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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0188700 |
| Transcript ID | LotjaGi4g1v0188700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aluminum activated malate transporter family protein; TAIR: AT4G17970.1 aluminum-activated, malate transporter 12; Swiss-Prot: sp|O49696|ALMTC_ARATH Aluminum-activated malate transporter 12; TrEMBL-Plants: tr|G7JGH1|G7JGH1_MEDTR Aluminum activated malate transporter family protein; Found in the gene: LotjaGi4g1v0188700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:42996223..42999790) extracted from Lotus japonicus Gifu genome v1.2.
TCACTTCTCACTTCTCAGCATCATTCATCTAGGATCCCCATTATCTCACTAAAATATTTTTCCCTTTCCATTTTTTCAAA GATATTTCCTGTTATAGATAGAGCTACATGCTTTTGGGCTGAAACAGCAAGCACTATTTGAGAAGCATCAATGGTTCCTA AAGTTCTTGCTGGTTTTGAAACGGCAATGGCTGAGAATGAGAGTGGAAGAATCATTGGGAATTGGAAGAAACGTGTGCAT GTTTTCTGTGAGAAGTTGAGAAGGTTCCCAAGTTTGGCTTGGAAGACTACATGGAAGGTGGGACATGATGACCCAAGAAG GGTGATCCATGCATTCAAAGTGGGTTTGTCTCTGACTCTTGTGTCTTTGTTGTATCTGTTGGAGCCACTCTTCAAAGGGA TTGGCCAGAATGCTATTTGGGCTGTCATGACGGTCGTGGTGGTGTTTGAGTTTACCGCAGGTCAGAATAGCTTATAATCT ACCTATAAGCAATTTTGAATTTATTTTTAATAGGTCTTCATATTTGTTTATGCATAAGCCTATATATCTATCTATAGCCT ATATATTTTGAGTTATTTGCAATAAGTTAATCAAATTAGTTTATAAATAAGTGTTTATGCAAGTAATGTTTAATTAAACT GTTTATCCAAACACACTCATGATCTTGATTTCTAACTTCATTGCAGGGGCAACTTTATGCAAAGGGCTCAACAGAGGATT GGGGACACTAATAGCAGGATTATTGGCTTTTCTTATTAAGTGTGTGGCAAATGCATCTAGTCAGATTGTTCAAGCTGTTT TCATTGGAGCTGCAGTTTTTATAGTAGGTATAAGGATTGAACTTTAGTATATATGATGAATGATGAATGAAACATCAATG ACCAACATAAGTATATATTTAAGATTGTTTATGAAGGCTTATGAATATTTGATGCAGAATGAGACTTCGTAGCATATAGT ATTCCTTATAATTTTATACCTAAGATAAATTTGATTTATTACAAGCTCATAAGAAATTCAAGGCAATAAAATTCAGAATT AATTAAGTTTAAGAAGTACAAAATCTCATTAGTCATCATTCAAACTTCACCTTTTTTATTTCACTATCTCCTAGTTAGAC TTCAGGCCTCAATTCTAACAAAAGAAAAGAAAAAAATTTGATCTAAAAATATTTTGTTATTCTGTCATTTTGTTCTGGCA GGTGCTGCAGCCAGTTACATGAGGTTCTTTCCATACATAAAGAAGAATTATGATTATGGTGTGGTTATATTTCTCTTGAC CTTCAACTTGTTAACGGTTTCGAGTTACCGGGTTGAGAATGTCTTGAAGATTGCACATGAACGCTTCTACACCATAGCCA TAGGCTGTGCCGTTTGCCTTCTGATGAGTCTGTTGATATTTCCCAATTGGTCAGGGGAAGACCTCCATCATTCTACAGCT TTCAAGCTTGAAGGCCTAGCCAAATCTATAGAAGGTATGCAAAATCATCTTATATTTAGTTTCACAAATTCACAGCTTTT CATAATTTCCTTTCTCAAAACTCGAAATTCCACTTGCTTTTTATATAAAGCAAAAAACCAACCTCTTTTAACTGTGTAAA TTAGCACTCACAGTAGTAAAGGTAAAATCTTGCAGCTTGTGTCAATGAATACTTTTATGGAGAAATGGAAGCTTCTGGTG ATATGAACTCATCTGAGGATACCATATACAAAGGTTATAAAGCAGTTTTGGATTCCAAATCTACTGATGAAACTCTGGTA TGTCATCCATCTGCTTTTGGTTCATTTTGGAACTAGCATAAAAAACTTATCTTCAAGGGAATTATTGCATACACCAGATA CACACAATTCTTTTGCACTCAGAAAGTCAATATTAAATTATTGCATAAACTTCTGTGTCATACAAGTATTTTGCTTTTAA