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LotjaGi4g1v0189000.1

Overview

Field Value
Gene ID LotjaGi4g1v0189000
Transcript ID LotjaGi4g1v0189000.1
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2C family protein; TAIR: AT2G35350.1 poltergeist like 1; Swiss-Prot: sp|O82302|P2C29_ARATH Protein phosphatase 2C 29; TrEMBL-Plants: tr|G7JGI0|G7JGI0_MEDTR Protein phosphatase 2C family protein; Found in the gene: LotjaGi4g1v0189000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:43016947..43023727) extracted from Lotus japonicus Gifu genome v1.2.

AACCGTCAACTCATAATCAGACCCAACAACTTCACACTCAACAAAGAAAAAAGGAAAAAGCCACACAAACAGACAAATCA AACAACAAATTTTCAACTCTCTCTTTTCTTTCTTCCCTCTCCTCCTCACTTTCCTCGTTTTGTTTTCTTTTCTTTTTCCT CACTCACTCACTTCACTTCACTTCTTTCTTTTCTTTCCTTCCTTTTTCCTTTCCTTTTCCTTTTCTCTCTCATTTTTCTT TTCTTTCTCCCTCTCTCCCTCCCCTAAGTCCCTTTCTCTAGTTTTTGGATTGGACTTTGGGGTTGGGGTCACTCATTTTC CCTCTCAACACCTCGCCGGAAAATCACCTACGATTTTCTCGGCTGCCAAACGGGACAAAACACAAATGTGATTAATGGGT AGTGGACTCTCCAACCTGTGTTCCTGCTTTGAACCGGTGAACCGGGAAAACGGACCGGACCACCACCACGTCGTTGATTT CACGGCCACCGAGCCATTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTCAGATCCTCCGCTCGCTTCATCTCTCCGA CCCACTCCGATCGCTTCCTCTCACCTTCCACCTCGCTCCGGTTTTCCCCTTCCCATGACCACCGAGCAACCCGACCCGAA TTTCACGAGACCGGGTTCAAATCCATTTCCGGCGCCGCCGTTAGTGCTAACAGCTCTGTTCCCAAGACGGTTATTCAGCT AGAAGAGGACGCCGCCGCGGCGGATACTGTTGCCACCAAGGGTAGTATTGTCAATGGGTTCGAGAGCACGTCGTTGTTCA GCGCTCTCCCGCTTCAGCCCGTGCCGCGAGGGGGGGAGCTTCTCGAGGGCGGTGGCGGGTTCTTCCTCTCCGGGCCAATT GAGAGTGGGGCGCACTCTGGACCGATTCACGGCGGTGCCGGAGGCGACAGCAGCGGTATCTCCGGCGGCGGGGATATTCC ATTTTCTGCGCCGCTTGGGGGGATGTACGCGAGGAAGAAGAAGCTGAAGGGTGTGTCGGGGTTCCGGAAGGCGTTTCAAC GGAAGGTGCCGGATAAGAAGCGGCCGTGGGTGGTGCCGGTGCTGAACTTCGTTGGGAGGAAGGAGGTTGCGGTGACCGAG GAGAAGCATCCGGCGGCGGTGGAGGCGAGGAGCGAGAGCAATAGCAACGTACAGTGGGCGCTTGGGAAGGCCGGGGAGGA TCGGGTTCATGTGGTGGTGTCGGAGGAGCAGGGGTGGTTGTTCGTAGGGATATACGACGGTTTCAACGGCCCCGACGCGC CGGAGTTTCTGATGGGTCATCTCTACCGCGCCGTTCACAACGAGCTTCAGGGTTTGTTCTGGGAAGTCGAAGAAGAAGCA GCTCAGGAGAGCAACCTTGCAGGGCAGAGCGTAGCTGAGGTGAAGAGCAAGGAGGGAGAAGGTGAAGATTCGGGTTCTGC TTCGGCGAAGATGGTAGTGCAGGGAGCTGTAACGGGAACCGAGAGTAGACGGCGTAGATTGTGGGAGCTTCTCGCTGAAG ACCCCGAAGATGGACTCGATCTTTCTGGGTCTGACAGGTTTGCGTTTTCTGTTGACGATGCAGTCAGCGTTAGCAATGCC AATGCGGGTTCTGCAGTTAGCAGACGGTGGCTGTTGTTGTCAAAACTGAAACATGGGTTGACAAAGCACAAGGAGGGTCA