGATTAGTTTTCTTTCCTATTTGTGTAAACATGAGCAGGTCCTCCAC
CDS sequence (LotjaGi4g1v0182700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGCTCTGGCATGGCTCTCTATAGAAACAATGGTGAGTTGTTCACCGAGAGACGAGGCGTCATTGATGCAGTTCTCAG TTTTCTTGGTACGAGTGATCATGGCTCTAGAGTTTTACGTCGTGGTAGAAGGTTTGGTCGGATTACAAAACACAGACTTT CACGCTGGGTTTTCGTCCTGACGACACTCTTTTCAATTTGTTTAACACTTTATGGCCTGAAAATGTTTTATCAAGCTAAA ATGGAATCTAGGTTCTCAATTCATTATGATCTCCAAGAAGAACATAATCTCCAAGAAAATACTCTTGCATCTGATGTTGG AAAGCCACCTAAAAGCAAGCGTCGAAAGCATTTTCCTTGTGAAGTTGGATTTCTGGAATCAGTCAATGGCCTTGTTGAAC CTAAGAATTATATGAACTTCACATGGTTTTCTCTAGAGTATGTTGACCATGAAGAAAAATCATCAAATAATTTATTTGAA CCTCGATTTGGAGGGCATCAGAGTCTAGAGGACAGAGAAAATTCGTTTTATGCAAAAAACCAAACAATTCATTGTGGTTT TGTCAAGGGGCCACCTGGATATTCAAGCACTGGGTTTGATTTAGATGAAAAAGATAAGGCATACATGTTCAGCTGTAAGT TTTCAGTCTCTTCTTGCATTTTTGGAAGCTCTGATTTTCTCCGGCGGCCTACAAGTAGACTGATCAGTCAATATTCAAAG GAAAATGTTTGTTTTGTTATGTTCATGGATGATCAAACACTGTCCAAACTTTCATCCGAAGGAAACAGTCCTGATGATAG AGGATACATTGGCTTGTGGAAAGTAGTTGTTGTAAAGAACTTGCCATATGAGGACATGCGAAGAACTGGCAAGGTGCCAA AATTTTTATCACATCGTCTCTTCCCAAATTCTAGATATTCAATTTGGCTTGACAGCAAGATGCGACTCACATCTGACCCT ATGTTAATTATTGAATATTTTTTGTGGCGAAGGAAGGCAGAGTATGCCATTTCAAATCATTATGATCGCCACAGTGTCTG GGAGGAGGTACTCCAAAATAAGCGCTTAAATAAGTATAACCATACAGCAATTGATGAACAGTTCAACTTTTACCAGTCTG ATGGCTTCCTCGAGTTTGACCCATCAAGCCCAAATAATCCTCTTCCGAGTTATGTTCCTGAGGGTTCACTTATTGTTAGG GCGCATACACCAATGTCAAATTTATTTTCATGTCTTTGGTTCAATGAAGTTGATCGATTTACATCTCGTGATCAATTAAG CTTTGCTTATACTTATTTGAAACTCAAGAGAATGAATCCAGAGAGGCTATTACAGCTATATATGTTCAAGGATTGTGAAC GCAGAGCATTAGTGAAGCTATTCCGTCACAGGGCAGTCCCTGTTTGA
Protein sequence (LotjaGi4g1v0182700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCSGMALYRNNGELFTERRGVIDAVLSFLGTSDHGSRVLRRGRRFGRITKHRLSRWVFVLTTLFSICLTLYGLKMFYQAK MESRFSIHYDLQEEHNLQENTLASDVGKPPKSKRRKHFPCEVGFLESVNGLVEPKNYMNFTWFSLEYVDHEEKSSNNLFE PRFGGHQSLEDRENSFYAKNQTIHCGFVKGPPGYSSTGFDLDEKDKAYMFSCKFSVSSCIFGSSDFLRRPTSRLISQYSK ENVCFVMFMDDQTLSKLSSEGNSPDDRGYIGLWKVVVVKNLPYEDMRRTGKVPKFLSHRLFPNSRYSIWLDSKMRLTSDP MLIIEYFLWRRKAEYAISNHYDRHSVWEEVLQNKRLNKYNHTAIDEQFNFYQSDGFLEFDPSSPNNPLPSYVPEGSLIVR AHTPMSNLFSCLWFNEVDRFTSRDQLSFAYTYLKLKRMNPERLLQLYMFKDCERRALVKLFRHRAVPV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 52 | 52 | - | – | |
| PANTHER | 5 | 466 | 462 | 1.1E-234 | – | |
| PANTHER | 5 | 466 | 462 | 1.1E-234 | – | |
| TMHMM | 53 | 72 | 20 | - | – | |
| Phobius | 53 | 73 | 21 | - | – | |
| Phobius | 74 | 468 | 395 | - | – | |
| Pfam | 145 | 463 | 319 | 1.3E-144 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0182700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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