AATGATCATATATCTGTTGTCATTTAGGGATGAAAATCTTTTAACCCATTCTCTGTCTCATTTTCTTGTTCTACCAATAA AATTTTGCGATTTAAGGTAAAAAAAAAGACATGAATGAAGTGGTAACAAACTTACATAGATCATTTTTAGTGATATGGTA AACAAATTTAGGTGGGACACACAAGTAAAACACAATTGAGGGACATAAGATTTGATCAGTTTCTTAGTGTACTTAACTTA GCTCACAAGGTAGAAAAGAGTCGCTTGATACTGAGATGGTTCTCTTTTGAATTGTGCAGGCATTACATGCAAGTTGGGAA CCAAGGCACTCAAGATACTGTCATAGATTTCCATGGCAGCAGTATGTAAAAGTTGGAACTGTTCTTCGCCAATTCGGGTA CACCGTGGTAGCCCTACATGGCTGCTTGAGAACAGAAATTCAGGTAACACAAATTTAACCATTTATTTGGAGCTGCAATG CAACTGATCACACCTTAGCATCTCATTTGATACAAGAACAACCATACTTTTCAAACAGCATTGTAACTTACTACTTCATC TTCATACTAGCATTAGAAATGCACACTTAATGGCACTTCATAGCAATACAAAGTTATCAACACAAAAATAGTAGTAACTC TTCATATACAAACACTTGGAAACTAGAAAGAACACATAAAACAATGAGCAGTTCTGCAATTCAACTGACTGTAAAATCCA AACTTTGATATTTTCTTCCAGACCCCACAATCTGTTCGAGTTCTATTCAAGGACCCTTGCATCAGGCTAGCAGCAGAGGT ATCAAAAGCACTTACAGAACTCGCCAACAGCATAAGAAGCCGCCGCCATTGCTCCCCGGAGATTCTCTCCGATCACCTCC AAGAAGCCTTACAGGACCTCAACACCGCGTTAAAATCACAACCGCGCCTCTTCTTAGGCTCCAACGACAGCCAAGCCAAC AACATGCTCGCCATTGCAGCAGCAACAACAACACAGACAAACACAAAGGGGTCGATTTCAAGCGTGAAAACCGATTCCTC TGCATTGCTGGATTGGAAAACCAAAAGGGGTTGTTCCATGTCGGGTGAACAGGGAAAGGAAGCAGAACGCAAGGTGCTGA GATCGCAGATGAGTAAACTCGCCATCACGAGCCTTGAATTCTCTGAAGCTTTGCCTTTTGCTGCGTTTGCGTCTTTGCTT GTGGAAACGGTGGCGAAGCTTGATCTTGTTATTGAGGAAGTTGAAGAGTTGGGGAGGTTGGGTTGCTTCAAGGAGTATAG AGATGGTGATGAGTTTTCTGTGGTTTGTGAGAAACCAAGAGTTGATGTGTTGGAGAATCATTTACCTTCTCATGCAGGGG ATTAGAAGAGGCTAGGAAGTGCATTATTCTTTCATGGATATGGATTATTTTTTACTACTTGAATGAATAAATGTGGATGG TATGGTATTCATTATGTTTTTTACTCAAAATTGATAATTGAATATGACATAATATTTGAGGTTACAAAATGGCTACATAC ATGTTTGGATGCACGTTAGATTTTTAAGTTGGAAGAAGAATTGATTCTCAAGAAACTACTCCAAGTAGTGTTGTGAGAAC AGTATTAATTCTCATAAATGAATTCAAATATGCTACTATCTTATTGAG
CDS sequence (LotjaGi4g1v0188700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCCTAAAGTTCTTGCTGGTTTTGAAACGGCAATGGCTGAGAATGAGAGTGGAAGAATCATTGGGAATTGGAAGAA ACGTGTGCATGTTTTCTGTGAGAAGTTGAGAAGGTTCCCAAGTTTGGCTTGGAAGACTACATGGAAGGTGGGACATGATG ACCCAAGAAGGGTGATCCATGCATTCAAAGTGGGTTTGTCTCTGACTCTTGTGTCTTTGTTGTATCTGTTGGAGCCACTC TTCAAAGGGATTGGCCAGAATGCTATTTGGGCTGTCATGACGGTCGTGGTGGTGTTTGAGTTTACCGCAGGGGCAACTTT ATGCAAAGGGCTCAACAGAGGATTGGGGACACTAATAGCAGGATTATTGGCTTTTCTTATTAAGTGTGTGGCAAATGCAT CTAGTCAGATTGTTCAAGCTGTTTTCATTGGAGCTGCAGTTTTTATAGTAGGTGCTGCAGCCAGTTACATGAGGTTCTTT CCATACATAAAGAAGAATTATGATTATGGTGTGGTTATATTTCTCTTGACCTTCAACTTGTTAACGGTTTCGAGTTACCG GGTTGAGAATGTCTTGAAGATTGCACATGAACGCTTCTACACCATAGCCATAGGCTGTGCCGTTTGCCTTCTGATGAGTC TGTTGATATTTCCCAATTGGTCAGGGGAAGACCTCCATCATTCTACAGCTTTCAAGCTTGAAGGCCTAGCCAAATCTATA GAAGCTTGTGTCAATGAATACTTTTATGGAGAAATGGAAGCTTCTGGTGATATGAACTCATCTGAGGATACCATATACAA