TGGTAAGAAGTTGTTACCGTGGAATTTGGGGACGGAGGAGAAAGAGAAGGTGGAGGTGGAGAGTAATAGGGTGGAAGACC AGCCTAGTGGTGGCGGTGGTGGTGGGAAGAGGCGGAAAGTAGGTCCCGTGGATCATGATCTGGTTTTGAGTGCGCTGTCT CGGGCATTAGAAGTAACGGAGCTTGCATATTTGGATATGACGGATAAGCTTCTCGACACAAATCCGGAACTTGCTTTGAT GGGTTCTTGTCTATTGGTTGCTGTTATGAGGGATGAGGATGTCTATGTGATGAATGTTGGGGATAGCCGTGCTATTGTTG CACACTACGAGCCCAAGGAGGTTGCTTCTAATGTGGTGGAATCTGGGAACAAGGGAGATACCGGTTCCAGCACTGAGAGC ATTGTTGAGGAGCCCGTAGCTGAAAGTGCAATCAAGTTGGGGAATCAGCGTCGTGCTCAAGAAACGAGGTTGGTTGCATT GCAACTGTCTACTGATCACAGCACCAGCATTGAAGAAGTAAGTTCAACTTTCAAAACAGTCAGTCTTTTGATGAAATGAC ATGCTTTCTTCCTTCCTTTACTCTTGCAAGTTTGGTTTTTAACTACAAGTCTTACTTTTCCTTACTAATGCTTCCAGTCT GGTTCAACATTTTTCTCTGTTGATTACTGTAATGCTTCAATACCCTTAAAACTAGTGTCTAATGCCTTTACTAGGTTTCT GGTGCAGCCATTTGTTGCTAATGACATTCTTTTCCCCATTATGTTCTTCTATCCATCTAATACAGTATGTAGGTCCATAC TCCATACTTGAGTTCATGTGTGCGTGTCATTCTGTAAGTGCATTATATTCCAAGCATAGATTGGATTGTTTCTTTCGCTT ACAGATTGTCTGGTTCAAAAGTAGGGAGGGGGGGGGGTGGATAATCCTCTCCTTATTTGGTATCTAATGAGAGGGAGAGA AAATAAAACTCCCAAGGAGTGAGCTTCCGAATGCGAACGAACGGGGCAGGTAAAACACTAACACCGCAGGGAGCTAGAGC CATCCTTCTATTGCTATGGCAGATTGGAACGGCTTAACTCTCTATATACAAGCTTTTAGTTGCTTCTCGACAATTTTGTA GTAAATAATTCTAAATGTCCAATTTTACCAGTCTAATTCTAAGGGTTTTTATCAGCTGGGCTTATTGCTTATTACTCATT CCCATAACGAACAAATTCAAATTATGGTACCATAAATTAAAAGAATATAAAAAAATGAAGAACAGTAAACTCATGCACCA AACTGAGAGAAGGCAATTAAAATTATGCACCTAATGTGTAATAGGGTTGCTAGGGATAGAATACAAAGAGTGCAGTTTTG GATTTCTAAAGTCTAAACATAAGCTTGGACAATTTAATCACTATACTTTACATGTTTTAAATTCATTTCATCTCCCCTCC AAATCCCAAATATCACAGGGGAATCAAATTTGAGAGAGAAGGGATCTTGGATCCTCCCATCCAAAATTTTGAACCATACA AGAAAAGTCTCCCGCACTGAACACTGTTTGTCCAATATTTTTTATTATGCCAAGTGGCAGATGAAGTTTATGATTTAATA ACGTGCGTTGTTGAGATTTGAGATTGAGTAGTTTGTGATGATATATTCAAGAGGTTAGATCATTGGCTTCATGATTGTTT GCTGTTATTGTTTTAGTTATGAATATCACAAGTTATACTTTTAGTAGCAGTTGCAGCTGATAGCCTTTGTTTTCTTTTTC TTAAGTTGTGAGTGACCTGCTTATATCAGTTCTCTATTAAATAGTGCTTAATGTTTTACAGGAAATCATTAGAATTAAGA ATGAGCATCCTGATGATAACCAATGTATAGTCAATGATAGAGTTAAAGGCCGTCTTAAGGTCACCAGAGCATTTGGGGCA GGATTTTTGAAACAGGTATCTTTGAAAATACTTTGATCTATTATTACGGTTCATTTTCTTAAATTTATAAAATTTTACTT TGTGCTTCTGAGTGACTCTCCTTTCAGGGAGAAAAGAAAATGTTTGTTTCTATAGTTCATGCGATATGGAATAATATTTC AAGTTTTTTTTTGGTTATTGTCCTTATAGATTTGAAATTTATCTTGCTTCGTACCTTTTATTTATTTTAAGTGTGTGCTT GTGTGCATGCATACATGTATTTGTATGTACTCGCGCACACTGTAAATACACATATGCAAATAGATGAGGATTTTAACAGA GGCGTGAAGCAGTGAACAAATTTATATGCATAGGTACACTGATTTTAAGAACATGGAAATCATATTGTTCATGATCATTT TGTATTTTTATAATTAAATTTTGGTATGGCAGATATTTAGTTCATATTAGTTATTGTGTCAAATTGAAATATCTATCAGA TTGTAAAACTTTTCTGCGTACTCAGCCAATGGTGAAAGGGTGAAATTACAAAACTTGTCTCTTGAATTTGTATATATTCA AAAGTTTTCTTTGGATGCTGTAATGATATATAGTGAACTATATAGATGTAAGCTAAATAGGGTCCAACCATTTGTCTTCA GTCTCACAATACACATTTGGTTTTAAAACGAGGAGAGGAGTAATAAAGGTCAATTGTTGGGAGAACTTGCTGCATTACAT ACTGACGCTCAGCCTTGAATAATTTATTTGTCATCAAACTCACTTTTATTGTGTTTATTGAACTGCTTCACATACTGATG CTCGTCTACGCTTGAGAAGCCTGATTGTTTCTGATGTCTCTTAAATATTTAGCCCAGATGTATTCTTACATGATGGTTGA ATTGAATTTTTTTTTTGTAGCCAAAGTGGAATGAGGCAGTTCTAGAAATGTTTCGTAATCACTATATTGGCACTGCTCCA TATATATCCTGCTGTCCTTCGCTGCGTCACCATAAGTTATGCCCAGAAGATCAGTTCCTGATCCTCTCATCTGATGGTTT ATATCAATATCTAAACAACGAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTCCCAGAAGGAGACCCTGCCC AACATTTGATAGAAGAACTGCTCCTCCGTGCCGCCAAGAAGGCTGGTAAATGAATCTTCAGACCTTGTCTATCTTTCTTG TTCTGCAGGCATGTACAATTTGTTGAACATAAGTAGAGGGAATATTAATTAGTAATTCTTTAGATAAGAATGCAAAGCAT TTTCCTTGCCCCATATGGTTGTGCAAAATAATTGAAGAATAAACTGATGGTAAATTTTAAGAAATAAACACTAAGGTAGC GTTAGTTAGACATGTTAAAAATGACAGAACATAACATATAGGTTCTATTTTATGTTTTGTCATTAGTGCATCTTAAGAGT ATAATAGTATATGTCATGAAGTGAAAAAAAAGAACAAAACAACTTGTTCCGTTCGTTTCATCCCTTGCCGAATGCTACCT AATTTTTGTTACATGTTGAGATTGAAGGATTTGGAATTCTTTTCTACATTTGGTGCTAGGAGCTTTGTAATTATGTTATT AAATTTCTTTTTCCTTACTGCTGTTTAACATGTCCTCTTGTCCATCAGGGCTCTTTTCTATTAAAATGTTGTCCCACAAA GAAACGCATCATCTTTAAGTGGGAATTAGTCTTTAAAAAGTATAAATTTTGCATTCTATTGAGCTTCTGGTCCACTGCTT TGGTTGTCTGTAGCTTTGATGCAGCAGCTACCATATAATCCCTTATTTCAAATGATGACTTCTTTGCATATTCATCCTTT TTTACAGAAAATCCTATCCGTAACTTTGTCCTCTATATGGGTTGTATACAAACTACAAAGTCATTTTCAAAGGATTACTT TAGTTAGTCAATACCCAAGCTTTGCCGTTTTCTATTTATGTATTTGTTCAATTTTCTTTTGATCTAGAATTTGGTTGAGG TAACAGTTTTGCCATCGGGAGGGTTGCTGTGTCTGTTTGCATTTGTTTGTTTGCTTCTCGTATTTGGAGAAAACTTGTTT TAGAAACATCTGATGCGCACTAGTTTTTTGTTTTTCTATAATGAAGAAAATCAGACAAGCGAAGAAAGAATTACTGCATG CAATATGTCGATTCATATTCATTTATAGCTAAATGTGTTTTAGCTTGTCTTCTGTGTTTGTACTACCCAATTAGAGTGGT GACTTTGGACTAAATTGTTTCAGGAATGGACTTTCATGAATTGCTGGATATCCCACAAGGAGATCGGAGGAAGTATCATG ATGATGTTACTGTTATGGTGATATCACTTGAAGGGAGAATCTGGAAATCTTCAGGAAAATATCTATAATACATTCAACCT CGAAGATGATGCCAAAGTTTCACAGCTGGATCCATTTTTCATGGATCTGGGTTTTTTTTCCTCTGGTCTTAAAACCAAAA GTGATCAACTGAGGAATCTCAGATTTTAATGGCAGGTGGCCACCTTTAGAGCTCTATCCAGAATTAAAGATGCTGAATGC