AGGTTATAAAGCAGTTTTGGATTCCAAATCTACTGATGAAACTCTGGCATTACATGCAAGTTGGGAACCAAGGCACTCAA GATACTGTCATAGATTTCCATGGCAGCAGTATGTAAAAGTTGGAACTGTTCTTCGCCAATTCGGGTACACCGTGGTAGCC CTACATGGCTGCTTGAGAACAGAAATTCAGACCCCACAATCTGTTCGAGTTCTATTCAAGGACCCTTGCATCAGGCTAGC AGCAGAGGTATCAAAAGCACTTACAGAACTCGCCAACAGCATAAGAAGCCGCCGCCATTGCTCCCCGGAGATTCTCTCCG ATCACCTCCAAGAAGCCTTACAGGACCTCAACACCGCGTTAAAATCACAACCGCGCCTCTTCTTAGGCTCCAACGACAGC CAAGCCAACAACATGCTCGCCATTGCAGCAGCAACAACAACACAGACAAACACAAAGGGGTCGATTTCAAGCGTGAAAAC CGATTCCTCTGCATTGCTGGATTGGAAAACCAAAAGGGGTTGTTCCATGTCGGGTGAACAGGGAAAGGAAGCAGAACGCA AGGTGCTGAGATCGCAGATGAGTAAACTCGCCATCACGAGCCTTGAATTCTCTGAAGCTTTGCCTTTTGCTGCGTTTGCG TCTTTGCTTGTGGAAACGGTGGCGAAGCTTGATCTTGTTATTGAGGAAGTTGAAGAGTTGGGGAGGTTGGGTTGCTTCAA GGAGTATAGAGATGGTGATGAGTTTTCTGTGGTTTGTGAGAAACCAAGAGTTGATGTGTTGGAGAATCATTTACCTTCTC ATGCAGGGGATTAG
Protein sequence (LotjaGi4g1v0188700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVPKVLAGFETAMAENESGRIIGNWKKRVHVFCEKLRRFPSLAWKTTWKVGHDDPRRVIHAFKVGLSLTLVSLLYLLEPL FKGIGQNAIWAVMTVVVVFEFTAGATLCKGLNRGLGTLIAGLLAFLIKCVANASSQIVQAVFIGAAVFIVGAAASYMRFF PYIKKNYDYGVVIFLLTFNLLTVSSYRVENVLKIAHERFYTIAIGCAVCLLMSLLIFPNWSGEDLHHSTAFKLEGLAKSI EACVNEYFYGEMEASGDMNSSEDTIYKGYKAVLDSKSTDETLALHASWEPRHSRYCHRFPWQQYVKVGTVLRQFGYTVVA LHGCLRTEIQTPQSVRVLFKDPCIRLAAEVSKALTELANSIRSRRHCSPEILSDHLQEALQDLNTALKSQPRLFLGSNDS QANNMLAIAAATTTQTNTKGSISSVKTDSSALLDWKTKRGCSMSGEQGKEAERKVLRSQMSKLAITSLEFSEALPFAAFA SLLVETVAKLDLVIEEVEELGRLGCFKEYRDGDEFSVVCEKPRVDVLENHLPSHAGD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 521 | 521 | 2.0E-300 | – | |
| Phobius | 1 | 57 | 57 | - | – | |
| PANTHER | 1 | 521 | 521 | 2.0E-300 | – | |
| Pfam | 48 | 501 | 454 | 1.3E-174 | ||
| TMHMM | 58 | 77 | 20 | - | – | |
| Phobius | 58 | 77 | 20 | - | – | |
| Phobius | 78 | 88 | 11 | - | – | |
| TMHMM | 84 | 106 | 23 | - | – | |
| Phobius | 89 | 108 | 20 | - | – | |
| Phobius | 109 | 114 | 6 | - | – | |
| TMHMM | 111 | 130 | 20 | - | – | |
| Phobius | 115 | 134 | 20 | - | – | |
| Phobius | 135 | 139 | 5 | - | – | |
| TMHMM | 137 | 159 | 23 | - | – | |
| Phobius | 140 | 157 | 18 | - | – | |
| Phobius | 158 | 168 | 11 | - | – | |
| TMHMM | 169 | 186 | 18 | - | – | |
| Phobius | 169 | 187 | 19 | - | – | |
| Phobius | 188 | 198 | 11 | - | – | |
| Phobius | 199 | 217 | 19 | - | – | |
| TMHMM | 199 | 221 | 23 | - | – | |
| Phobius | 218 | 537 | 320 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Malate transport | The directed movement of malate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi4g1v0188700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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