ATTTAGGTATGAGCTATATCAGAATGGACCTTGCTGATGGGCTTTTGGGAATTTTCGTTAGGAGTGGAGAAAAAAGTATA GCCTTTTAAACTGTTTTCTTTTTGTTTCGCGGTTTCCATTCTCCCTCTCCCCCTTTTTTGCCAGTTATAGAGATGAAAAA ATGATAGAAATTTTGCATAGCGAAGGCCCTTTCTATTTATTTTTCTTTATTTTTCTGTTTTTTTCTCTGGCAAGTGCCAA GGAAAATGTGGGTGTACATTGGTGGGGATACAAGTGTAGTGATTGAACTCGAGCGGTCCTTAGTCAGAAATGACAATCTG TAACTGAGGGTGGATTTCCACCGTAGCAAATTAACATGATTTAAATTAGAGTTCTCTTAAATCTTAATCAAATGGAATTA TAAATTGCAGAACGCAGAGTGAATTAGATGGTTCGTAAACCAAAAACGGAACTGGACATTGATTCGTTAATGTCCTTGTG TTTTAGTTCGAGTTAGAGTATGTGCGTATTTTTAAGCTGAATGTAAATGAAGTGTTAACTTCCTTGCACATATTTTTCTT CGGAAATTGAGATTTATAGTGAAGTGGAAGTTATAAAATGGATTTTTTCTTGTGATTTCCA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0189000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTAGTGGACTCTCCAACCTGTGTTCCTGCTTTGAACCGGTGAACCGGGAAAACGGACCGGACCACCACCACGTCGT TGATTTCACGGCCACCGAGCCATTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTCAGATCCTCCGCTCGCTTCATCT CTCCGACCCACTCCGATCGCTTCCTCTCACCTTCCACCTCGCTCCGGTTTTCCCCTTCCCATGACCACCGAGCAACCCGA CCCGAATTTCACGAGACCGGGTTCAAATCCATTTCCGGCGCCGCCGTTAGTGCTAACAGCTCTGTTCCCAAGACGGTTAT TCAGCTAGAAGAGGACGCCGCCGCGGCGGATACTGTTGCCACCAAGGGTAGTATTGTCAATGGGTTCGAGAGCACGTCGT TGTTCAGCGCTCTCCCGCTTCAGCCCGTGCCGCGAGGGGGGGAGCTTCTCGAGGGCGGTGGCGGGTTCTTCCTCTCCGGG CCAATTGAGAGTGGGGCGCACTCTGGACCGATTCACGGCGGTGCCGGAGGCGACAGCAGCGGTATCTCCGGCGGCGGGGA TATTCCATTTTCTGCGCCGCTTGGGGGGATGTACGCGAGGAAGAAGAAGCTGAAGGGTGTGTCGGGGTTCCGGAAGGCGT TTCAACGGAAGGTGCCGGATAAGAAGCGGCCGTGGGTGGTGCCGGTGCTGAACTTCGTTGGGAGGAAGGAGGTTGCGGTG ACCGAGGAGAAGCATCCGGCGGCGGTGGAGGCGAGGAGCGAGAGCAATAGCAACGTACAGTGGGCGCTTGGGAAGGCCGG GGAGGATCGGGTTCATGTGGTGGTGTCGGAGGAGCAGGGGTGGTTGTTCGTAGGGATATACGACGGTTTCAACGGCCCCG ACGCGCCGGAGTTTCTGATGGGTCATCTCTACCGCGCCGTTCACAACGAGCTTCAGGGTTTGTTCTGGGAAGTCGAAGAA GAAGCAGCTCAGGAGAGCAACCTTGCAGGGCAGAGCGTAGCTGAGGTGAAGAGCAAGGAGGGAGAAGGTGAAGATTCGGG TTCTGCTTCGGCGAAGATGGTAGTGCAGGGAGCTGTAACGGGAACCGAGAGTAGACGGCGTAGATTGTGGGAGCTTCTCG CTGAAGACCCCGAAGATGGACTCGATCTTTCTGGGTCTGACAGGTTTGCGTTTTCTGTTGACGATGCAGTCAGCGTTAGC AATGCCAATGCGGGTTCTGCAGTTAGCAGACGGTGGCTGTTGTTGTCAAAACTGAAACATGGGTTGACAAAGCACAAGGA GGGTCATGGTAAGAAGTTGTTACCGTGGAATTTGGGGACGGAGGAGAAAGAGAAGGTGGAGGTGGAGAGTAATAGGGTGG AAGACCAGCCTAGTGGTGGCGGTGGTGGTGGGAAGAGGCGGAAAGTAGGTCCCGTGGATCATGATCTGGTTTTGAGTGCG CTGTCTCGGGCATTAGAAGTAACGGAGCTTGCATATTTGGATATGACGGATAAGCTTCTCGACACAAATCCGGAACTTGC TTTGATGGGTTCTTGTCTATTGGTTGCTGTTATGAGGGATGAGGATGTCTATGTGATGAATGTTGGGGATAGCCGTGCTA TTGTTGCACACTACGAGCCCAAGGAGGTTGCTTCTAATGTGGTGGAATCTGGGAACAAGGGAGATACCGGTTCCAGCACT GAGAGCATTGTTGAGGAGCCCGTAGCTGAAAGTGCAATCAAGTTGGGGAATCAGCGTCGTGCTCAAGAAACGAGGTTGGT TGCATTGCAACTGTCTACTGATCACAGCACCAGCATTGAAGAAGAAATCATTAGAATTAAGAATGAGCATCCTGATGATA ACCAATGTATAGTCAATGATAGAGTTAAAGGCCGTCTTAAGGTCACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCA AAGTGGAATGAGGCAGTTCTAGAAATGTTTCGTAATCACTATATTGGCACTGCTCCATATATATCCTGCTGTCCTTCGCT GCGTCACCATAAGTTATGCCCAGAAGATCAGTTCCTGATCCTCTCATCTGATGGTTTATATCAATATCTAAACAACGAAG AAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTCCCAGAAGGAGACCCTGCCCAACATTTGATAGAAGAACTGCTC CTCCGTGCCGCCAAGAAGGCTGGAATGGACTTTCATGAATTGCTGGATATCCCACAAGGAGATCGGAGGAAGTATCATGA TGATGTTACTGTTATGGTGATATCACTTGAAGGGAGAATCTGGAAATCTTCAGGAAAATATCTATAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0189000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGSGLSNLCSCFEPVNRENGPDHHHVVDFTATEPLDETLGHSFCYVRSSARFISPTHSDRFLSPSTSLRFSPSHDHRATR PEFHETGFKSISGAAVSANSSVPKTVIQLEEDAAAADTVATKGSIVNGFESTSLFSALPLQPVPRGGELLEGGGGFFLSG PIESGAHSGPIHGGAGGDSSGISGGGDIPFSAPLGGMYARKKKLKGVSGFRKAFQRKVPDKKRPWVVPVLNFVGRKEVAV TEEKHPAAVEARSESNSNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHNELQGLFWEVEE EAAQESNLAGQSVAEVKSKEGEGEDSGSASAKMVVQGAVTGTESRRRRLWELLAEDPEDGLDLSGSDRFAFSVDDAVSVS NANAGSAVSRRWLLLSKLKHGLTKHKEGHGKKLLPWNLGTEEKEKVEVESNRVEDQPSGGGGGGKRRKVGPVDHDLVLSA LSRALEVTELAYLDMTDKLLDTNPELALMGSCLLVAVMRDEDVYVMNVGDSRAIVAHYEPKEVASNVVESGNKGDTGSST ESIVEEPVAESAIKLGNQRRAQETRLVALQLSTDHSTSIEEEIIRIKNEHPDDNQCIVNDRVKGRLKVTRAFGAGFLKQP KWNEAVLEMFRNHYIGTAPYISCCPSLRHHKLCPEDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPEGDPAQHLIEELL LRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF301
71 763 693 4.7E-193 –
PANTHER
PTHR13832
71 763 693 4.7E-193
IPR015655
ProSiteProfiles
PS51746
250 756 507 43.506
IPR001932
SMART
SM00332
252 754 503 3.4E-68
IPR001932
SUPERFAMILY
SSF81606
264 757 494 4.71E-48
IPR036457
MobiDBLite
mobidb-lite
327 358 32 - –
MobiDBLite
mobidb-lite
445 469 25 - –
CDD
cd00143
473 756 284 1.59678E-41
IPR001932
Pfam
PF00481
589 724 136 3.3E-22
IPR001932

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0189000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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